RNA–Protein interactions for RNA: ENST00000525435.1

CCS-202, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-202ENST00000525435 LYZL1Q6UWQ5 148 aa8.61□□□□□ -1.03
CCS-202ENST00000525435 SLC25A29Q8N8R3 303 aa8.61□□□□□ -1.03
CCS-202ENST00000525435 TSKUQ8WUA8 353 aa8.61□□□□□ -1.03
CCS-202ENST00000525435 A0A096LPF7 62 aa8.6□□□□□ -1.03
CCS-202ENST00000525435 RAB4BP61018 213 aa8.6□□□□□ -1.03
CCS-202ENST00000525435 PNRC1Q12796 327 aaPredicted RBP8.6□□□□□ -1.03
CCS-202ENST00000525435 RHOHQ15669 191 aa8.6□□□□□ -1.03
CCS-202ENST00000525435 ADIRFQ15847 76 aa8.6□□□□□ -1.03
CCS-202ENST00000525435 NEGR1Q7Z3B1 354 aa8.6□□□□□ -1.03
CCS-202ENST00000525435 OR10G8Q8NGN5 311 aa8.6□□□□□ -1.03
CCS-202ENST00000525435 GTSF1Q8WW33 167 aa8.6□□□□□ -1.03
CCS-202ENST00000525435 TPPP3Q9BW30 176 aa8.6□□□□□ -1.03
CCS-202ENST00000525435 SAMD10Q9BYL1 202 aa8.6□□□□□ -1.03
CCS-202ENST00000525435 JPT2Q9H910 190 aa8.6□□□□□ -1.03
CCS-202ENST00000525435 PLECQ15149 4684 aaKnown RBP8.6□□□□□ -1.03
CCS-202ENST00000525435 K7EQD1 137 aa8.59□□□□□ -1.03
CCS-202ENST00000525435 TRGC1P0CF51 173 aa8.59□□□□□ -1.03
CCS-202ENST00000525435 SMIM17P0DL12 118 aa8.59□□□□□ -1.03
CCS-202ENST00000525435 GYPEP15421 78 aa8.59□□□□□ -1.03
CCS-202ENST00000525435 AP1S3Q96PC3 154 aa8.59□□□□□ -1.03
CCS-202ENST00000525435 V9GYV3 84 aa8.59□□□□□ -1.03
CCS-202ENST00000525435 A0A087WWL8 130 aa8.58□□□□□ -1.04
CCS-202ENST00000525435 IGHV3-73A0A0B4J1V6 119 aa8.58□□□□□ -1.04
CCS-202ENST00000525435 TRBV10-1A0A0K0K1A3 114 aa8.58□□□□□ -1.04
CCS-202ENST00000525435 TMEM218A2RU14 115 aa8.58□□□□□ -1.04
CCS-202ENST00000525435 NTF3P20783 257 aa8.58□□□□□ -1.04
CCS-202ENST00000525435 SRIP30626 198 aa8.58□□□□□ -1.04
CCS-202ENST00000525435 TIRAPP58753 221 aa8.58□□□□□ -1.04
CCS-202ENST00000525435 Q6ZSN1 163 aa8.58□□□□□ -1.04
CCS-202ENST00000525435 UBE2DNLQ8IWF7 75 aa8.58□□□□□ -1.04
CCS-202ENST00000525435 KIF25-AS1Q9Y6Z4 181 aa8.58□□□□□ -1.04
CCS-202ENST00000525435 MUC21A0A0G2JKD1 596 aa8.57□□□□□ -1.04
CCS-202ENST00000525435 MUC21A0A140T8X8 626 aa8.57□□□□□ -1.04
CCS-202ENST00000525435 HIGD1CA8MV81 97 aa8.57□□□□□ -1.04
CCS-202ENST00000525435 PPP1R2P9O14990 202 aa8.57□□□□□ -1.04
CCS-202ENST00000525435 ESRGQ1W209 222 aa8.57□□□□□ -1.04
CCS-202ENST00000525435 FAM74A4Q5TZK3 123 aa8.57□□□□□ -1.04
CCS-202ENST00000525435 C14orf178Q8N769 122 aaPredicted RBP8.57□□□□□ -1.04
CCS-202ENST00000525435 BORCS7Q96B45 105 aa8.57□□□□□ -1.04
CCS-202ENST00000525435 A0A1B0GUT8 65 aa8.56□□□□□ -1.04
CCS-202ENST00000525435 LINC00315P59091 139 aa8.56□□□□□ -1.04
CCS-202ENST00000525435 SSTP61278 116 aa8.56□□□□□ -1.04
CCS-202ENST00000525435 TWIST1Q15672 202 aa8.56□□□□□ -1.04
CCS-202ENST00000525435 LYPD5Q6UWN5 251 aa8.56□□□□□ -1.04
CCS-202ENST00000525435 SMIM15Q7Z3B0 74 aa8.56□□□□□ -1.04
CCS-202ENST00000525435 COMMD7Q86VX2 200 aa8.56□□□□□ -1.04
CCS-202ENST00000525435 LYSTQ99698 3801 aa8.56□□□□□ -1.04
CCS-202ENST00000525435 UPK3BQ9BT76 320 aa8.56□□□□□ -1.04
CCS-202ENST00000525435 MSRB1Q9NZV6 116 aa8.56□□□□□ -1.04
CCS-202ENST00000525435 NAT8BQ9UHF3 227 aa8.56□□□□□ -1.04
