RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 ICOSQ9Y6W8 199 aa11.93□□□□□ -0.5
PCDHA4-203ENST00000530339 H3BQ85 93 aa11.92□□□□□ -0.5
PCDHA4-203ENST00000530339 PROP1O75360 226 aa11.92□□□□□ -0.5
PCDHA4-203ENST00000530339 ATP6V0E2Q8NHE4 81 aa11.92□□□□□ -0.5
PCDHA4-203ENST00000530339 DAZ2Q13117 558 aaKnown RBP11.92□□□□□ -0.5
PCDHA4-203ENST00000530339 DAZ4Q86SG3 579 aaKnown RBP11.92□□□□□ -0.5
PCDHA4-203ENST00000530339 DAZ3Q9NR90 486 aaKnown RBP11.92□□□□□ -0.5
PCDHA4-203ENST00000530339 U3KQE9 123 aa11.92□□□□□ -0.5
PCDHA4-203ENST00000530339 IGKV1D-37A0A075B6S9 117 aa11.92□□□□□ -0.5
PCDHA4-203ENST00000530339 TRAV25A0A0B4J276 109 aa11.92□□□□□ -0.5
PCDHA4-203ENST00000530339 PLA2G5P39877 138 aa11.92□□□□□ -0.5
PCDHA4-203ENST00000530339 DSCR8Q96T75 97 aa11.92□□□□□ -0.5
PCDHA4-203ENST00000530339 TIMM17AQ99595 171 aa11.92□□□□□ -0.5
PCDHA4-203ENST00000530339 FSTL3O95633 263 aa11.92□□□□□ -0.5
PCDHA4-203ENST00000530339 IGHV4-59P01825 116 aa11.91□□□□□ -0.5
PCDHA4-203ENST00000530339 GDF5OSQ5U4N7 250 aa11.91□□□□□ -0.5
PCDHA4-203ENST00000530339 C10orf105Q8TEF2 133 aa11.91□□□□□ -0.5
PCDHA4-203ENST00000530339 IL17DQ8TAD2 202 aa11.91□□□□□ -0.5
PCDHA4-203ENST00000530339 MRAPQ8TCY5 172 aa11.91□□□□□ -0.5
PCDHA4-203ENST00000530339 GPHB5Q86YW7 130 aa11.9□□□□□ -0.5
PCDHA4-203ENST00000530339 MBD6Q96DN6 1003 aa11.9□□□□□ -0.5
PCDHA4-203ENST00000530339 AJUBAQ96IF1 538 aa11.9□□□□□ -0.5
PCDHA4-203ENST00000530339 LINC00322Q6ZN03 302 aaPredicted RBP11.9□□□□□ -0.5
PCDHA4-203ENST00000530339 MLST8Q9BVC4 326 aa11.9□□□□□ -0.5
PCDHA4-203ENST00000530339 LOXL1Q08397 574 aaPredicted RBP11.89□□□□□ -0.51
PCDHA4-203ENST00000530339 NCKAP5O14513 1909 aa11.89□□□□□ -0.51
PCDHA4-203ENST00000530339 RPL39P62891 51 aaKnown RBP11.89□□□□□ -0.51
PCDHA4-203ENST00000530339 SEM1Q6ZVN7 128 aa11.89□□□□□ -0.51
PCDHA4-203ENST00000530339 SMIM20Q8N5G0 67 aa11.89□□□□□ -0.51
PCDHA4-203ENST00000530339 ORMDL1Q9P0S3 153 aa11.89□□□□□ -0.51
PCDHA4-203ENST00000530339 TP53TG3Q9ULZ0 132 aa11.89□□□□□ -0.51
PCDHA4-203ENST00000530339 IGHV4-61A0A0C4DH41 118 aa11.89□□□□□ -0.51
PCDHA4-203ENST00000530339 C11orf86A6NJI1 115 aa11.88□□□□□ -0.51
PCDHA4-203ENST00000530339 H0YGX0 51 aa11.88□□□□□ -0.51
PCDHA4-203ENST00000530339 RS1O15537 224 aa11.88□□□□□ -0.51
PCDHA4-203ENST00000530339 CCL18P55774 89 aa11.88□□□□□ -0.51
PCDHA4-203ENST00000530339 PIFOQ8TCI5 191 aa11.88□□□□□ -0.51
PCDHA4-203ENST00000530339 K7EQD1 137 aa11.88□□□□□ -0.51
PCDHA4-203ENST00000530339 GRNP28799 593 aaKnown RBP11.88□□□□□ -0.51
PCDHA4-203ENST00000530339 ANGP03950 147 aaKnown RBP11.87□□□□□ -0.51
PCDHA4-203ENST00000530339 KIF26AQ9ULI4 1882 aaPredicted RBP11.87□□□□□ -0.51
PCDHA4-203ENST00000530339 TRBV10-2A0A0K0K1G8 114 aa11.87□□□□□ -0.51
PCDHA4-203ENST00000530339 H3BT86 120 aa11.87□□□□□ -0.51
PCDHA4-203ENST00000530339 IGHG2P01859 326 aa11.87□□□□□ -0.51
PCDHA4-203ENST00000530339 PRB1P04280 392 aa11.87□□□□□ -0.51
PCDHA4-203ENST00000530339 KLK5Q9Y337 293 aaPredicted RBP11.87□□□□□ -0.51
PCDHA4-203ENST00000530339 NOP10Q9NPE3 64 aaKnown RBP11.86□□□□□ -0.51
PCDHA4-203ENST00000530339 A0A0B4J2C4 111 aa11.86□□□□□ -0.51
PCDHA4-203ENST00000530339 TNCP24821 2201 aa11.86□□□□□ -0.51
PCDHA4-203ENST00000530339 MSMPQ1L6U9 139 aa11.86□□□□□ -0.51
PCDHA4-203ENST00000530339 ADORA2A-AS1P86434 159 aa11.86□□□□□ -0.51
PCDHA4-203ENST00000530339 EIF4EBP1Q13541 118 aaPredicted RBP11.86□□□□□ -0.51
PCDHA4-203ENST00000530339 SPART-AS1P0CW21 52 aa11.85□□□□□ -0.51
PCDHA4-203ENST00000530339 Q8N7P7 452 aa11.85□□□□□ -0.51
PCDHA4-203ENST00000530339 SIRPDQ9H106 197 aa11.85□□□□□ -0.51
PCDHA4-203ENST00000530339 FAM236AA0A1B0GUQ0 79 aa11.85□□□□□ -0.51
PCDHA4-203ENST00000530339 FAM236BA0A1B0GV22 79 aa11.85□□□□□ -0.51
PCDHA4-203ENST00000530339 ATOX1O00244 68 aa11.85□□□□□ -0.51
PCDHA4-203ENST00000530339 TRAV26-1A0A087WT03 109 aa11.84□□□□□ -0.51
PCDHA4-203ENST00000530339 IGHV4-30-2A0A087WSY4 118 aa11.84□□□□□ -0.51
PCDHA4-203ENST00000530339 IGHV4-38-2P0DP08 117 aa11.84□□□□□ -0.51
PCDHA4-203ENST00000530339 COL4A4P53420 1690 aaPredicted RBP11.84□□□□□ -0.51
PCDHA4-203ENST00000530339 SND1-IT1Q9HBX3 110 aa11.84□□□□□ -0.51
PCDHA4-203ENST00000530339 UBE2BP63146 152 aa11.84□□□□□ -0.51
PCDHA4-203ENST00000530339 NDUFA11Q86Y39 141 aa11.84□□□□□ -0.51
PCDHA4-203ENST00000530339 FANCD2OSQ96PS1 177 aa11.84□□□□□ -0.51
PCDHA4-203ENST00000530339 TMEM131Q92545 1883 aa11.83□□□□□ -0.52
PCDHA4-203ENST00000530339 PTH2Q96A98 100 aa11.83□□□□□ -0.52
PCDHA4-203ENST00000530339 MYCNOSP40205 109 aa11.83□□□□□ -0.52
PCDHA4-203ENST00000530339 C1orf43Q9BWL3 253 aa11.83□□□□□ -0.52
PCDHA4-203ENST00000530339 IGKV2D-24A0A075B6R9 120 aa11.83□□□□□ -0.52
PCDHA4-203ENST00000530339 MRPL23Q16540 153 aaKnown RBP11.82□□□□□ -0.52
PCDHA4-203ENST00000530339 Q8N1Y9 231 aa11.82□□□□□ -0.52
PCDHA4-203ENST00000530339 NACAE9PAV3 2078 aa11.82□□□□□ -0.52
PCDHA4-203ENST00000530339 ATP5G1P05496 136 aa11.82□□□□□ -0.52
PCDHA4-203ENST00000530339 XCL1P47992 114 aa11.82□□□□□ -0.52
PCDHA4-203ENST00000530339 ODF3Q96PU9 254 aa11.82□□□□□ -0.52
PCDHA4-203ENST00000530339 TM2D2Q9BX73 214 aa11.82□□□□□ -0.52
PCDHA4-203ENST00000530339 KIAA1549LQ6ZVL6 1849 aa11.82□□□□□ -0.52
PCDHA4-203ENST00000530339 A0A1W2PNU3 283 aaPredicted RBP11.81□□□□□ -0.52
PCDHA4-203ENST00000530339 IGLC6P0CF74 106 aa11.81□□□□□ -0.52
PCDHA4-203ENST00000530339 ZNF80P51504 273 aaPredicted RBP11.81□□□□□ -0.52
PCDHA4-203ENST00000530339 RBX1P62877 108 aa11.81□□□□□ -0.52
PCDHA4-203ENST00000530339 TP73-AS1Q9UF72 201 aa11.81□□□□□ -0.52
PCDHA4-203ENST00000530339 MUC6Q6W4X9 2439 aa11.81□□□□□ -0.52
PCDHA4-203ENST00000530339 ANKHD1Q8IWZ3 2542 aaKnown RBP11.81□□□□□ -0.52
PCDHA4-203ENST00000530339 LGALS9O00182 355 aa11.81□□□□□ -0.52
PCDHA4-203ENST00000530339 CXCL5P42830 114 aa11.81□□□□□ -0.52
PCDHA4-203ENST00000530339 RBM3P98179 157 aaKnown RBP11.81□□□□□ -0.52
PCDHA4-203ENST00000530339 C2orf16Q68DN1 1984 aa11.81□□□□□ -0.52
PCDHA4-203ENST00000530339 ODF3BA8MYP8 253 aa11.8□□□□□ -0.52
PCDHA4-203ENST00000530339 C5orf38Q86SI9 138 aa11.8□□□□□ -0.52
PCDHA4-203ENST00000530339 CLPSL1A2RUU4 121 aa11.8□□□□□ -0.52
PCDHA4-203ENST00000530339 TRAV4A0A0B4J268 109 aa11.8□□□□□ -0.52
PCDHA4-203ENST00000530339 INSL3P51460 131 aa11.8□□□□□ -0.52
PCDHA4-203ENST00000530339 SLURP1P55000 103 aa11.8□□□□□ -0.52
PCDHA4-203ENST00000530339 BLCAPP62952 87 aa11.8□□□□□ -0.52
PCDHA4-203ENST00000530339 C4orf3Q8WVX3 66 aa11.8□□□□□ -0.52
PCDHA4-203ENST00000530339 MED12LQ86YW9 2145 aa11.8□□□□□ -0.52
PCDHA4-203ENST00000530339 CLPSL2Q6UWE3 100 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms