RNA–Protein interactions for RNA: ENST00000516259.1

RNU6-390P-201, Transcript of RNA, U6 small nuclear 390, pseudogene, humanhuman

BASIC

Gene RNU6-390P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-390P-201ENST00000516259 CDK5RAP2Q96SN8 1893 aa0.44□□□□□ -2.34
RNU6-390P-201ENST00000516259 NAV3Q8IVL0 2385 aa0.43□□□□□ -2.34
RNU6-390P-201ENST00000516259 KDM6BO15054 1643 aa0.43□□□□□ -2.34
RNU6-390P-201ENST00000516259 LOC285556D6RIA3 1793 aa0.43□□□□□ -2.34
RNU6-390P-201ENST00000516259 A0A087WTM6 91 aa0.43□□□□□ -2.34
RNU6-390P-201ENST00000516259 TRAV12-3A0A0B4J271 114 aa0.43□□□□□ -2.34
RNU6-390P-201ENST00000516259 MIC13Q5XKP0 118 aa0.43□□□□□ -2.34
RNU6-390P-201ENST00000516259 CCDC167Q9P0B6 97 aa0.43□□□□□ -2.34
RNU6-390P-201ENST00000516259 TANC1Q9C0D5 1861 aa0.42□□□□□ -2.34
RNU6-390P-201ENST00000516259 K7ERU9 68 aa0.42□□□□□ -2.34
RNU6-390P-201ENST00000516259 KRTAP2-3P0C7H8 128 aa0.42□□□□□ -2.34
RNU6-390P-201ENST00000516259 PIRTP0C851 137 aa0.42□□□□□ -2.34
RNU6-390P-201ENST00000516259 NPC2P61916 151 aa0.42□□□□□ -2.34
RNU6-390P-201ENST00000516259 COPZ1P61923 177 aa0.42□□□□□ -2.34
RNU6-390P-201ENST00000516259 C9orf116Q5BN46 136 aaPredicted RBP0.42□□□□□ -2.34
RNU6-390P-201ENST00000516259 TSTD1Q8NFU3 115 aa0.42□□□□□ -2.34
RNU6-390P-201ENST00000516259 SDF2Q99470 211 aa0.42□□□□□ -2.34
RNU6-390P-201ENST00000516259 KRTAP2-4Q9BYR9 128 aa0.42□□□□□ -2.34
RNU6-390P-201ENST00000516259 KRTAP2-1Q9BYU5 128 aa0.42□□□□□ -2.34
RNU6-390P-201ENST00000516259 BPESC1Q9GZL8 116 aa0.42□□□□□ -2.34
RNU6-390P-201ENST00000516259 AKAP11Q9UKA4 1901 aa0.41□□□□□ -2.34
RNU6-390P-201ENST00000516259 IFNA17P01571 189 aa0.41□□□□□ -2.34
RNU6-390P-201ENST00000516259 HMGN1P05114 100 aa0.41□□□□□ -2.34
RNU6-390P-201ENST00000516259 PIPP12273 146 aaPredicted RBP0.41□□□□□ -2.34
RNU6-390P-201ENST00000516259 ARPC4P59998 168 aa0.41□□□□□ -2.34
RNU6-390P-201ENST00000516259 FAM74A4Q5TZK3 123 aa0.41□□□□□ -2.34
RNU6-390P-201ENST00000516259 COX7B2Q8TF08 81 aa0.41□□□□□ -2.34
RNU6-390P-201ENST00000516259 PSMG3Q9BT73 122 aaPredicted RBP0.41□□□□□ -2.34
RNU6-390P-201ENST00000516259 PLXNA1Q9UIW2 1896 aa0.41□□□□□ -2.34
RNU6-390P-201ENST00000516259 KIAA0100Q14667 2235 aaKnown RBP0.41□□□□□ -2.34
RNU6-390P-201ENST00000516259 MEGF8Q7Z7M0 2845 aa0.41□□□□□ -2.34
RNU6-390P-201ENST00000516259 AHNAKQ09666 5890 aaKnown RBP0.41□□□□□ -2.34
RNU6-390P-201ENST00000516259 KIF13AQ9H1H9 1805 aa0.41□□□□□ -2.34
RNU6-390P-201ENST00000516259 BICRAQ9NZM4 1560 aa0.4□□□□□ -2.34
RNU6-390P-201ENST00000516259 LAMC3Q9Y6N6 1575 aa0.4□□□□□ -2.34
RNU6-390P-201ENST00000516259 MYH13Q9UKX3 1938 aa0.4□□□□□ -2.34
RNU6-390P-201ENST00000516259 SOGA1O94964 1423 aa0.4□□□□□ -2.34
RNU6-390P-201ENST00000516259 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.4□□□□□ -2.35
RNU6-390P-201ENST00000516259 RBBP6Q7Z6E9 1792 aaKnown RBP0.4□□□□□ -2.35
RNU6-390P-201ENST00000516259 F2Z2F3 143 aa0.39□□□□□ -2.35
RNU6-390P-201ENST00000516259 TFF1P04155 84 aa0.39□□□□□ -2.35
RNU6-390P-201ENST00000516259 SELENOWP63302 87 aa0.39□□□□□ -2.35
RNU6-390P-201ENST00000516259 VMO1Q7Z5L0 202 aa0.39□□□□□ -2.35
RNU6-390P-201ENST00000516259 C4orf33Q8N1A6 199 aa0.39□□□□□ -2.35
RNU6-390P-201ENST00000516259 C20orf197Q8N268 126 aa0.39□□□□□ -2.35
RNU6-390P-201ENST00000516259 SMIM11BQ8TCY0 68 aa0.39□□□□□ -2.35
RNU6-390P-201ENST00000516259 PRR15LQ9BU68 103 aa0.39□□□□□ -2.35
RNU6-390P-201ENST00000516259 RPRMQ9NS64 109 aa0.39□□□□□ -2.35
RNU6-390P-201ENST00000516259 TMEM242Q9NWH2 141 aa0.39□□□□□ -2.35
RNU6-390P-201ENST00000516259 PXDNQ92626 1479 aa0.39□□□□□ -2.35
RNU6-390P-201ENST00000516259 JMJD1CQ15652 2540 aa0.39□□□□□ -2.35
RNU6-390P-201ENST00000516259 BDP1A6H8Y1 2624 aa0.39□□□□□ -2.35
RNU6-390P-201ENST00000516259 UNC13BO14795 1591 aa0.38□□□□□ -2.35
RNU6-390P-201ENST00000516259 BCL9LQ86UU0 1499 aa0.38□□□□□ -2.35
RNU6-390P-201ENST00000516259 GVQW2A0A096LPI5 108 aaPredicted RBP0.38□□□□□ -2.35
RNU6-390P-201ENST00000516259 TRBV7-1A0A0A6YYK4 115 aa0.38□□□□□ -2.35
RNU6-390P-201ENST00000516259 NDUFB6O95139 128 aa0.38□□□□□ -2.35
RNU6-390P-201ENST00000516259 CBLN1P23435 193 aa0.38□□□□□ -2.35
RNU6-390P-201ENST00000516259 UBE2D1P51668 147 aa0.38□□□□□ -2.35
RNU6-390P-201ENST00000516259 ZNF818PQ6ZRF7 136 aa0.38□□□□□ -2.35
RNU6-390P-201ENST00000516259 KCNRGQ8N5I3 272 aa0.38□□□□□ -2.35
RNU6-390P-201ENST00000516259 SPTSSAQ969W0 71 aa0.38□□□□□ -2.35
RNU6-390P-201ENST00000516259 DPH3Q96FX2 82 aa0.38□□□□□ -2.35
RNU6-390P-201ENST00000516259 SCP2D1Q9UJQ7 156 aa0.38□□□□□ -2.35
RNU6-390P-201ENST00000516259 V9GYV3 84 aa0.38□□□□□ -2.35
RNU6-390P-201ENST00000516259 ZNF518AQ6AHZ1 1483 aa0.37□□□□□ -2.35
RNU6-390P-201ENST00000516259 IFT140Q96RY7 1462 aa0.37□□□□□ -2.35
RNU6-390P-201ENST00000516259 MYH6P13533 1939 aa0.37□□□□□ -2.35
RNU6-390P-201ENST00000516259 FAM92AA1XBS5 289 aa0.37□□□□□ -2.35
RNU6-390P-201ENST00000516259 M0R129 80 aa0.37□□□□□ -2.35
RNU6-390P-201ENST00000516259 NDUFA2O43678 99 aa0.37□□□□□ -2.35
RNU6-390P-201ENST00000516259 IL5P05113 134 aa0.37□□□□□ -2.35
RNU6-390P-201ENST00000516259 CCDC58Q4VC31 144 aa0.37□□□□□ -2.35
RNU6-390P-201ENST00000516259 C1orf54Q8WWF1 131 aa0.37□□□□□ -2.35
RNU6-390P-201ENST00000516259 COPS9Q8WXC6 57 aa0.37□□□□□ -2.35
RNU6-390P-201ENST00000516259 Q96NJ1 140 aa0.37□□□□□ -2.35
RNU6-390P-201ENST00000516259 PROK2Q9HC23 129 aa0.37□□□□□ -2.35
RNU6-390P-201ENST00000516259 LRRC37A3O60309 1634 aa0.37□□□□□ -2.35
RNU6-390P-201ENST00000516259 ABCA1O95477 2261 aa0.36□□□□□ -2.35
RNU6-390P-201ENST00000516259 MUC5BQ9HC84 5762 aaPredicted RBP0.36□□□□□ -2.35
RNU6-390P-201ENST00000516259 TNS1Q9HBL0 1735 aaKnown RBP0.36□□□□□ -2.35
RNU6-390P-201ENST00000516259 NRXN2Q9P2S2 1712 aa0.36□□□□□ -2.35
RNU6-390P-201ENST00000516259 A6NIN4 97 aa0.36□□□□□ -2.35
RNU6-390P-201ENST00000516259 Q5VV11 94 aa0.36□□□□□ -2.35
RNU6-390P-201ENST00000516259 RPL7L1Q6DKI1 246 aaKnown RBP0.36□□□□□ -2.35
RNU6-390P-201ENST00000516259 SPINK6Q6UWN8 80 aa0.36□□□□□ -2.35
RNU6-390P-201ENST00000516259 SNRNP25Q9BV90 132 aaKnown RBP0.36□□□□□ -2.35
RNU6-390P-201ENST00000516259 PARP14Q460N5 1801 aa0.36□□□□□ -2.35
RNU6-390P-201ENST00000516259 PHIPQ8WWQ0 1821 aa0.36□□□□□ -2.35
RNU6-390P-201ENST00000516259 IBTKQ9P2D0 1353 aaPredicted RBP0.35□□□□□ -2.35
RNU6-390P-201ENST00000516259 MUC22E2RYF6 1773 aaPredicted RBP0.35□□□□□ -2.35
RNU6-390P-201ENST00000516259 CLPSL1A2RUU4 121 aa0.35□□□□□ -2.35
RNU6-390P-201ENST00000516259 K7EP13 123 aa0.35□□□□□ -2.35
RNU6-390P-201ENST00000516259 APODP05090 189 aa0.35□□□□□ -2.35
RNU6-390P-201ENST00000516259 BTG2P78543 158 aa0.35□□□□□ -2.35
RNU6-390P-201ENST00000516259 CCL8P80075 99 aa0.35□□□□□ -2.35
RNU6-390P-201ENST00000516259 LINC00470Q9BZP3 86 aa0.35□□□□□ -2.35
RNU6-390P-201ENST00000516259 SPEF2Q9C093 1822 aa0.35□□□□□ -2.35
RNU6-390P-201ENST00000516259 CFTRP13569 1480 aa0.35□□□□□ -2.35
RNU6-390P-201ENST00000516259 CACNA1EQ15878 2313 aa0.35□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms