RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 UBE2D3P61077 147 aa10.19□□□□□ -0.78
CHMP4A-203ENST00000527154 UBE2D2P62837 147 aa10.19□□□□□ -0.78
CHMP4A-203ENST00000527154 PRR3P79522 188 aaKnown RBP10.19□□□□□ -0.78
CHMP4A-203ENST00000527154 MPV17L2Q567V2 206 aa10.19□□□□□ -0.78
CHMP4A-203ENST00000527154 PPP1R1CQ8WVI7 109 aa10.19□□□□□ -0.78
CHMP4A-203ENST00000527154 SMIM3Q9BZL3 60 aa10.19□□□□□ -0.78
CHMP4A-203ENST00000527154 HSPB11Q9Y547 144 aa10.19□□□□□ -0.78
CHMP4A-203ENST00000527154 IGKV3D-20A0A0C4DH25 116 aa10.18□□□□□ -0.78
CHMP4A-203ENST00000527154 TRBV10-1A0A0K0K1A3 114 aa10.18□□□□□ -0.78
CHMP4A-203ENST00000527154 SERTM2A0A1B0GWG4 89 aa10.18□□□□□ -0.78
CHMP4A-203ENST00000527154 GCGP01275 180 aa10.18□□□□□ -0.78
CHMP4A-203ENST00000527154 HLA-DQA1P01909 254 aa10.18□□□□□ -0.78
CHMP4A-203ENST00000527154 GNG5P63218 68 aa10.18□□□□□ -0.78
CHMP4A-203ENST00000527154 PQLC2Q6ZP29 291 aa10.18□□□□□ -0.78
CHMP4A-203ENST00000527154 A0A1W2PPV4 95 aa10.17□□□□□ -0.78
CHMP4A-203ENST00000527154 CRPP02741 224 aa10.17□□□□□ -0.78
CHMP4A-203ENST00000527154 SLPIP03973 132 aa10.17□□□□□ -0.78
CHMP4A-203ENST00000527154 H2BFSP57053 126 aa10.17□□□□□ -0.78
CHMP4A-203ENST00000527154 KCNIP4Q6PIL6 250 aa10.17□□□□□ -0.78
CHMP4A-203ENST00000527154 C15orf54Q8N8G6 183 aa10.17□□□□□ -0.78
CHMP4A-203ENST00000527154 OR10G8Q8NGN5 311 aa10.17□□□□□ -0.78
CHMP4A-203ENST00000527154 OR2G3Q8NGZ4 309 aa10.17□□□□□ -0.78
CHMP4A-203ENST00000527154 SGK494Q96LW2 274 aa10.17□□□□□ -0.78
CHMP4A-203ENST00000527154 NDFIP1Q9BT67 221 aa10.17□□□□□ -0.78
CHMP4A-203ENST00000527154 IL36BQ9NZH7 164 aa10.17□□□□□ -0.78
CHMP4A-203ENST00000527154 TRBV6-8A0A0A6YYG3 113 aa10.16□□□□□ -0.78
CHMP4A-203ENST00000527154 CHTF8P0CG12 524 aa10.16□□□□□ -0.78
CHMP4A-203ENST00000527154 PET100P0DJ07 73 aa10.16□□□□□ -0.78
CHMP4A-203ENST00000527154 LGALSLQ3ZCW2 172 aaPredicted RBP10.16□□□□□ -0.78
CHMP4A-203ENST00000527154 HMGB3O15347 200 aaKnown RBP10.15□□□□□ -0.78
CHMP4A-203ENST00000527154 SSNA1O43805 119 aa10.15□□□□□ -0.78
CHMP4A-203ENST00000527154 MPC2O95563 127 aa10.15□□□□□ -0.78
CHMP4A-203ENST00000527154 RPL12P30050 165 aaKnown RBP10.15□□□□□ -0.78
CHMP4A-203ENST00000527154 SRSF9Q13242 221 aaKnown RBP eCLIP10.15□□□□□ -0.78
CHMP4A-203ENST00000527154 DNLZQ5SXM8 178 aa10.15□□□□□ -0.78
CHMP4A-203ENST00000527154 LCE2AQ5TA79 106 aaPredicted RBP10.15□□□□□ -0.78
CHMP4A-203ENST00000527154 SPINK6Q6UWN8 80 aa10.15□□□□□ -0.78
CHMP4A-203ENST00000527154 C7orf33Q8WU49 177 aa10.15□□□□□ -0.78
CHMP4A-203ENST00000527154 TRBV7-3A0A075B6L6 115 aa10.14□□□□□ -0.79
CHMP4A-203ENST00000527154 IGHV3-64A0A075B6Q5 118 aa10.14□□□□□ -0.79
CHMP4A-203ENST00000527154 RAB2AP61019 212 aa10.14□□□□□ -0.79
CHMP4A-203ENST00000527154 ANGP03950 147 aaKnown RBP10.13□□□□□ -0.79
CHMP4A-203ENST00000527154 TCRAP04437 139 aa10.13□□□□□ -0.79
CHMP4A-203ENST00000527154 SMUG1Q53HV7 270 aa10.13□□□□□ -0.79
CHMP4A-203ENST00000527154 WFDC1Q9HC57 220 aa10.13□□□□□ -0.79
CHMP4A-203ENST00000527154 PSG8Q9UQ74 426 aa10.13□□□□□ -0.79
CHMP4A-203ENST00000527154 TMEM262E9PQX1 116 aa10.12□□□□□ -0.79
CHMP4A-203ENST00000527154 ARL14EPLP0DKL9 152 aa10.12□□□□□ -0.79
CHMP4A-203ENST00000527154 RPL36AP83881 106 aaKnown RBP10.12□□□□□ -0.79
CHMP4A-203ENST00000527154 REG3GQ6UW15 175 aa10.12□□□□□ -0.79
CHMP4A-203ENST00000527154 RPL36ALQ969Q0 106 aaKnown RBP10.12□□□□□ -0.79
CHMP4A-203ENST00000527154 SFRP2Q96HF1 295 aa10.12□□□□□ -0.79
CHMP4A-203ENST00000527154 K7EQM0 130 aa10.11□□□□□ -0.79
CHMP4A-203ENST00000527154 PKIAP61925 76 aa10.11□□□□□ -0.79
CHMP4A-203ENST00000527154 ZFP69Q49AA0 526 aa10.11□□□□□ -0.79
CHMP4A-203ENST00000527154 C5orf17Q8NAS9 161 aa10.11□□□□□ -0.79
CHMP4A-203ENST00000527154 SUN5Q8TC36 379 aa10.11□□□□□ -0.79
CHMP4A-203ENST00000527154 S100A4P26447 101 aaKnown RBP10.1□□□□□ -0.79
CHMP4A-203ENST00000527154 CDC34P49427 236 aaPredicted RBP10.1□□□□□ -0.79
CHMP4A-203ENST00000527154 RGS21Q2M5E4 152 aa10.1□□□□□ -0.79
CHMP4A-203ENST00000527154 PRNTQ86SH4 94 aa10.1□□□□□ -0.79
CHMP4A-203ENST00000527154 FLI1Q01543 452 aaPredicted RBP10.09□□□□□ -0.79
CHMP4A-203ENST00000527154 PRR27Q6MZM9 219 aa10.09□□□□□ -0.79
CHMP4A-203ENST00000527154 ALG5Q9Y673 324 aa10.09□□□□□ -0.79
CHMP4A-203ENST00000527154 A0A087WWL8 130 aa10.08□□□□□ -0.8
CHMP4A-203ENST00000527154 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.08□□□□□ -0.8
CHMP4A-203ENST00000527154 hDV102S1A0JD36 115 aa10.08□□□□□ -0.8
CHMP4A-203ENST00000527154 STAG3L2P0CL84 134 aa10.08□□□□□ -0.8
CHMP4A-203ENST00000527154 STAG3L3P0CL85 134 aa10.08□□□□□ -0.8
CHMP4A-203ENST00000527154 GCHFRP30047 84 aa10.08□□□□□ -0.8
CHMP4A-203ENST00000527154 SUMO1P63165 101 aaKnown RBP10.08□□□□□ -0.8
CHMP4A-203ENST00000527154 FAM74A4Q5TZK3 123 aa10.08□□□□□ -0.8
CHMP4A-203ENST00000527154 NTM-AS1Q6ZSK4 140 aa10.08□□□□□ -0.8
CHMP4A-203ENST00000527154 H3BVH4 76 aa10.07□□□□□ -0.8
CHMP4A-203ENST00000527154 RBX1P62877 108 aa10.07□□□□□ -0.8
CHMP4A-203ENST00000527154 SAPCD1Q5SSQ6 148 aa10.07□□□□□ -0.8
CHMP4A-203ENST00000527154 LINC00269Q8N2A0 174 aa10.07□□□□□ -0.8
CHMP4A-203ENST00000527154 RAB24Q969Q5 203 aa10.07□□□□□ -0.8
CHMP4A-203ENST00000527154 DPH3Q96FX2 82 aa10.07□□□□□ -0.8
CHMP4A-203ENST00000527154 MED28Q9H204 178 aa10.07□□□□□ -0.8
CHMP4A-203ENST00000527154 VAX2Q9UIW0 290 aa10.07□□□□□ -0.8
CHMP4A-203ENST00000527154 EPDR1Q9UM22 224 aa10.07□□□□□ -0.8
CHMP4A-203ENST00000527154 ARMS2P0C7Q2 107 aa10.06□□□□□ -0.8
CHMP4A-203ENST00000527154 NEXN-AS1Q8NBZ9 246 aa10.06□□□□□ -0.8
CHMP4A-203ENST00000527154 OR11H4Q8NGC9 324 aa10.06□□□□□ -0.8
CHMP4A-203ENST00000527154 FABP5P3A8MUU1 101 aa10.05□□□□□ -0.8
CHMP4A-203ENST00000527154 COX8CQ7Z4L0 72 aa10.05□□□□□ -0.8
CHMP4A-203ENST00000527154 CHCHD5Q9BSY4 110 aa10.05□□□□□ -0.8
CHMP4A-203ENST00000527154 TMEM167BQ9NRX6 74 aa10.05□□□□□ -0.8
CHMP4A-203ENST00000527154 MUC21A0A0G2JKD1 596 aa10.04□□□□□ -0.8
CHMP4A-203ENST00000527154 A0A0U1RQV1 116 aa10.04□□□□□ -0.8
CHMP4A-203ENST00000527154 KRBOX1C9JBD0 128 aa10.04□□□□□ -0.8
CHMP4A-203ENST00000527154 GZMBP10144 247 aa10.04□□□□□ -0.8
CHMP4A-203ENST00000527154 CLPSL2Q6UWE3 100 aa10.04□□□□□ -0.8
CHMP4A-203ENST00000527154 GTSF1Q8WW33 167 aa10.04□□□□□ -0.8
CHMP4A-203ENST00000527154 AP5S1Q9NUS5 200 aa10.04□□□□□ -0.8
CHMP4A-203ENST00000527154 IGLV10-54A0A075B6I4 117 aa10.03□□□□□ -0.8
CHMP4A-203ENST00000527154 TRAV8-4A0A0B4J246 113 aa10.03□□□□□ -0.8
CHMP4A-203ENST00000527154 TRAV34A0A0B4J273 112 aa10.03□□□□□ -0.8
CHMP4A-203ENST00000527154 B4DEV8 164 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 239.2 ms