CCS-202ENST00000525435 LINC00588Q9Y4M8 146 aa8.56□□□□□ -1.04
CCS-202ENST00000525435 NACAE9PAV3 2078 aa8.55□□□□□ -1.04
CCS-202ENST00000525435 SMIM27A0A1W2PRY6 76 aa8.55□□□□□ -1.04
CCS-202ENST00000525435 MT-ND4LP03901 98 aa8.55□□□□□ -1.04
CCS-202ENST00000525435 EVI2AP22794 236 aa8.55□□□□□ -1.04
CCS-202ENST00000525435 ANAPC16Q96DE5 110 aa8.55□□□□□ -1.04
CCS-202ENST00000525435 PGLYRP4Q96LB8 373 aa8.55□□□□□ -1.04
CCS-202ENST00000525435 SEC11CQ9BY50 192 aa8.55□□□□□ -1.04
CCS-202ENST00000525435 DPH3P1Q9H4G8 78 aa8.55□□□□□ -1.04
CCS-202ENST00000525435 MRPS16Q9Y3D3 137 aaKnown RBP8.55□□□□□ -1.04
CCS-202ENST00000525435 DNAH1Q9P2D7 4330 aa8.55□□□□□ -1.04
CCS-202ENST00000525435 ALMS1Q8TCU4 4167 aa8.54□□□□□ -1.04
CCS-202ENST00000525435 F5H697 171 aa8.54□□□□□ -1.04
CCS-202ENST00000525435 F8W036 122 aa8.54□□□□□ -1.04
CCS-202ENST00000525435 H7C1H1 209 aa8.54□□□□□ -1.04
CCS-202ENST00000525435 NUP35Q8NFH5 326 aa8.54□□□□□ -1.04
CCS-202ENST00000525435 ZNRF2Q8NHG8 242 aa8.54□□□□□ -1.04
CCS-202ENST00000525435 FRZBQ92765 325 aa8.54□□□□□ -1.04
CCS-202ENST00000525435 TRBV7-3A0A075B6L6 115 aa8.53□□□□□ -1.04
CCS-202ENST00000525435 LOC100131303A0A0U1RQF7 123 aa8.53□□□□□ -1.04
CCS-202ENST00000525435 A0A1B0GW15 77 aa8.53□□□□□ -1.04
CCS-202ENST00000525435 LINC00694P0DN24 101 aa8.53□□□□□ -1.04
CCS-202ENST00000525435 RPL36AP83881 106 aaKnown RBP8.53□□□□□ -1.04
CCS-202ENST00000525435 RIGQ13278 110 aa8.53□□□□□ -1.04
CCS-202ENST00000525435 ZNF56Q15929 161 aa8.53□□□□□ -1.04
CCS-202ENST00000525435 ATP6V0E2Q8NHE4 81 aa8.53□□□□□ -1.04
CCS-202ENST00000525435 RPL36ALQ969Q0 106 aaKnown RBP8.53□□□□□ -1.04
CCS-202ENST00000525435 GTSF1LQ9H1H1 148 aa8.53□□□□□ -1.04
CCS-202ENST00000525435 A0A087WWC5 75 aa8.52□□□□□ -1.05
CCS-202ENST00000525435 K7EP13 123 aa8.52□□□□□ -1.05
CCS-202ENST00000525435 M0QY20 66 aa8.52□□□□□ -1.05
CCS-202ENST00000525435 C10orf91Q5T1B1 145 aa8.52□□□□□ -1.05
CCS-202ENST00000525435 DNAJC30Q96LL9 226 aa8.52□□□□□ -1.05
CCS-202ENST00000525435 Q9H8V8 135 aa8.52□□□□□ -1.05
CCS-202ENST00000525435 VPS13DQ5THJ4 4388 aa8.51□□□□□ -1.05
CCS-202ENST00000525435 GAGE12JA6NER3 117 aa8.51□□□□□ -1.05
CCS-202ENST00000525435 ADCYAP1P18509 176 aa8.51□□□□□ -1.05
CCS-202ENST00000525435 GAGE1Q13065 139 aa8.51□□□□□ -1.05
CCS-202ENST00000525435 GAGE4Q13068 117 aa8.51□□□□□ -1.05
CCS-202ENST00000525435 GAGE5Q13069 117 aa8.51□□□□□ -1.05
CCS-202ENST00000525435 GAGE13Q4V321 117 aa8.51□□□□□ -1.05
CCS-202ENST00000525435 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.51□□□□□ -1.05
CCS-202ENST00000525435 TMEM191AQ9H0A3 160 aa8.51□□□□□ -1.05
CCS-202ENST00000525435 SACSQ9NZJ4 4579 aa8.51□□□□□ -1.05
CCS-202ENST00000525435 S100A8P05109 93 aa8.5□□□□□ -1.05
CCS-202ENST00000525435 MGPP08493 103 aa8.5□□□□□ -1.05
CCS-202ENST00000525435 BTF3P20290 206 aaKnown RBP8.5□□□□□ -1.05
CCS-202ENST00000525435 UBE2D3P61077 147 aa8.5□□□□□ -1.05
CCS-202ENST00000525435 UBE2D2P62837 147 aa8.5□□□□□ -1.05
CCS-202ENST00000525435 LELP1Q5T871 98 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 261.5 ms