RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 DAZ3Q9NR90 486 aaKnown RBP5.44□□□□□ -1.54
TGFBR3-210ENST00000533089 EP400Q96L91 3159 aa5.44□□□□□ -1.54
TGFBR3-210ENST00000533089 SDK2Q58EX2 2172 aa5.44□□□□□ -1.54
TGFBR3-210ENST00000533089 COL4A4P53420 1690 aaPredicted RBP5.44□□□□□ -1.54
TGFBR3-210ENST00000533089 PROP1O75360 226 aa5.44□□□□□ -1.54
TGFBR3-210ENST00000533089 MDFICQ9P1T7 246 aa5.44□□□□□ -1.54
TGFBR3-210ENST00000533089 KIR2DL5BQ8NHK3 375 aa5.44□□□□□ -1.54
TGFBR3-210ENST00000533089 MED12Q93074 2177 aa5.44□□□□□ -1.54
TGFBR3-210ENST00000533089 TEX22C9J3V5 150 aa5.43□□□□□ -1.54
TGFBR3-210ENST00000533089 IGFL2Q6UWQ7 119 aa5.43□□□□□ -1.54
TGFBR3-210ENST00000533089 LYPD1Q8N2G4 141 aa5.43□□□□□ -1.54
TGFBR3-210ENST00000533089 DAND5Q8N907 189 aa5.43□□□□□ -1.54
TGFBR3-210ENST00000533089 AJUBAQ96IF1 538 aa5.43□□□□□ -1.54
TGFBR3-210ENST00000533089 PYGO1Q9Y3Y4 419 aa5.43□□□□□ -1.54
TGFBR3-210ENST00000533089 SPRY2O43597 315 aa5.43□□□□□ -1.54
TGFBR3-210ENST00000533089 CFPP27918 469 aa5.43□□□□□ -1.54
TGFBR3-210ENST00000533089 ZNRF2Q8NHG8 242 aa5.43□□□□□ -1.54
TGFBR3-210ENST00000533089 CACNA1BQ00975 2339 aa5.43□□□□□ -1.54
TGFBR3-210ENST00000533089 PSPHP1O15172 72 aa5.43□□□□□ -1.54
TGFBR3-210ENST00000533089 MYO7BQ6PIF6 2116 aa5.43□□□□□ -1.54
TGFBR3-210ENST00000533089 C4orf48Q5BLP8 95 aa5.43□□□□□ -1.54
TGFBR3-210ENST00000533089 KIF26BQ2KJY2 2108 aa5.43□□□□□ -1.54
TGFBR3-210ENST00000533089 ANGP03950 147 aaKnown RBP5.42□□□□□ -1.54
TGFBR3-210ENST00000533089 TRBV27A0A0K0K1C4 114 aa5.42□□□□□ -1.54
TGFBR3-210ENST00000533089 SHANK2-AS3Q9BTD1 123 aa5.42□□□□□ -1.54
TGFBR3-210ENST00000533089 ALPK2Q86TB3 2170 aa5.42□□□□□ -1.54
TGFBR3-210ENST00000533089 LRRK1Q38SD2 2015 aa5.42□□□□□ -1.54
TGFBR3-210ENST00000533089 SDHAF1A6NFY7 115 aa5.42□□□□□ -1.54
TGFBR3-210ENST00000533089 IGKV1-39P01597 117 aa5.42□□□□□ -1.54
TGFBR3-210ENST00000533089 IGKV1D-39P04432 117 aa5.42□□□□□ -1.54
TGFBR3-210ENST00000533089 WI2-2373I1.2A0A1W2PRP0 233 aa5.42□□□□□ -1.54
TGFBR3-210ENST00000533089 IGHV3-30P01768 117 aa5.42□□□□□ -1.54
TGFBR3-210ENST00000533089 IGHV3-33P01772 117 aa5.42□□□□□ -1.54
TGFBR3-210ENST00000533089 IGHV3-30-3P0DP02 117 aa5.42□□□□□ -1.54
TGFBR3-210ENST00000533089 IGHV3-30-5P0DP03 117 aa5.42□□□□□ -1.54
TGFBR3-210ENST00000533089 COL6A6A6NMZ7 2263 aa5.42□□□□□ -1.54
TGFBR3-210ENST00000533089 ABCA4P78363 2273 aa5.42□□□□□ -1.54
TGFBR3-210ENST00000533089 LECT2O14960 151 aa5.42□□□□□ -1.54
TGFBR3-210ENST00000533089 CFHR4Q92496 578 aa5.42□□□□□ -1.54
TGFBR3-210ENST00000533089 WT1P19544 449 aaPredicted RBP5.42□□□□□ -1.54
TGFBR3-210ENST00000533089 IL17DQ8TAD2 202 aa5.42□□□□□ -1.54
TGFBR3-210ENST00000533089 Q9H8V8 135 aa5.42□□□□□ -1.54
TGFBR3-210ENST00000533089 JMJD7-PLA2G4BH0Y9G9 81 aa5.41□□□□□ -1.54
TGFBR3-210ENST00000533089 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.41□□□□□ -1.54
TGFBR3-210ENST00000533089 I3L3M4 83 aa5.41□□□□□ -1.54
TGFBR3-210ENST00000533089 CDIP1Q9H305 208 aa5.41□□□□□ -1.54
TGFBR3-210ENST00000533089 FANCMQ8IYD8 2048 aa5.41□□□□□ -1.54
TGFBR3-210ENST00000533089 H0YGX0 51 aa5.41□□□□□ -1.54
TGFBR3-210ENST00000533089 COX7B2Q8TF08 81 aa5.41□□□□□ -1.54
TGFBR3-210ENST00000533089 NREPQ16612 68 aa5.41□□□□□ -1.54
TGFBR3-210ENST00000533089 PIK3CD-AS1Q5SR53 167 aa5.41□□□□□ -1.54
TGFBR3-210ENST00000533089 POLEQ07864 2286 aa5.41□□□□□ -1.54
TGFBR3-210ENST00000533089 DOPEY2Q9Y3R5 2298 aa5.41□□□□□ -1.54
TGFBR3-210ENST00000533089 A0A0J9YWU9 116 aa5.41□□□□□ -1.54
TGFBR3-210ENST00000533089 GPHB5Q86YW7 130 aa5.41□□□□□ -1.54
TGFBR3-210ENST00000533089 NOTCH4Q99466 2003 aa5.4□□□□□ -1.54
TGFBR3-210ENST00000533089 COX7A2LO14548 114 aa5.4□□□□□ -1.54
TGFBR3-210ENST00000533089 NANOS2P60321 138 aaKnown RBP5.4□□□□□ -1.54
TGFBR3-210ENST00000533089 PRR4Q16378 134 aa5.4□□□□□ -1.54
TGFBR3-210ENST00000533089 PIEZO1Q92508 2521 aa5.4□□□□□ -1.54
TGFBR3-210ENST00000533089 IGKV2D-26A0A0A0MRZ7 120 aa5.4□□□□□ -1.54
TGFBR3-210ENST00000533089 F8W735 103 aaPredicted RBP5.4□□□□□ -1.54
TGFBR3-210ENST00000533089 DEFB4AO15263 64 aa5.4□□□□□ -1.54
TGFBR3-210ENST00000533089 ATP5EP2Q5VTU8 51 aa5.4□□□□□ -1.54
TGFBR3-210ENST00000533089 MAPKAPK5-AS1Q8N8E1 139 aa5.4□□□□□ -1.55
TGFBR3-210ENST00000533089 FXYD5Q96DB9 178 aa5.4□□□□□ -1.55
TGFBR3-210ENST00000533089 DEFB112Q30KQ8 113 aa5.4□□□□□ -1.55
TGFBR3-210ENST00000533089 NFE4Q86UQ8 179 aa5.4□□□□□ -1.55
TGFBR3-210ENST00000533089 RNF138Q8WVD3 245 aa5.4□□□□□ -1.55
TGFBR3-210ENST00000533089 PROK2Q9HC23 129 aa5.4□□□□□ -1.55
TGFBR3-210ENST00000533089 FREM3P0C091 2139 aa5.4□□□□□ -1.55
TGFBR3-210ENST00000533089 NDUFA4O00483 81 aa5.4□□□□□ -1.55
TGFBR3-210ENST00000533089 DEFB136Q30KP8 78 aa5.4□□□□□ -1.55
TGFBR3-210ENST00000533089 SCXQ7RTU7 201 aa5.4□□□□□ -1.55
TGFBR3-210ENST00000533089 NOP10Q9NPE3 64 aaKnown RBP5.4□□□□□ -1.55
TGFBR3-210ENST00000533089 CCL24O00175 119 aa5.39□□□□□ -1.55
TGFBR3-210ENST00000533089 TRIAP1O43715 76 aa5.39□□□□□ -1.55
TGFBR3-210ENST00000533089 FOXL2NBQ6ZUU3 175 aa5.39□□□□□ -1.55
TGFBR3-210ENST00000533089 PRR15LQ9BU68 103 aa5.39□□□□□ -1.55
TGFBR3-210ENST00000533089 CUL9Q8IWT3 2517 aa5.39□□□□□ -1.55
TGFBR3-210ENST00000533089 ANAPC1Q9H1A4 1944 aa5.39□□□□□ -1.55
TGFBR3-210ENST00000533089 IGHV4-59P01825 116 aa5.39□□□□□ -1.55
TGFBR3-210ENST00000533089 P0DMU3 169 aa5.39□□□□□ -1.55
TGFBR3-210ENST00000533089 FAM231AP0DMU4 169 aa5.39□□□□□ -1.55
TGFBR3-210ENST00000533089 FAM231CP0DMU5 169 aa5.39□□□□□ -1.55
TGFBR3-210ENST00000533089 RPS28P62857 69 aaKnown RBP5.39□□□□□ -1.55
TGFBR3-210ENST00000533089 DEFB113Q30KQ7 82 aa5.39□□□□□ -1.55
TGFBR3-210ENST00000533089 C9orf85Q96MD7 179 aa5.39□□□□□ -1.55
TGFBR3-210ENST00000533089 CEP250Q9BV73 2442 aa5.39□□□□□ -1.55
TGFBR3-210ENST00000533089 A0A096LNI7 61 aa5.39□□□□□ -1.55
TGFBR3-210ENST00000533089 TRBV6-6A0A0A6YYG2 114 aa5.39□□□□□ -1.55
TGFBR3-210ENST00000533089 IGKV1-6A0A0C4DH72 117 aa5.39□□□□□ -1.55
TGFBR3-210ENST00000533089 A0A1W2PNU3 283 aaPredicted RBP5.39□□□□□ -1.55
TGFBR3-210ENST00000533089 C10orf142B7Z368 130 aa5.39□□□□□ -1.55
TGFBR3-210ENST00000533089 PDE6HQ13956 83 aa5.39□□□□□ -1.55
TGFBR3-210ENST00000533089 Q8N976 141 aa5.39□□□□□ -1.55
TGFBR3-210ENST00000533089 ARFGEF3Q5TH69 2177 aa5.39□□□□□ -1.55
TGFBR3-210ENST00000533089 IGLV10-54A0A075B6I4 117 aa5.39□□□□□ -1.55
TGFBR3-210ENST00000533089 Q6ZS49 121 aa5.38□□□□□ -1.55
TGFBR3-210ENST00000533089 PRR25Q96S07 402 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms