RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 MEF2BQ02080 365 aaPredicted RBP7.86□□□□□ -1.15
SH3RF1-205ENST00000511421 CENPWQ5EE01 88 aa7.86□□□□□ -1.15
SH3RF1-205ENST00000511421 PRR27Q6MZM9 219 aa7.86□□□□□ -1.15
SH3RF1-205ENST00000511421 ZFP82Q8N141 532 aa7.86□□□□□ -1.15
SH3RF1-205ENST00000511421 ATP6V0E2Q8NHE4 81 aa7.86□□□□□ -1.15
SH3RF1-205ENST00000511421 SSBP4Q9BWG4 385 aaPredicted RBP7.86□□□□□ -1.15
SH3RF1-205ENST00000511421 GTSF1LQ9H1H1 148 aa7.86□□□□□ -1.15
SH3RF1-205ENST00000511421 A0A087WWL8 130 aa7.86□□□□□ -1.15
SH3RF1-205ENST00000511421 IGHV3-38A0A0C4DH36 116 aa7.86□□□□□ -1.15
SH3RF1-205ENST00000511421 RAB19A4D1S5 217 aa7.86□□□□□ -1.15
SH3RF1-205ENST00000511421 GAGE12JA6NER3 117 aa7.86□□□□□ -1.15
SH3RF1-205ENST00000511421 SNAI2O43623 268 aa7.86□□□□□ -1.15
SH3RF1-205ENST00000511421 PDE6DO43924 150 aa7.86□□□□□ -1.15
SH3RF1-205ENST00000511421 IFNA1P01562 189 aa7.86□□□□□ -1.15
SH3RF1-205ENST00000511421 GAGE1Q13065 139 aa7.86□□□□□ -1.15
SH3RF1-205ENST00000511421 GAGE4Q13068 117 aa7.86□□□□□ -1.15
SH3RF1-205ENST00000511421 GAGE5Q13069 117 aa7.86□□□□□ -1.15
SH3RF1-205ENST00000511421 GAGE13Q4V321 117 aa7.86□□□□□ -1.15
SH3RF1-205ENST00000511421 LELP1Q5T871 98 aa7.86□□□□□ -1.15
SH3RF1-205ENST00000511421 DNAH5Q8TE73 4624 aa7.85□□□□□ -1.15
SH3RF1-205ENST00000511421 LINC01556Q5JQF7 62 aa7.85□□□□□ -1.15
SH3RF1-205ENST00000511421 FAM74A4Q5TZK3 123 aa7.85□□□□□ -1.15
SH3RF1-205ENST00000511421 OR10AG1Q8NH19 301 aa7.85□□□□□ -1.15
SH3RF1-205ENST00000511421 VAX2Q9UIW0 290 aa7.85□□□□□ -1.15
SH3RF1-205ENST00000511421 RYR1P21817 5038 aa7.85□□□□□ -1.15
SH3RF1-205ENST00000511421 TRBV20OR9-2A0A075B6H5 130 aa7.84□□□□□ -1.15
SH3RF1-205ENST00000511421 TRAV8-6A0A0B4J262 113 aa7.84□□□□□ -1.15
SH3RF1-205ENST00000511421 OR5AL1P0C617 328 aa7.84□□□□□ -1.15
SH3RF1-205ENST00000511421 NDUFA5Q16718 116 aa7.84□□□□□ -1.15
SH3RF1-205ENST00000511421 OR10J3Q5JRS4 329 aa7.84□□□□□ -1.15
SH3RF1-205ENST00000511421 ALKAL2Q6UX46 152 aa7.84□□□□□ -1.15
SH3RF1-205ENST00000511421 SPATA12Q7Z6I5 190 aa7.84□□□□□ -1.15
SH3RF1-205ENST00000511421 NFE4Q86UQ8 179 aa7.84□□□□□ -1.15
SH3RF1-205ENST00000511421 SMIM12Q96EX1 92 aa7.84□□□□□ -1.15
SH3RF1-205ENST00000511421 MED9Q9NWA0 146 aa7.84□□□□□ -1.15
SH3RF1-205ENST00000511421 MSRB1Q9NZV6 116 aa7.84□□□□□ -1.15
SH3RF1-205ENST00000511421 C19orf71A6NCJ1 209 aa7.83□□□□□ -1.16
SH3RF1-205ENST00000511421 C16orf90A8MZG2 172 aa7.83□□□□□ -1.16
SH3RF1-205ENST00000511421 TAGLN2P37802 199 aaKnown RBP7.83□□□□□ -1.16
SH3RF1-205ENST00000511421 GNG4P50150 75 aa7.83□□□□□ -1.16
SH3RF1-205ENST00000511421 KRTAP10-2P60368 255 aa7.83□□□□□ -1.16
SH3RF1-205ENST00000511421 C10orf126Q8N4M7 172 aa7.83□□□□□ -1.16
SH3RF1-205ENST00000511421 MUC21A0A0G2JKD1 596 aa7.83□□□□□ -1.16
SH3RF1-205ENST00000511421 MUC21A0A140T8X8 626 aa7.83□□□□□ -1.16
SH3RF1-205ENST00000511421 NKX2-5P52952 324 aaPredicted RBP7.83□□□□□ -1.16
SH3RF1-205ENST00000511421 LYPD6BQ8NI32 183 aa7.83□□□□□ -1.16
SH3RF1-205ENST00000511421 BOLA1Q9Y3E2 137 aa7.83□□□□□ -1.16
SH3RF1-205ENST00000511421 PRSS47A8MTI9 375 aa7.82□□□□□ -1.16
SH3RF1-205ENST00000511421 IBA57-AS1B1ANH7 110 aa7.82□□□□□ -1.16
SH3RF1-205ENST00000511421 IGLC6P0CF74 106 aa7.82□□□□□ -1.16
SH3RF1-205ENST00000511421 BLOC1S1P78537 153 aa7.82□□□□□ -1.16
SH3RF1-205ENST00000511421 HSPG2P98160 4391 aa7.81□□□□□ -1.16
SH3RF1-205ENST00000511421 TRBV10-1A0A0K0K1A3 114 aa7.81□□□□□ -1.16
SH3RF1-205ENST00000511421 GZMBP10144 247 aa7.81□□□□□ -1.16
SH3RF1-205ENST00000511421 SPANXN1Q5VSR9 72 aa7.81□□□□□ -1.16
SH3RF1-205ENST00000511421 OR2D3Q8NGH3 330 aa7.81□□□□□ -1.16
SH3RF1-205ENST00000511421 DAZAP1Q96EP5 407 aaKnown RBP7.81□□□□□ -1.16
SH3RF1-205ENST00000511421 IGHV3-30P01768 117 aa7.8□□□□□ -1.16
SH3RF1-205ENST00000511421 IGHV3-33P01772 117 aa7.8□□□□□ -1.16
SH3RF1-205ENST00000511421 IGHV3-30-3P0DP02 117 aa7.8□□□□□ -1.16
SH3RF1-205ENST00000511421 IGHV3-30-5P0DP03 117 aa7.8□□□□□ -1.16
SH3RF1-205ENST00000511421 RAB4BP61018 213 aa7.8□□□□□ -1.16
SH3RF1-205ENST00000511421 Q8N3U1 123 aa7.8□□□□□ -1.16
SH3RF1-205ENST00000511421 KIF25-AS1Q9Y6Z4 181 aa7.8□□□□□ -1.16
SH3RF1-205ENST00000511421 APOBP04114 4563 aaKnown RBP7.8□□□□□ -1.16
SH3RF1-205ENST00000511421 A0A087WTM6 91 aa7.79□□□□□ -1.16
SH3RF1-205ENST00000511421 A0A087WWC5 75 aa7.79□□□□□ -1.16
SH3RF1-205ENST00000511421 RBFOX3A6NFN3 312 aa7.79□□□□□ -1.16
SH3RF1-205ENST00000511421 ERVFC1-1P60608 527 aa7.79□□□□□ -1.16
SH3RF1-205ENST00000511421 RPS20P60866 119 aaKnown RBP7.79□□□□□ -1.16
SH3RF1-205ENST00000511421 UBE2D3P61077 147 aa7.79□□□□□ -1.16
SH3RF1-205ENST00000511421 SSTP61278 116 aa7.79□□□□□ -1.16
SH3RF1-205ENST00000511421 UBE2D2P62837 147 aa7.79□□□□□ -1.16
SH3RF1-205ENST00000511421 OR10G8Q8NGN5 311 aa7.79□□□□□ -1.16
SH3RF1-205ENST00000511421 TRBV7-3A0A075B6L6 115 aa7.79□□□□□ -1.16
SH3RF1-205ENST00000511421 P01737 135 aa7.79□□□□□ -1.16
SH3RF1-205ENST00000511421 RPL36AP83881 106 aaKnown RBP7.79□□□□□ -1.16
SH3RF1-205ENST00000511421 FER1L6-AS1Q8NA97 138 aa7.79□□□□□ -1.16
SH3RF1-205ENST00000511421 NEXN-AS1Q8NBZ9 246 aa7.79□□□□□ -1.16
SH3RF1-205ENST00000511421 NUDT10Q8NFP7 164 aa7.79□□□□□ -1.16
SH3RF1-205ENST00000511421 OCC1Q8TAD7 63 aa7.79□□□□□ -1.16
SH3RF1-205ENST00000511421 RPL36ALQ969Q0 106 aaKnown RBP7.79□□□□□ -1.16
SH3RF1-205ENST00000511421 NUDT11Q96G61 164 aa7.79□□□□□ -1.16
SH3RF1-205ENST00000511421 BIN3Q9NQY0 253 aa7.79□□□□□ -1.16
SH3RF1-205ENST00000511421 TMEM250H0YL14 139 aa7.78□□□□□ -1.16
SH3RF1-205ENST00000511421 K7EN84 100 aa7.78□□□□□ -1.16
SH3RF1-205ENST00000511421 ZNF56Q15929 161 aa7.78□□□□□ -1.16
SH3RF1-205ENST00000511421 TPPP3Q9BW30 176 aa7.78□□□□□ -1.16
SH3RF1-205ENST00000511421 XKRY2A2RUG3 117 aa7.77□□□□□ -1.17
SH3RF1-205ENST00000511421 EREGO14944 169 aa7.77□□□□□ -1.17
SH3RF1-205ENST00000511421 CDK2AP2O75956 126 aa7.77□□□□□ -1.17
SH3RF1-205ENST00000511421 FUSP35637 526 aaKnown RBP eCLIP7.77□□□□□ -1.17
SH3RF1-205ENST00000511421 LAGE3Q14657 143 aa7.77□□□□□ -1.17
SH3RF1-205ENST00000511421 AP1S3Q96PC3 154 aa7.77□□□□□ -1.17
SH3RF1-205ENST00000511421 PGPEP1Q9NXJ5 209 aa7.77□□□□□ -1.17
SH3RF1-205ENST00000511421 LRCOL1A6NCL2 159 aa7.76□□□□□ -1.17
SH3RF1-205ENST00000511421 CACNG7P62955 275 aa7.76□□□□□ -1.17
SH3RF1-205ENST00000511421 DAZ4Q86SG3 579 aaKnown RBP7.76□□□□□ -1.17
SH3RF1-205ENST00000511421 NIT1Q86X76 327 aa7.76□□□□□ -1.17
SH3RF1-205ENST00000511421 Q9HAA7 133 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms