RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 HIGD1BQ9P298 99 aa6.49□□□□□ -1.37
CTNND1-227ENST00000530748 CHKB-CPT1BH3BT56 60 aa6.48□□□□□ -1.37
CTNND1-227ENST00000530748 SMAD5-AS1Q9Y6J3 95 aa6.48□□□□□ -1.37
CTNND1-227ENST00000530748 TRBV12-3P01733 135 aa6.48□□□□□ -1.37
CTNND1-227ENST00000530748 C11orf1Q9H5F2 150 aa6.48□□□□□ -1.37
CTNND1-227ENST00000530748 OPRPNQ99935 248 aaPredicted RBP6.48□□□□□ -1.37
CTNND1-227ENST00000530748 C2orf16Q68DN1 1984 aa6.48□□□□□ -1.37
CTNND1-227ENST00000530748 A0A0J9YX75 114 aa6.48□□□□□ -1.37
CTNND1-227ENST00000530748 E9PLD3 99 aa6.48□□□□□ -1.37
CTNND1-227ENST00000530748 TNFRSF13BO14836 293 aaPredicted RBP6.48□□□□□ -1.37
CTNND1-227ENST00000530748 DEFB135Q30KP9 77 aa6.48□□□□□ -1.37
CTNND1-227ENST00000530748 ESM1Q9NQ30 184 aa6.48□□□□□ -1.37
CTNND1-227ENST00000530748 FER1L5A0AVI2 2057 aa6.48□□□□□ -1.37
CTNND1-227ENST00000530748 NUPR1O60356 82 aa6.48□□□□□ -1.37
CTNND1-227ENST00000530748 VSIG2Q96IQ7 327 aa6.48□□□□□ -1.37
CTNND1-227ENST00000530748 ODF3Q96PU9 254 aa6.48□□□□□ -1.37
CTNND1-227ENST00000530748 CCL25O15444 150 aa6.47□□□□□ -1.37
CTNND1-227ENST00000530748 A4D1N5 150 aa6.47□□□□□ -1.37
CTNND1-227ENST00000530748 CDPF1Q6NVV7 123 aa6.47□□□□□ -1.37
CTNND1-227ENST00000530748 INTS1Q8N201 2190 aaKnown RBP6.47□□□□□ -1.37
CTNND1-227ENST00000530748 TMEM258P61165 79 aa6.47□□□□□ -1.37
CTNND1-227ENST00000530748 UNQ9165/PRO28630Q6UXU0 137 aa6.47□□□□□ -1.37
CTNND1-227ENST00000530748 CCDC140Q96MF4 163 aa6.47□□□□□ -1.37
CTNND1-227ENST00000530748 ANKRD39Q53RE8 183 aa6.47□□□□□ -1.37
CTNND1-227ENST00000530748 Q6YL49 198 aa6.47□□□□□ -1.37
CTNND1-227ENST00000530748 SEC16AO15027 2179 aa6.46□□□□□ -1.37
CTNND1-227ENST00000530748 C19orf71A6NCJ1 209 aa6.46□□□□□ -1.37
CTNND1-227ENST00000530748 LGALS9O00182 355 aa6.46□□□□□ -1.37
CTNND1-227ENST00000530748 NDUFB1O75438 58 aa6.46□□□□□ -1.37
CTNND1-227ENST00000530748 DENND4AQ7Z401 1863 aa6.46□□□□□ -1.37
CTNND1-227ENST00000530748 MSMPQ1L6U9 139 aa6.46□□□□□ -1.37
CTNND1-227ENST00000530748 NFE4Q86UQ8 179 aa6.46□□□□□ -1.37
CTNND1-227ENST00000530748 TMEM61Q8N0U2 210 aa6.46□□□□□ -1.37
CTNND1-227ENST00000530748 MDFICQ9P1T7 246 aa6.46□□□□□ -1.37
CTNND1-227ENST00000530748 IGHV1-58A0A0C4DH39 117 aa6.46□□□□□ -1.38
CTNND1-227ENST00000530748 IGHV4-31P0DP07 118 aa6.46□□□□□ -1.38
CTNND1-227ENST00000530748 LINC00574Q9H8X3 128 aa6.46□□□□□ -1.38
CTNND1-227ENST00000530748 C14orf177Q52M58 125 aa6.46□□□□□ -1.38
CTNND1-227ENST00000530748 DIRC1Q969H9 104 aa6.46□□□□□ -1.38
CTNND1-227ENST00000530748 IGKV1D-37A0A075B6S9 117 aa6.46□□□□□ -1.38
CTNND1-227ENST00000530748 IGHV4-28A0A0C4DH34 117 aa6.46□□□□□ -1.38
CTNND1-227ENST00000530748 DEFB4AO15263 64 aa6.45□□□□□ -1.38
CTNND1-227ENST00000530748 SPAG11BQ08648 103 aa6.45□□□□□ -1.38
CTNND1-227ENST00000530748 DAND5Q8N907 189 aa6.45□□□□□ -1.38
CTNND1-227ENST00000530748 RS1O15537 224 aa6.45□□□□□ -1.38
CTNND1-227ENST00000530748 P0C879 139 aa6.44□□□□□ -1.38
CTNND1-227ENST00000530748 RP1P56715 2156 aa6.44□□□□□ -1.38
CTNND1-227ENST00000530748 PHF3Q92576 2039 aaKnown RBP6.44□□□□□ -1.38
CTNND1-227ENST00000530748 LINC01620Q4KN68 170 aa6.44□□□□□ -1.38
CTNND1-227ENST00000530748 SVILO95425 2214 aa6.44□□□□□ -1.38
CTNND1-227ENST00000530748 CABIN1Q9Y6J0 2220 aa6.44□□□□□ -1.38
CTNND1-227ENST00000530748 NUP210LQ5VU65 1888 aa6.44□□□□□ -1.38
CTNND1-227ENST00000530748 JMJD7-PLA2G4BH0Y9G9 81 aa6.44□□□□□ -1.38
CTNND1-227ENST00000530748 PRO0255Q9UI72 69 aa6.44□□□□□ -1.38
CTNND1-227ENST00000530748 H7C423 109 aa6.44□□□□□ -1.38
CTNND1-227ENST00000530748 FSTL3O95633 263 aa6.44□□□□□ -1.38
CTNND1-227ENST00000530748 DEFB1P60022 68 aa6.44□□□□□ -1.38
CTNND1-227ENST00000530748 NREPQ16612 68 aa6.44□□□□□ -1.38
CTNND1-227ENST00000530748 DIDO1Q9BTC0 2240 aaKnown RBP6.44□□□□□ -1.38
CTNND1-227ENST00000530748 TRBV10-1A0A0K0K1A3 114 aa6.44□□□□□ -1.38
CTNND1-227ENST00000530748 B9D2Q9BPU9 175 aa6.44□□□□□ -1.38
CTNND1-227ENST00000530748 C19orf84I3L1E1 186 aa6.43□□□□□ -1.38
CTNND1-227ENST00000530748 ODF1Q14990 250 aa6.43□□□□□ -1.38
CTNND1-227ENST00000530748 TP53TG3Q9ULZ0 132 aa6.43□□□□□ -1.38
CTNND1-227ENST00000530748 TRBV10-2A0A0K0K1G8 114 aa6.43□□□□□ -1.38
CTNND1-227ENST00000530748 KIR2DL5BQ8NHK3 375 aa6.43□□□□□ -1.38
CTNND1-227ENST00000530748 FXYD2P54710 66 aa6.43□□□□□ -1.38
CTNND1-227ENST00000530748 KLK12Q9UKR0 248 aa6.43□□□□□ -1.38
CTNND1-227ENST00000530748 RBM3P98179 157 aaKnown RBP6.43□□□□□ -1.38
CTNND1-227ENST00000530748 C20orf203Q8NBC4 194 aa6.43□□□□□ -1.38
CTNND1-227ENST00000530748 CACNA1BQ00975 2339 aa6.43□□□□□ -1.38
CTNND1-227ENST00000530748 IGF1P05019 195 aa6.43□□□□□ -1.38
CTNND1-227ENST00000530748 PSMB8P28062 276 aa6.43□□□□□ -1.38
CTNND1-227ENST00000530748 LMO4P61968 165 aa6.43□□□□□ -1.38
CTNND1-227ENST00000530748 TMEM256-PLSCR3K7ERE1 68 aa6.42□□□□□ -1.38
CTNND1-227ENST00000530748 WISP2O76076 250 aa6.42□□□□□ -1.38
CTNND1-227ENST00000530748 MP68P56378 58 aa6.42□□□□□ -1.38
CTNND1-227ENST00000530748 C11orf45Q8TAV5 145 aa6.42□□□□□ -1.38
CTNND1-227ENST00000530748 CLEC2BQ92478 149 aa6.42□□□□□ -1.38
CTNND1-227ENST00000530748 CACNA1IQ9P0X4 2223 aa6.42□□□□□ -1.38
CTNND1-227ENST00000530748 LYRM9A8MSI8 78 aa6.42□□□□□ -1.38
CTNND1-227ENST00000530748 SEC61GP60059 68 aa6.42□□□□□ -1.38
CTNND1-227ENST00000530748 Q6ZUT4 128 aa6.42□□□□□ -1.38
CTNND1-227ENST00000530748 MIR7-3HGQ8N6C7 128 aa6.42□□□□□ -1.38
CTNND1-227ENST00000530748 ADAMTS9Q9P2N4 1935 aa6.42□□□□□ -1.38
CTNND1-227ENST00000530748 ATOX1O00244 68 aa6.42□□□□□ -1.38
CTNND1-227ENST00000530748 COX7BP24311 80 aa6.42□□□□□ -1.38
CTNND1-227ENST00000530748 MIAQ16674 131 aa6.42□□□□□ -1.38
CTNND1-227ENST00000530748 ZFAND2AQ8N6M9 145 aa6.42□□□□□ -1.38
CTNND1-227ENST00000530748 CRYGBP07316 175 aa6.42□□□□□ -1.38
CTNND1-227ENST00000530748 EIF4EBP1Q13541 118 aaPredicted RBP6.42□□□□□ -1.38
CTNND1-227ENST00000530748 AHCTF1Q8WYP5 2266 aa6.42□□□□□ -1.38
CTNND1-227ENST00000530748 TNRC6BQ9UPQ9 1833 aaKnown RBP6.41□□□□□ -1.38
CTNND1-227ENST00000530748 SMIM9A6NGZ8 99 aa6.41□□□□□ -1.38
CTNND1-227ENST00000530748 IGKV3D-7A0A0C4DH55 119 aa6.41□□□□□ -1.38
CTNND1-227ENST00000530748 LECT2O14960 151 aa6.41□□□□□ -1.38
CTNND1-227ENST00000530748 C20orf173Q96LM9 149 aa6.41□□□□□ -1.38
CTNND1-227ENST00000530748 A0A1B0GXF2 115 aa6.41□□□□□ -1.38
CTNND1-227ENST00000530748 PROP1O75360 226 aa6.41□□□□□ -1.38
CTNND1-227ENST00000530748 TEN1Q86WV5 123 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 184.1 ms