RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 AMTNQ6UX39 209 aa8.63□□□□□ -1.03
PCDHGB4-201ENST00000519479 TRPT1Q86TN4 253 aaKnown RBP8.63□□□□□ -1.03
PCDHGB4-201ENST00000519479 SCRT2Q9NQ03 307 aa8.63□□□□□ -1.03
PCDHGB4-201ENST00000519479 SMAD5-AS1Q9Y6J3 95 aa8.63□□□□□ -1.03
PCDHGB4-201ENST00000519479 HOXD3P31249 432 aaPredicted RBP8.63□□□□□ -1.03
PCDHGB4-201ENST00000519479 LINC01619G3V211 115 aa8.63□□□□□ -1.03
PCDHGB4-201ENST00000519479 TAX1BP3O14907 124 aa8.63□□□□□ -1.03
PCDHGB4-201ENST00000519479 PPDPFLQ8WWR9 84 aa8.63□□□□□ -1.03
PCDHGB4-201ENST00000519479 RPL39LQ96EH5 51 aaKnown RBP8.63□□□□□ -1.03
PCDHGB4-201ENST00000519479 C2CD3Q4AC94 2353 aa8.62□□□□□ -1.03
PCDHGB4-201ENST00000519479 COPS9Q8WXC6 57 aa8.62□□□□□ -1.03
PCDHGB4-201ENST00000519479 ZFAND3Q9H8U3 227 aa8.62□□□□□ -1.03
PCDHGB4-201ENST00000519479 ZFYVE26Q68DK2 2539 aa8.62□□□□□ -1.03
PCDHGB4-201ENST00000519479 TRGV1A0A0A0MS02 117 aa8.62□□□□□ -1.03
PCDHGB4-201ENST00000519479 C9JAW5 83 aa8.62□□□□□ -1.03
PCDHGB4-201ENST00000519479 A0A087WX48 190 aa8.62□□□□□ -1.03
PCDHGB4-201ENST00000519479 K7ERJ3 54 aa8.62□□□□□ -1.03
PCDHGB4-201ENST00000519479 DEFB136Q30KP8 78 aa8.62□□□□□ -1.03
PCDHGB4-201ENST00000519479 SS18L2Q9UHA2 77 aa8.62□□□□□ -1.03
PCDHGB4-201ENST00000519479 RAI1Q7Z5J4 1906 aaPredicted RBP8.62□□□□□ -1.03
PCDHGB4-201ENST00000519479 ZNF292O60281 2723 aa8.62□□□□□ -1.03
PCDHGB4-201ENST00000519479 A6NDX4 124 aa8.61□□□□□ -1.03
PCDHGB4-201ENST00000519479 B5MCH6 92 aa8.61□□□□□ -1.03
PCDHGB4-201ENST00000519479 INSP01308 110 aa8.61□□□□□ -1.03
PCDHGB4-201ENST00000519479 RNASE1P07998 156 aaKnown RBP8.61□□□□□ -1.03
PCDHGB4-201ENST00000519479 HLA-DRB4P13762 266 aa8.61□□□□□ -1.03
PCDHGB4-201ENST00000519479 RBX1P62877 108 aa8.61□□□□□ -1.03
PCDHGB4-201ENST00000519479 TMEM101Q96IK0 257 aa8.61□□□□□ -1.03
PCDHGB4-201ENST00000519479 XCL2Q9UBD3 114 aa8.61□□□□□ -1.03
PCDHGB4-201ENST00000519479 HLA-DRB4X5D2U9 266 aa8.61□□□□□ -1.03
PCDHGB4-201ENST00000519479 IGLC6P0CF74 106 aa8.61□□□□□ -1.03
PCDHGB4-201ENST00000519479 EPG5Q9HCE0 2579 aa8.61□□□□□ -1.03
PCDHGB4-201ENST00000519479 PMVKQ15126 192 aa8.61□□□□□ -1.03
PCDHGB4-201ENST00000519479 DSPP15924 2871 aaKnown RBP8.61□□□□□ -1.03
PCDHGB4-201ENST00000519479 IGHV3-53P01767 116 aa8.61□□□□□ -1.03
PCDHGB4-201ENST00000519479 LGALS1P09382 135 aaKnown RBP8.61□□□□□ -1.03
PCDHGB4-201ENST00000519479 MRGPRG-AS1Q2M3A8 158 aa8.61□□□□□ -1.03
PCDHGB4-201ENST00000519479 PHLDA1Q8WV24 401 aaPredicted RBP8.61□□□□□ -1.03
PCDHGB4-201ENST00000519479 AKAP13Q12802 2813 aa8.61□□□□□ -1.03
PCDHGB4-201ENST00000519479 C2orf82Q6UX34 121 aa8.6□□□□□ -1.03
PCDHGB4-201ENST00000519479 PRADC1Q9BSG0 188 aa8.6□□□□□ -1.03
PCDHGB4-201ENST00000519479 A0A1W2PPR1 153 aa8.6□□□□□ -1.03
PCDHGB4-201ENST00000519479 SPANXA1Q9NS26 97 aa8.6□□□□□ -1.03
PCDHGB4-201ENST00000519479 SIVA1O15304 175 aa8.59□□□□□ -1.03
PCDHGB4-201ENST00000519479 TP73-AS1Q9UF72 201 aa8.59□□□□□ -1.03
PCDHGB4-201ENST00000519479 COL27A1Q8IZC6 1860 aaPredicted RBP8.59□□□□□ -1.03
PCDHGB4-201ENST00000519479 PRSS29PA6NIE9 313 aa8.59□□□□□ -1.03
PCDHGB4-201ENST00000519479 SRSF2Q01130 221 aaKnown RBP8.59□□□□□ -1.03
PCDHGB4-201ENST00000519479 GAGE5Q13069 117 aa8.59□□□□□ -1.03
PCDHGB4-201ENST00000519479 GAGE6Q13070 117 aa8.59□□□□□ -1.03
PCDHGB4-201ENST00000519479 SH2D6Q7Z4S9 175 aa8.59□□□□□ -1.03
PCDHGB4-201ENST00000519479 UBE2DNLQ8IWF7 75 aa8.59□□□□□ -1.03
PCDHGB4-201ENST00000519479 TTTY13Q9BZ97 58 aa8.59□□□□□ -1.03
PCDHGB4-201ENST00000519479 MYMXA0A1B0GTQ4 84 aa8.59□□□□□ -1.03
PCDHGB4-201ENST00000519479 IGF1P05019 195 aa8.59□□□□□ -1.03
PCDHGB4-201ENST00000519479 TMEM141Q96I45 108 aa8.59□□□□□ -1.03
PCDHGB4-201ENST00000519479 SPXQ9BT56 116 aa8.59□□□□□ -1.03
PCDHGB4-201ENST00000519479 SPATA12Q7Z6I5 190 aa8.59□□□□□ -1.03
PCDHGB4-201ENST00000519479 BBC3Q96PG8 261 aaPredicted RBP8.59□□□□□ -1.03
PCDHGB4-201ENST00000519479 ATXN8Q156A1 80 aa8.58□□□□□ -1.04
PCDHGB4-201ENST00000519479 PLEKHB2Q96CS7 222 aa8.58□□□□□ -1.04
PCDHGB4-201ENST00000519479 TOMM7Q9P0U1 55 aa8.58□□□□□ -1.04
PCDHGB4-201ENST00000519479 TRGV4A0A0C4DH28 118 aa8.58□□□□□ -1.04
PCDHGB4-201ENST00000519479 IGHV3-16A0A0C4DH30 117 aa8.58□□□□□ -1.04
PCDHGB4-201ENST00000519479 GAGE12JA6NER3 117 aa8.58□□□□□ -1.04
PCDHGB4-201ENST00000519479 I3L3M4 83 aa8.58□□□□□ -1.04
PCDHGB4-201ENST00000519479 K7EMT4 169 aa8.58□□□□□ -1.04
PCDHGB4-201ENST00000519479 GAGE7O76087 117 aa8.58□□□□□ -1.04
PCDHGB4-201ENST00000519479 GAGE12FP0CL80 117 aa8.58□□□□□ -1.04
PCDHGB4-201ENST00000519479 GAGE12GP0CL81 117 aa8.58□□□□□ -1.04
PCDHGB4-201ENST00000519479 GAGE12IP0CL82 117 aa8.58□□□□□ -1.04
PCDHGB4-201ENST00000519479 GAGE4Q13068 117 aa8.58□□□□□ -1.04
PCDHGB4-201ENST00000519479 FOXI2Q6ZQN5 318 aa8.58□□□□□ -1.04
PCDHGB4-201ENST00000519479 A0A0U1RRA0 63 aa8.58□□□□□ -1.04
PCDHGB4-201ENST00000519479 RPL35AP18077 110 aaKnown RBP8.58□□□□□ -1.04
PCDHGB4-201ENST00000519479 Q71RC1 249 aaPredicted RBP8.58□□□□□ -1.04
PCDHGB4-201ENST00000519479 GPHB5Q86YW7 130 aa8.58□□□□□ -1.04
PCDHGB4-201ENST00000519479 SPENQ96T58 3664 aaKnown RBP8.58□□□□□ -1.04
PCDHGB4-201ENST00000519479 NACAE9PAV3 2078 aa8.58□□□□□ -1.04
PCDHGB4-201ENST00000519479 TRAV26-1A0A087WT03 109 aa8.58□□□□□ -1.04
PCDHGB4-201ENST00000519479 SLURP1P55000 103 aa8.58□□□□□ -1.04
PCDHGB4-201ENST00000519479 RPL36AP83881 106 aaKnown RBP8.58□□□□□ -1.04
PCDHGB4-201ENST00000519479 OR13C6PQ8NH95 151 aa8.58□□□□□ -1.04
PCDHGB4-201ENST00000519479 RPL36ALQ969Q0 106 aaKnown RBP8.58□□□□□ -1.04
PCDHGB4-201ENST00000519479 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.57□□□□□ -1.04
PCDHGB4-201ENST00000519479 C9orf153Q5TBE3 101 aa8.57□□□□□ -1.04
PCDHGB4-201ENST00000519479 SPAG8Q99932 426 aaPredicted RBP8.57□□□□□ -1.04
PCDHGB4-201ENST00000519479 TRBV25-1A0A075B6N4 114 aa8.57□□□□□ -1.04
PCDHGB4-201ENST00000519479 SETD2Q9BYW2 2564 aaPredicted RBP8.57□□□□□ -1.04
PCDHGB4-201ENST00000519479 IGHV4OR15-8A0A075B7B6 117 aa8.57□□□□□ -1.04
PCDHGB4-201ENST00000519479 A0A087WW49 117 aa8.57□□□□□ -1.04
PCDHGB4-201ENST00000519479 PRSS47A8MTI9 375 aa8.57□□□□□ -1.04
PCDHGB4-201ENST00000519479 K7EMI3 77 aa8.57□□□□□ -1.04
PCDHGB4-201ENST00000519479 SMIM20Q8N5G0 67 aa8.57□□□□□ -1.04
PCDHGB4-201ENST00000519479 G3V4G9 280 aa8.56□□□□□ -1.04
PCDHGB4-201ENST00000519479 MRPS12O15235 138 aaKnown RBP8.56□□□□□ -1.04
PCDHGB4-201ENST00000519479 CITED2Q99967 270 aaPredicted RBP8.56□□□□□ -1.04
PCDHGB4-201ENST00000519479 TRBV20-1A0A075B6N2 111 aa8.56□□□□□ -1.04
PCDHGB4-201ENST00000519479 M0R2P5 195 aa8.56□□□□□ -1.04
PCDHGB4-201ENST00000519479 IFITM1P13164 125 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms