RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 APOBP04114 4563 aaKnown RBP4.3□□□□□ -1.72
CSDE1-213ENST00000530784 A0A087WTM6 91 aa4.3□□□□□ -1.72
CSDE1-213ENST00000530784 FAM24AA6NFZ4 105 aa4.3□□□□□ -1.72
CSDE1-213ENST00000530784 NMBP08949 121 aa4.3□□□□□ -1.72
CSDE1-213ENST00000530784 PYYP10082 97 aa4.3□□□□□ -1.72
CSDE1-213ENST00000530784 HIST1H1EP10412 219 aaKnown RBP4.3□□□□□ -1.72
CSDE1-213ENST00000530784 CRISP2P16562 243 aa4.3□□□□□ -1.72
CSDE1-213ENST00000530784 RNASE4P34096 147 aaKnown RBP4.3□□□□□ -1.72
CSDE1-213ENST00000530784 SULT1A1P50225 295 aa4.3□□□□□ -1.72
CSDE1-213ENST00000530784 HBG1P69891 147 aa4.3□□□□□ -1.72
CSDE1-213ENST00000530784 HBG2P69892 147 aa4.3□□□□□ -1.72
CSDE1-213ENST00000530784 SLAQ13239 276 aa4.3□□□□□ -1.72
CSDE1-213ENST00000530784 MRPL23Q16540 153 aaKnown RBP4.3□□□□□ -1.72
CSDE1-213ENST00000530784 LINC01620Q4KN68 170 aa4.3□□□□□ -1.72
CSDE1-213ENST00000530784 TMEM78Q5T7P6 136 aa4.3□□□□□ -1.72
CSDE1-213ENST00000530784 STX12Q86Y82 276 aa4.3□□□□□ -1.72
CSDE1-213ENST00000530784 EXOC3-AS1Q8N2X6 119 aa4.3□□□□□ -1.72
CSDE1-213ENST00000530784 C15orf54Q8N8G6 183 aa4.3□□□□□ -1.72
CSDE1-213ENST00000530784 BLNKQ8WV28 456 aa4.3□□□□□ -1.72
CSDE1-213ENST00000530784 CCDC32Q9BV29 185 aa4.3□□□□□ -1.72
CSDE1-213ENST00000530784 AGPAT4-IT1Q9H0P7 198 aa4.3□□□□□ -1.72
CSDE1-213ENST00000530784 LY96Q9Y6Y9 160 aa4.3□□□□□ -1.72
CSDE1-213ENST00000530784 IGHV1OR15-1A0A075B7D0 117 aa4.29□□□□□ -1.72
CSDE1-213ENST00000530784 IGKV2-40A0A087WW87 121 aaPredicted RBP4.29□□□□□ -1.72
CSDE1-213ENST00000530784 TRGV4A0A0C4DH28 118 aa4.29□□□□□ -1.72
CSDE1-213ENST00000530784 K7EP13 123 aa4.29□□□□□ -1.72
CSDE1-213ENST00000530784 IGKV2D-40P01614 121 aaPredicted RBP4.29□□□□□ -1.72
CSDE1-213ENST00000530784 IL7P13232 177 aa4.29□□□□□ -1.72
CSDE1-213ENST00000530784 FGF7P21781 194 aa4.29□□□□□ -1.72
CSDE1-213ENST00000530784 SRIP30626 198 aa4.29□□□□□ -1.72
CSDE1-213ENST00000530784 S100A11P31949 105 aa4.29□□□□□ -1.72
CSDE1-213ENST00000530784 CRYBA4P53673 196 aa4.29□□□□□ -1.72
CSDE1-213ENST00000530784 S100A10P60903 97 aa4.29□□□□□ -1.72
CSDE1-213ENST00000530784 PRR9Q5T870 116 aa4.29□□□□□ -1.72
CSDE1-213ENST00000530784 LYPD5Q6UWN5 251 aa4.29□□□□□ -1.72
CSDE1-213ENST00000530784 NEGR1Q7Z3B1 354 aa4.29□□□□□ -1.72
CSDE1-213ENST00000530784 TMEM252Q8N6L7 170 aa4.29□□□□□ -1.72
CSDE1-213ENST00000530784 ZFAND2AQ8N6M9 145 aa4.29□□□□□ -1.72
CSDE1-213ENST00000530784 FAM104AQ969W3 186 aa4.29□□□□□ -1.72
CSDE1-213ENST00000530784 C11orf1Q9H5F2 150 aa4.29□□□□□ -1.72
CSDE1-213ENST00000530784 LYRM2Q9NU23 88 aaPredicted RBP4.29□□□□□ -1.72
CSDE1-213ENST00000530784 HHLA3Q9XRX5 114 aa4.29□□□□□ -1.72
CSDE1-213ENST00000530784 LOC100131303A0A0U1RQF7 123 aa4.28□□□□□ -1.72
CSDE1-213ENST00000530784 IGSF23A1L1A6 192 aa4.28□□□□□ -1.72
CSDE1-213ENST00000530784 UPK1BO75841 260 aa4.28□□□□□ -1.72
CSDE1-213ENST00000530784 ORM1P02763 201 aa4.28□□□□□ -1.72
CSDE1-213ENST00000530784 EVI2AP22794 236 aa4.28□□□□□ -1.72
CSDE1-213ENST00000530784 ZNF138P52744 262 aa4.28□□□□□ -1.72
CSDE1-213ENST00000530784 KRTAP10-1P60331 282 aa4.28□□□□□ -1.72
CSDE1-213ENST00000530784 ATP6V1FQ16864 119 aa4.28□□□□□ -1.72
CSDE1-213ENST00000530784 GCSAMLQ5JQS6 135 aa4.28□□□□□ -1.72
CSDE1-213ENST00000530784 ERASQ7Z444 233 aa4.28□□□□□ -1.72
CSDE1-213ENST00000530784 WFDC10BQ8IUB3 73 aa4.28□□□□□ -1.72
CSDE1-213ENST00000530784 Q8TAT8 98 aa4.28□□□□□ -1.72
CSDE1-213ENST00000530784 C2orf50Q96LR7 162 aa4.28□□□□□ -1.72
CSDE1-213ENST00000530784 SLC25A2Q9BXI2 301 aa4.28□□□□□ -1.72
CSDE1-213ENST00000530784 NPCDR1Q9BY65 106 aa4.28□□□□□ -1.72
CSDE1-213ENST00000530784 NUDT15Q9NV35 164 aa4.28□□□□□ -1.72
CSDE1-213ENST00000530784 ZNF492Q9P255 531 aa4.28□□□□□ -1.72
CSDE1-213ENST00000530784 TRAV6A0A075B6T7 132 aa4.27□□□□□ -1.73
CSDE1-213ENST00000530784 C9JCJ5 164 aa4.27□□□□□ -1.73
CSDE1-213ENST00000530784 LYRM1O43325 122 aa4.27□□□□□ -1.73
CSDE1-213ENST00000530784 TCRBP04435 133 aa4.27□□□□□ -1.73
CSDE1-213ENST00000530784 SFTA3P0C7M3 94 aa4.27□□□□□ -1.73
CSDE1-213ENST00000530784 CSN1S1P47710 185 aa4.27□□□□□ -1.73
CSDE1-213ENST00000530784 IFITM3Q01628 133 aa4.27□□□□□ -1.73
CSDE1-213ENST00000530784 LAGE3Q14657 143 aa4.27□□□□□ -1.73
CSDE1-213ENST00000530784 Q6ZQT7 251 aa4.27□□□□□ -1.73
CSDE1-213ENST00000530784 MIR17HGQ75NE6 70 aa4.27□□□□□ -1.73
CSDE1-213ENST00000530784 C10orf126Q8N4M7 172 aa4.27□□□□□ -1.73
CSDE1-213ENST00000530784 TXNDC17Q9BRA2 123 aa4.27□□□□□ -1.73
CSDE1-213ENST00000530784 SEC22CQ9BRL7 303 aa4.27□□□□□ -1.73
CSDE1-213ENST00000530784 MRPL32Q9BYC8 188 aaKnown RBP4.27□□□□□ -1.73
CSDE1-213ENST00000530784 LCE3DQ9BYE3 92 aa4.27□□□□□ -1.73
CSDE1-213ENST00000530784 OR51M1Q9H341 326 aa4.27□□□□□ -1.73
CSDE1-213ENST00000530784 KCNIP2Q9NS61 270 aa4.27□□□□□ -1.73
CSDE1-213ENST00000530784 HERC1Q15751 4861 aa4.27□□□□□ -1.73
CSDE1-213ENST00000530784 DNAH5Q8TE73 4624 aa4.26□□□□□ -1.73
CSDE1-213ENST00000530784 RBAKDNA6NC62 111 aa4.26□□□□□ -1.73
CSDE1-213ENST00000530784 PLA2G10O15496 165 aa4.26□□□□□ -1.73
CSDE1-213ENST00000530784 PSCAO43653 123 aa4.26□□□□□ -1.73
CSDE1-213ENST00000530784 SMR3BP02814 79 aaPredicted RBP4.26□□□□□ -1.73
CSDE1-213ENST00000530784 CRYGDP07320 174 aa4.26□□□□□ -1.73
CSDE1-213ENST00000530784 OR10J4P0C629 311 aa4.26□□□□□ -1.73
CSDE1-213ENST00000530784 NBEAP1P0C6P0 100 aa4.26□□□□□ -1.73
CSDE1-213ENST00000530784 ZNF266Q14584 549 aa4.26□□□□□ -1.73
CSDE1-213ENST00000530784 IQCF2Q8IXL9 164 aa4.26□□□□□ -1.73
CSDE1-213ENST00000530784 OR10G4Q8NGN3 311 aa4.26□□□□□ -1.73
CSDE1-213ENST00000530784 OR5C1Q8NGR4 320 aa4.26□□□□□ -1.73
CSDE1-213ENST00000530784 FXYD5Q96DB9 178 aa4.26□□□□□ -1.73
CSDE1-213ENST00000530784 FAM167A-AS1Q96KT0 104 aa4.26□□□□□ -1.73
CSDE1-213ENST00000530784 SLC25A31Q9H0C2 315 aa4.26□□□□□ -1.73
CSDE1-213ENST00000530784 TRAV4A0A0B4J268 109 aa4.25□□□□□ -1.73
CSDE1-213ENST00000530784 C17orf112F2Z3M2 114 aa4.25□□□□□ -1.73
CSDE1-213ENST00000530784 OR7C2O60412 319 aa4.25□□□□□ -1.73
CSDE1-213ENST00000530784 PTTG1O95997 202 aa4.25□□□□□ -1.73
CSDE1-213ENST00000530784 PPT1P50897 306 aa4.25□□□□□ -1.73
CSDE1-213ENST00000530784 RANP62826 216 aaKnown RBP4.25□□□□□ -1.73
CSDE1-213ENST00000530784 UBE2L3P68036 154 aaKnown RBP4.25□□□□□ -1.73
CSDE1-213ENST00000530784 HAMPP81172 84 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms