RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 PRR32B1ATL7 298 aa5.71□□□□□ -1.5
HDAC3-216ENST00000523088 F6UB75 175 aa5.71□□□□□ -1.5
HDAC3-216ENST00000523088 J3QLW9 94 aa5.71□□□□□ -1.5
HDAC3-216ENST00000523088 PIN1P1O15428 100 aa5.71□□□□□ -1.5
HDAC3-216ENST00000523088 NDUFC1O43677 76 aa5.71□□□□□ -1.5
HDAC3-216ENST00000523088 LY6HO94772 140 aa5.71□□□□□ -1.5
HDAC3-216ENST00000523088 IGHV3-13P01766 116 aa5.71□□□□□ -1.5
HDAC3-216ENST00000523088 MSMPQ1L6U9 139 aa5.71□□□□□ -1.5
HDAC3-216ENST00000523088 WDR38Q5JTN6 314 aa5.71□□□□□ -1.5
HDAC3-216ENST00000523088 FAM222AQ5U5X8 452 aa5.71□□□□□ -1.5
HDAC3-216ENST00000523088 FOXL2NBQ6ZUU3 175 aa5.71□□□□□ -1.5
HDAC3-216ENST00000523088 PFN4Q8NHR9 129 aa5.71□□□□□ -1.5
HDAC3-216ENST00000523088 FGFBP3Q8TAT2 258 aa5.71□□□□□ -1.5
HDAC3-216ENST00000523088 DCANP1Q8TF63 244 aa5.71□□□□□ -1.5
HDAC3-216ENST00000523088 RITA1Q96K30 269 aa5.71□□□□□ -1.5
HDAC3-216ENST00000523088 ZNF492Q9P255 531 aa5.71□□□□□ -1.5
HDAC3-216ENST00000523088 CUBNO60494 3623 aa5.7□□□□□ -1.5
HDAC3-216ENST00000523088 STAB1Q9NY15 2570 aa5.7□□□□□ -1.5
HDAC3-216ENST00000523088 DOCK11Q5JSL3 2073 aa5.7□□□□□ -1.5
HDAC3-216ENST00000523088 TRBV5-7A0A0A0MS05 114 aa5.7□□□□□ -1.5
HDAC3-216ENST00000523088 TRAV41A0A0B4J266 112 aa5.7□□□□□ -1.5
HDAC3-216ENST00000523088 C19orf71A6NCJ1 209 aa5.7□□□□□ -1.5
HDAC3-216ENST00000523088 MSMBP08118 114 aa5.7□□□□□ -1.5
HDAC3-216ENST00000523088 ZNF32P17041 273 aa5.7□□□□□ -1.5
HDAC3-216ENST00000523088 PSMB2P49721 201 aa5.7□□□□□ -1.5
HDAC3-216ENST00000523088 SYNJ2BPP57105 145 aa5.7□□□□□ -1.5
HDAC3-216ENST00000523088 PIK3CD-AS1Q5SR53 167 aa5.7□□□□□ -1.5
HDAC3-216ENST00000523088 MIC13Q5XKP0 118 aa5.7□□□□□ -1.5
HDAC3-216ENST00000523088 LCA10Q71F78 164 aa5.7□□□□□ -1.5
HDAC3-216ENST00000523088 Q8N2B8 174 aa5.7□□□□□ -1.5
HDAC3-216ENST00000523088 GVQW1Q8N7I0 195 aa5.7□□□□□ -1.5
HDAC3-216ENST00000523088 TOMM6Q96B49 74 aa5.7□□□□□ -1.5
HDAC3-216ENST00000523088 C17orf77Q96MU5 243 aa5.7□□□□□ -1.5
HDAC3-216ENST00000523088 MDFIQ99750 246 aa5.7□□□□□ -1.5
HDAC3-216ENST00000523088 TP73-AS1Q9UF72 201 aa5.7□□□□□ -1.5
HDAC3-216ENST00000523088 SVEP1Q4LDE5 3571 aa5.69□□□□□ -1.5
HDAC3-216ENST00000523088 SMIM27A0A1W2PRY6 76 aa5.69□□□□□ -1.5
HDAC3-216ENST00000523088 H3BMM0 161 aa5.69□□□□□ -1.5
HDAC3-216ENST00000523088 HBBP68871 147 aa5.69□□□□□ -1.5
HDAC3-216ENST00000523088 ZNF816Q0VGE8 651 aaPredicted RBP5.69□□□□□ -1.5
HDAC3-216ENST00000523088 UBE2WQ96B02 151 aa5.69□□□□□ -1.5
HDAC3-216ENST00000523088 C4orf45Q96LM5 186 aa5.69□□□□□ -1.5
HDAC3-216ENST00000523088 MOB4Q9Y3A3 225 aa5.69□□□□□ -1.5
HDAC3-216ENST00000523088 DYSFO75923 2080 aa5.68□□□□□ -1.5
HDAC3-216ENST00000523088 IBA57-AS1B1ANH7 110 aa5.68□□□□□ -1.5
HDAC3-216ENST00000523088 H3BP45 60 aa5.68□□□□□ -1.5
HDAC3-216ENST00000523088 FFAR1O14842 300 aa5.68□□□□□ -1.5
HDAC3-216ENST00000523088 ZNF73O43830 326 aaPredicted RBP5.68□□□□□ -1.5
HDAC3-216ENST00000523088 PATE4P0C8F1 98 aa5.68□□□□□ -1.5
HDAC3-216ENST00000523088 FXYD6P3P58550 94 aa5.68□□□□□ -1.5
HDAC3-216ENST00000523088 ABCA11PQ4W5N1 156 aa5.68□□□□□ -1.5
HDAC3-216ENST00000523088 C1orf100Q5SVJ3 147 aa5.68□□□□□ -1.5
HDAC3-216ENST00000523088 CEMP1Q6PRD7 247 aaPredicted RBP5.68□□□□□ -1.5
HDAC3-216ENST00000523088 CLEC19AQ6UXS0 136 aa5.68□□□□□ -1.5
HDAC3-216ENST00000523088 Q6ZVQ6 151 aa5.68□□□□□ -1.5
HDAC3-216ENST00000523088 MKXQ8IYA7 352 aa5.68□□□□□ -1.5
HDAC3-216ENST00000523088 C6orf223Q8N319 242 aa5.68□□□□□ -1.5
HDAC3-216ENST00000523088 TMEM75Q8N9X5 138 aa5.68□□□□□ -1.5
HDAC3-216ENST00000523088 TMEM243Q9BU79 118 aa5.68□□□□□ -1.5
HDAC3-216ENST00000523088 ZNF747Q9BV97 191 aa5.68□□□□□ -1.5
HDAC3-216ENST00000523088 V9GYV3 84 aa5.68□□□□□ -1.5
HDAC3-216ENST00000523088 FBN1P35555 2871 aaKnown RBP5.67□□□□□ -1.5
HDAC3-216ENST00000523088 TRBV10-2A0A0K0K1G8 114 aa5.67□□□□□ -1.5
HDAC3-216ENST00000523088 CRYM-AS1A6NIL9 109 aa5.67□□□□□ -1.5
HDAC3-216ENST00000523088 MGST3O14880 152 aa5.67□□□□□ -1.5
HDAC3-216ENST00000523088 TIMM17BO60830 172 aa5.67□□□□□ -1.5
HDAC3-216ENST00000523088 ZNF329Q86UD4 541 aa5.67□□□□□ -1.5
HDAC3-216ENST00000523088 NDUFA11Q86Y39 141 aa5.67□□□□□ -1.5
HDAC3-216ENST00000523088 KLF14Q8TD94 323 aaPredicted RBP5.67□□□□□ -1.5
HDAC3-216ENST00000523088 C11orf52Q96A22 123 aa5.67□□□□□ -1.5
HDAC3-216ENST00000523088 VSIG2Q96IQ7 327 aa5.67□□□□□ -1.5
HDAC3-216ENST00000523088 PGLYRP4Q96LB8 373 aa5.67□□□□□ -1.5
HDAC3-216ENST00000523088 TRBV20OR9-2A0A075B6H5 130 aa5.66□□□□□ -1.5
HDAC3-216ENST00000523088 TRBV7-3A0A075B6L6 115 aa5.66□□□□□ -1.5
HDAC3-216ENST00000523088 TRBV25-1A0A075B6N4 114 aa5.66□□□□□ -1.5
HDAC3-216ENST00000523088 C11orf94C9JXX5 98 aa5.66□□□□□ -1.5
HDAC3-216ENST00000523088 K7ERJ3 54 aa5.66□□□□□ -1.5
HDAC3-216ENST00000523088 PRYO14603 147 aa5.66□□□□□ -1.5
HDAC3-216ENST00000523088 FSTL3O95633 263 aa5.66□□□□□ -1.5
HDAC3-216ENST00000523088 IGHV1-46P01743 117 aa5.66□□□□□ -1.5
HDAC3-216ENST00000523088 UBE2D1P51668 147 aa5.66□□□□□ -1.5
HDAC3-216ENST00000523088 Q8N8P6 123 aa5.66□□□□□ -1.5
HDAC3-216ENST00000523088 URB1-AS1Q96HZ7 61 aa5.66□□□□□ -1.5
HDAC3-216ENST00000523088 Q96M66 194 aa5.66□□□□□ -1.5
HDAC3-216ENST00000523088 Q96M85 177 aa5.66□□□□□ -1.5
HDAC3-216ENST00000523088 OVOL2Q9BRP0 275 aa5.66□□□□□ -1.5
HDAC3-216ENST00000523088 LINC00588Q9Y4M8 146 aa5.66□□□□□ -1.5
HDAC3-216ENST00000523088 IGKV1D-43A0A0B4J1Z2 117 aa5.65□□□□□ -1.5
HDAC3-216ENST00000523088 A0A0B4J2C4 111 aa5.65□□□□□ -1.5
HDAC3-216ENST00000523088 LYNX1G3V0Z9 82 aa5.65□□□□□ -1.5
HDAC3-216ENST00000523088 CCKP06307 115 aa5.65□□□□□ -1.5
HDAC3-216ENST00000523088 LYNX1P0DP58 116 aa5.65□□□□□ -1.5
HDAC3-216ENST00000523088 DYNLT3P51808 116 aa5.65□□□□□ -1.5
HDAC3-216ENST00000523088 LMO4P61968 165 aa5.65□□□□□ -1.5
HDAC3-216ENST00000523088 RIGQ13278 110 aa5.65□□□□□ -1.5
HDAC3-216ENST00000523088 FHL1Q13642 323 aa5.65□□□□□ -1.5
HDAC3-216ENST00000523088 KRTAP24-1Q3LI83 254 aa5.65□□□□□ -1.5
HDAC3-216ENST00000523088 PAPPA-AS1Q5QFB9 102 aa5.65□□□□□ -1.5
HDAC3-216ENST00000523088 NTN5Q8WTR8 489 aaPredicted RBP5.65□□□□□ -1.5
HDAC3-216ENST00000523088 TAF15Q92804 592 aaKnown RBP eCLIP5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms