RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 C10orf105Q8TEF2 133 aa5.51□□□□□ -1.53
LIMCH1-207ENST00000508466 SHISA9B4DS77 424 aa5.51□□□□□ -1.53
LIMCH1-207ENST00000508466 LHBP01229 141 aa5.51□□□□□ -1.53
LIMCH1-207ENST00000508466 FAM27E3Q08E93 113 aa5.51□□□□□ -1.53
LIMCH1-207ENST00000508466 ATXN8Q156A1 80 aa5.51□□□□□ -1.53
LIMCH1-207ENST00000508466 LYRM7Q5U5X0 104 aa5.51□□□□□ -1.53
LIMCH1-207ENST00000508466 GAGE2AQ6NT46 116 aa5.51□□□□□ -1.53
LIMCH1-207ENST00000508466 SDIM1Q6ZPB5 146 aa5.51□□□□□ -1.53
LIMCH1-207ENST00000508466 PIP4P1Q86T03 277 aa5.51□□□□□ -1.53
LIMCH1-207ENST00000508466 F5H768 121 aa5.51□□□□□ -1.53
LIMCH1-207ENST00000508466 LY6HO94772 140 aa5.51□□□□□ -1.53
LIMCH1-207ENST00000508466 NXPH4O95158 308 aa5.51□□□□□ -1.53
LIMCH1-207ENST00000508466 HOXD3P31249 432 aaPredicted RBP5.51□□□□□ -1.53
LIMCH1-207ENST00000508466 CCL11P51671 97 aa5.51□□□□□ -1.53
LIMCH1-207ENST00000508466 ADAMTSL4-AS1Q5T5F5 129 aa5.51□□□□□ -1.53
LIMCH1-207ENST00000508466 SLC25A29Q8N8R3 303 aa5.51□□□□□ -1.53
LIMCH1-207ENST00000508466 TMEM263Q8WUH6 116 aaKnown RBP5.51□□□□□ -1.53
LIMCH1-207ENST00000508466 DNAJC30Q96LL9 226 aa5.51□□□□□ -1.53
LIMCH1-207ENST00000508466 TMEM14CQ9P0S9 112 aa5.51□□□□□ -1.53
LIMCH1-207ENST00000508466 MSRB2Q9Y3D2 182 aa5.51□□□□□ -1.53
LIMCH1-207ENST00000508466 IGLV4-69A0A075B6H9 119 aa5.5□□□□□ -1.53
LIMCH1-207ENST00000508466 CLPSL1A2RUU4 121 aa5.5□□□□□ -1.53
LIMCH1-207ENST00000508466 PRB1P04280 392 aa5.5□□□□□ -1.53
LIMCH1-207ENST00000508466 RPL11P62913 178 aaKnown RBP5.5□□□□□ -1.53
LIMCH1-207ENST00000508466 TECTAO75443 2155 aa5.5□□□□□ -1.53
LIMCH1-207ENST00000508466 A0A0J9YXV3 536 aa5.5□□□□□ -1.53
LIMCH1-207ENST00000508466 TRAV25A0A0B4J276 109 aa5.49□□□□□ -1.53
LIMCH1-207ENST00000508466 C3orf22Q8N5N4 141 aa5.49□□□□□ -1.53
LIMCH1-207ENST00000508466 WNK1Q9H4A3 2382 aa5.49□□□□□ -1.53
LIMCH1-207ENST00000508466 IGHV7-4-1A0A0J9YVY3 117 aa5.49□□□□□ -1.53
LIMCH1-207ENST00000508466 TRBV10-2A0A0K0K1G8 114 aa5.49□□□□□ -1.53
LIMCH1-207ENST00000508466 IGKV3-20P01619 116 aa5.49□□□□□ -1.53
LIMCH1-207ENST00000508466 HTN1P15515 57 aa5.49□□□□□ -1.53
LIMCH1-207ENST00000508466 ATP5IP56385 69 aaPredicted RBP5.49□□□□□ -1.53
LIMCH1-207ENST00000508466 IGF2-ASQ6U949 168 aa5.49□□□□□ -1.53
LIMCH1-207ENST00000508466 TOMM6Q96B49 74 aa5.49□□□□□ -1.53
LIMCH1-207ENST00000508466 CSPG4Q6UVK1 2322 aa5.49□□□□□ -1.53
LIMCH1-207ENST00000508466 IGHV3-73A0A0B4J1V6 119 aa5.49□□□□□ -1.53
LIMCH1-207ENST00000508466 C9orf47Q6ZRZ4 202 aa5.49□□□□□ -1.53
LIMCH1-207ENST00000508466 Q6ZS92 163 aa5.49□□□□□ -1.53
LIMCH1-207ENST00000508466 WFDC9Q8NEX5 89 aa5.49□□□□□ -1.53
LIMCH1-207ENST00000508466 TMEM126AQ9H061 195 aa5.49□□□□□ -1.53
LIMCH1-207ENST00000508466 PHLDA3Q9Y5J5 127 aa5.49□□□□□ -1.53
LIMCH1-207ENST00000508466 ATRXP46100 2492 aa5.48□□□□□ -1.53
LIMCH1-207ENST00000508466 RNASE4P34096 147 aaKnown RBP5.48□□□□□ -1.53
LIMCH1-207ENST00000508466 MFAP4P55083 255 aa5.48□□□□□ -1.53
LIMCH1-207ENST00000508466 PRR30Q53SZ7 412 aaPredicted RBP5.48□□□□□ -1.53
LIMCH1-207ENST00000508466 Q9HAA7 133 aa5.48□□□□□ -1.53
LIMCH1-207ENST00000508466 IGHV1-3A0A0C4DH29 117 aa5.48□□□□□ -1.53
LIMCH1-207ENST00000508466 METTL26Q96S19 204 aa5.48□□□□□ -1.53
LIMCH1-207ENST00000508466 TLN1Q9Y490 2541 aaKnown RBP5.48□□□□□ -1.53
LIMCH1-207ENST00000508466 MUC4Q99102 2169 aa5.48□□□□□ -1.53
LIMCH1-207ENST00000508466 CEP295Q9C0D2 2601 aa5.47□□□□□ -1.53
LIMCH1-207ENST00000508466 A0A1W2PNU3 283 aaPredicted RBP5.47□□□□□ -1.53
LIMCH1-207ENST00000508466 I3L3M4 83 aa5.47□□□□□ -1.53
LIMCH1-207ENST00000508466 J3KT08 172 aa5.47□□□□□ -1.53
LIMCH1-207ENST00000508466 NDUFB3O43676 98 aa5.47□□□□□ -1.53
LIMCH1-207ENST00000508466 POM121L12Q8N7R1 296 aa5.47□□□□□ -1.53
LIMCH1-207ENST00000508466 C1orf43Q9BWL3 253 aa5.47□□□□□ -1.53
LIMCH1-207ENST00000508466 A0A0U1RQV1 116 aa5.47□□□□□ -1.53
LIMCH1-207ENST00000508466 M0R2P5 195 aa5.47□□□□□ -1.53
LIMCH1-207ENST00000508466 ICOSQ9Y6W8 199 aa5.47□□□□□ -1.53
LIMCH1-207ENST00000508466 MBD3L4A6NDZ8 208 aaPredicted RBP5.46□□□□□ -1.53
LIMCH1-207ENST00000508466 MBD3L3A6NE82 208 aaPredicted RBP5.46□□□□□ -1.53
LIMCH1-207ENST00000508466 MBD3L5A6NJ08 208 aaPredicted RBP5.46□□□□□ -1.53
LIMCH1-207ENST00000508466 M0R1W7 72 aa5.46□□□□□ -1.53
LIMCH1-207ENST00000508466 THBDP07204 575 aa5.46□□□□□ -1.53
LIMCH1-207ENST00000508466 IGHV1-8P0DP01 117 aa5.46□□□□□ -1.53
LIMCH1-207ENST00000508466 GATA4P43694 442 aa5.46□□□□□ -1.53
LIMCH1-207ENST00000508466 ORMDL2Q53FV1 153 aa5.46□□□□□ -1.53
LIMCH1-207ENST00000508466 FAM19A4Q96LR4 140 aa5.46□□□□□ -1.53
LIMCH1-207ENST00000508466 AMELXQ99217 191 aa5.46□□□□□ -1.53
LIMCH1-207ENST00000508466 KLK9Q9UKQ9 250 aa5.46□□□□□ -1.53
LIMCH1-207ENST00000508466 TRAV12-1A0A0B4J245 112 aa5.46□□□□□ -1.54
LIMCH1-207ENST00000508466 EDN2P20800 178 aa5.46□□□□□ -1.54
LIMCH1-207ENST00000508466 ECSCRQ19T08 205 aa5.46□□□□□ -1.54
LIMCH1-207ENST00000508466 BDP1A6H8Y1 2624 aa5.46□□□□□ -1.54
LIMCH1-207ENST00000508466 TTC28Q96AY4 2481 aa5.46□□□□□ -1.54
LIMCH1-207ENST00000508466 IGLV3-9A0A075B6K5 115 aa5.46□□□□□ -1.54
LIMCH1-207ENST00000508466 PRM2P04554 102 aa5.46□□□□□ -1.54
LIMCH1-207ENST00000508466 A0A1B0GX51 115 aa5.45□□□□□ -1.54
LIMCH1-207ENST00000508466 F8W735 103 aaPredicted RBP5.45□□□□□ -1.54
LIMCH1-207ENST00000508466 CTSGP08311 255 aa5.45□□□□□ -1.54
LIMCH1-207ENST00000508466 RPL13AP40429 203 aaKnown RBP5.45□□□□□ -1.54
LIMCH1-207ENST00000508466 CLEC19AQ6UXS0 136 aa5.45□□□□□ -1.54
LIMCH1-207ENST00000508466 FANCD2OSQ96PS1 177 aa5.45□□□□□ -1.54
LIMCH1-207ENST00000508466 SLC25A15Q9Y619 301 aa5.45□□□□□ -1.54
LIMCH1-207ENST00000508466 TRAV17A0A0B4J275 112 aa5.45□□□□□ -1.54
LIMCH1-207ENST00000508466 RNF223E7ERA6 249 aa5.45□□□□□ -1.54
LIMCH1-207ENST00000508466 BUB1B-PAK6H3BSN5 160 aa5.45□□□□□ -1.54
LIMCH1-207ENST00000508466 EBI3Q14213 229 aa5.45□□□□□ -1.54
LIMCH1-207ENST00000508466 Q6Q795 121 aa5.45□□□□□ -1.54
LIMCH1-207ENST00000508466 LYPD1Q8N2G4 141 aa5.45□□□□□ -1.54
LIMCH1-207ENST00000508466 WFDC11Q8NEX6 87 aa5.45□□□□□ -1.54
LIMCH1-207ENST00000508466 ZNF576Q9H609 170 aa5.45□□□□□ -1.54
LIMCH1-207ENST00000508466 BSNQ9UPA5 3926 aa5.45□□□□□ -1.54
LIMCH1-207ENST00000508466 TMEM223A0PJW6 202 aa5.44□□□□□ -1.54
LIMCH1-207ENST00000508466 LINC01559Q495D7 138 aa5.44□□□□□ -1.54
LIMCH1-207ENST00000508466 C9orf129Q5T035 196 aaKnown RBP5.44□□□□□ -1.54
LIMCH1-207ENST00000508466 Q9UF83 564 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms