RNA–Protein interactions for RNA: ENST00000530267.5

USP35-204, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 2 BASIC

Gene USP35, Length 2,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-204ENST00000530267 CSTL1Q9H114 145 aa11.23□□□□□ -0.61
USP35-204ENST00000530267 FGF6P10767 208 aa11.22□□□□□ -0.61
USP35-204ENST00000530267 LINC00315P59091 139 aa11.22□□□□□ -0.61
USP35-204ENST00000530267 BVES-AS1Q5T3Y7 98 aa11.22□□□□□ -0.61
USP35-204ENST00000530267 FOXI2Q6ZQN5 318 aa11.22□□□□□ -0.61
USP35-204ENST00000530267 DEFB125Q8N687 156 aa11.22□□□□□ -0.61
USP35-204ENST00000530267 TTTY13Q9BZ97 58 aa11.22□□□□□ -0.61
USP35-204ENST00000530267 KIF25-AS1Q9Y6Z4 181 aa11.22□□□□□ -0.61
USP35-204ENST00000530267 IGHV1OR15-1A0A075B7D0 117 aa11.21□□□□□ -0.61
USP35-204ENST00000530267 NXPH4O95158 308 aa11.21□□□□□ -0.61
USP35-204ENST00000530267 SUMO4Q6EEV6 95 aa11.21□□□□□ -0.61
USP35-204ENST00000530267 AMTNQ6UX39 209 aa11.21□□□□□ -0.61
USP35-204ENST00000530267 MRPL35Q9NZE8 188 aaKnown RBP11.21□□□□□ -0.61
USP35-204ENST00000530267 ATP5LO75964 103 aa11.21□□□□□ -0.61
USP35-204ENST00000530267 DUSP14O95147 198 aaKnown RBP11.21□□□□□ -0.61
USP35-204ENST00000530267 IGKCP01834 107 aa11.21□□□□□ -0.61
USP35-204ENST00000530267 GTSCR1Q86UQ5 136 aa11.21□□□□□ -0.61
USP35-204ENST00000530267 DYNLRB2Q8TF09 96 aa11.21□□□□□ -0.61
USP35-204ENST00000530267 ODF3Q96PU9 254 aa11.21□□□□□ -0.61
USP35-204ENST00000530267 C20orf78Q9BR46 151 aa11.21□□□□□ -0.61
USP35-204ENST00000530267 YAE1D1Q9NRH1 226 aa11.21□□□□□ -0.61
USP35-204ENST00000530267 IGKV2D-26A0A0A0MRZ7 120 aa11.2□□□□□ -0.62
USP35-204ENST00000530267 J3QKU1 62 aa11.2□□□□□ -0.62
USP35-204ENST00000530267 RBMY1A1P0DJD3 496 aaKnown RBP11.2□□□□□ -0.62
USP35-204ENST00000530267 RBMY1CP0DJD4 496 aa11.2□□□□□ -0.62
USP35-204ENST00000530267 RBMY1FQ15415 496 aaKnown RBP11.2□□□□□ -0.62
USP35-204ENST00000530267 PEMTQ9UBM1 199 aa11.2□□□□□ -0.62
USP35-204ENST00000530267 HHLA3Q9XRX5 114 aa11.2□□□□□ -0.62
USP35-204ENST00000530267 JMJD1CQ15652 2540 aa11.2□□□□□ -0.62
USP35-204ENST00000530267 CBY3A6NI87 242 aa11.2□□□□□ -0.62
USP35-204ENST00000530267 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.2□□□□□ -0.62
USP35-204ENST00000530267 SCGB3A1Q96QR1 104 aa11.2□□□□□ -0.62
USP35-204ENST00000530267 ORMDL2Q53FV1 153 aa11.19□□□□□ -0.62
USP35-204ENST00000530267 DPM2O94777 84 aa11.19□□□□□ -0.62
USP35-204ENST00000530267 ZNF56Q15929 161 aa11.19□□□□□ -0.62
USP35-204ENST00000530267 ZC2HC1BQ5TFG8 222 aa11.19□□□□□ -0.62
USP35-204ENST00000530267 C9orf85Q96MD7 179 aa11.19□□□□□ -0.62
USP35-204ENST00000530267 ZMAT4Q9H898 229 aa11.19□□□□□ -0.62
USP35-204ENST00000530267 CD300EQ496F6 205 aaPredicted RBP11.18□□□□□ -0.62
USP35-204ENST00000530267 C2orf66Q6UXQ4 117 aa11.18□□□□□ -0.62
USP35-204ENST00000530267 C12orf54Q6X4T0 127 aa11.18□□□□□ -0.62
USP35-204ENST00000530267 BOD1L2Q8IYS8 172 aa11.18□□□□□ -0.62
USP35-204ENST00000530267 RBMY1BA6NDE4 496 aaKnown RBP11.18□□□□□ -0.62
USP35-204ENST00000530267 RBMY1EA6NEQ0 496 aaKnown RBP11.18□□□□□ -0.62
USP35-204ENST00000530267 RBMY1DP0C7P1 496 aaKnown RBP11.18□□□□□ -0.62
USP35-204ENST00000530267 CD28P10747 220 aa11.18□□□□□ -0.62
USP35-204ENST00000530267 C21orf62-AS1Q17RA5 79 aa11.18□□□□□ -0.62
USP35-204ENST00000530267 ZNF876PQ49A33 203 aa11.18□□□□□ -0.62
USP35-204ENST00000530267 H3BMM0 161 aa11.17□□□□□ -0.62
USP35-204ENST00000530267 TMEM86BQ8N661 226 aa11.17□□□□□ -0.62
USP35-204ENST00000530267 TOMM6Q96B49 74 aa11.17□□□□□ -0.62
USP35-204ENST00000530267 RAX2Q96IS3 184 aa11.17□□□□□ -0.62
USP35-204ENST00000530267 COX11Q9Y6N1 276 aa11.17□□□□□ -0.62
USP35-204ENST00000530267 SETXQ7Z333 2677 aaKnown RBP11.17□□□□□ -0.62
USP35-204ENST00000530267 KRTAP1-1Q07627 177 aa11.17□□□□□ -0.62
USP35-204ENST00000530267 ANK3Q12955 4377 aaKnown RBP11.17□□□□□ -0.62
USP35-204ENST00000530267 A0A087WX48 190 aa11.16□□□□□ -0.62
USP35-204ENST00000530267 HLA-DRB4P13762 266 aa11.16□□□□□ -0.62
USP35-204ENST00000530267 SYT8Q8NBV8 401 aa11.16□□□□□ -0.62
USP35-204ENST00000530267 ZNF256Q9Y2P7 627 aaPredicted RBP11.16□□□□□ -0.62
USP35-204ENST00000530267 HLA-DRB4X5D2U9 266 aa11.16□□□□□ -0.62
USP35-204ENST00000530267 IGHV3-73A0A0B4J1V6 119 aa11.16□□□□□ -0.62
USP35-204ENST00000530267 PCP4P48539 62 aa11.16□□□□□ -0.62
USP35-204ENST00000530267 DEFB114Q30KQ6 69 aa11.16□□□□□ -0.62
USP35-204ENST00000530267 POM121L12Q8N7R1 296 aa11.16□□□□□ -0.62
USP35-204ENST00000530267 MAP6D1Q9H9H5 199 aa11.16□□□□□ -0.62
USP35-204ENST00000530267 PPP1R17O96001 155 aa11.15□□□□□ -0.62
USP35-204ENST00000530267 SDHAF1A6NFY7 115 aa11.15□□□□□ -0.63
USP35-204ENST00000530267 CRYGDP07320 174 aa11.15□□□□□ -0.63
USP35-204ENST00000530267 RPL39P62891 51 aaKnown RBP11.15□□□□□ -0.63
USP35-204ENST00000530267 TMEM97Q5BJF2 176 aa11.15□□□□□ -0.63
USP35-204ENST00000530267 CITED2Q99967 270 aaPredicted RBP11.15□□□□□ -0.63
USP35-204ENST00000530267 TRAV8-6A0A0B4J262 113 aa11.14□□□□□ -0.63
USP35-204ENST00000530267 TAX1BP3O14907 124 aa11.14□□□□□ -0.63
USP35-204ENST00000530267 TEX29Q8N6K0 151 aa11.14□□□□□ -0.63
USP35-204ENST00000530267 SMR3AQ99954 134 aa11.14□□□□□ -0.63
USP35-204ENST00000530267 TP53TG1Q9Y2A0 90 aa11.14□□□□□ -0.63
USP35-204ENST00000530267 HIVEP2P31629 2446 aa11.13□□□□□ -0.63
USP35-204ENST00000530267 POLR2KP53803 58 aaKnown RBP11.13□□□□□ -0.63
USP35-204ENST00000530267 MORN3Q6PF18 240 aaPredicted RBP11.13□□□□□ -0.63
USP35-204ENST00000530267 BAALCQ8WXS3 180 aa11.13□□□□□ -0.63
USP35-204ENST00000530267 CHTOPQ9Y3Y2 248 aaKnown RBP11.13□□□□□ -0.63
USP35-204ENST00000530267 TRGV11A0A075B6L2 103 aa11.13□□□□□ -0.63
USP35-204ENST00000530267 H7C1H1 209 aa11.13□□□□□ -0.63
USP35-204ENST00000530267 CCL24O00175 119 aa11.13□□□□□ -0.63
USP35-204ENST00000530267 ZFP2Q6ZN57 461 aa11.13□□□□□ -0.63
USP35-204ENST00000530267 ORAOV1Q8WV07 137 aa11.13□□□□□ -0.63
USP35-204ENST00000530267 KIR2DL4Q99706 377 aa11.13□□□□□ -0.63
USP35-204ENST00000530267 M0QY20 66 aa11.12□□□□□ -0.63
USP35-204ENST00000530267 EMP1P54849 157 aa11.12□□□□□ -0.63
USP35-204ENST00000530267 NEXN-AS1Q8NBZ9 246 aa11.12□□□□□ -0.63
USP35-204ENST00000530267 F8VRH5 84 aa11.11□□□□□ -0.63
USP35-204ENST00000530267 PLNP26678 52 aa11.11□□□□□ -0.63
USP35-204ENST00000530267 PROK1P58294 105 aa11.11□□□□□ -0.63
USP35-204ENST00000530267 K7EMI3 77 aa11.11□□□□□ -0.63
USP35-204ENST00000530267 VCYO14598 125 aa11.11□□□□□ -0.63
USP35-204ENST00000530267 VAMP3Q15836 100 aa11.11□□□□□ -0.63
USP35-204ENST00000530267 LINC01006Q8NI28 216 aa11.11□□□□□ -0.63
USP35-204ENST00000530267 PRSS29PA6NIE9 313 aa11.1□□□□□ -0.63
USP35-204ENST00000530267 P0DMU3 169 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms