RNA–Protein interactions for RNA: ENST00000505795.1

HMGN1P13-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 13, humanhuman

BASIC

Gene HMGN1P13, Length 138 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P13-201ENST00000505795 S100PP25815 95 aa0.54□□□□□ -2.32
HMGN1P13-201ENST00000505795 EFNA4P52798 201 aa0.54□□□□□ -2.32
HMGN1P13-201ENST00000505795 FXYD3Q14802 87 aa0.54□□□□□ -2.32
HMGN1P13-201ENST00000505795 WHAMMP3Q1A5X7 153 aa0.54□□□□□ -2.32
HMGN1P13-201ENST00000505795 XAF1Q6GPH4 301 aa0.54□□□□□ -2.32
HMGN1P13-201ENST00000505795 LINC00575Q6W349 94 aa0.54□□□□□ -2.32
HMGN1P13-201ENST00000505795 C5orf56Q8N8D9 126 aa0.54□□□□□ -2.32
HMGN1P13-201ENST00000505795 TMEM141Q96I45 108 aa0.54□□□□□ -2.32
HMGN1P13-201ENST00000505795 PSMG3Q9BT73 122 aaPredicted RBP0.54□□□□□ -2.32
HMGN1P13-201ENST00000505795 PDCD10Q9BUL8 212 aa0.54□□□□□ -2.32
HMGN1P13-201ENST00000505795 WFDC10AQ9H1F0 79 aa0.54□□□□□ -2.32
HMGN1P13-201ENST00000505795 NAA60Q9H7X0 242 aa0.54□□□□□ -2.32
HMGN1P13-201ENST00000505795 RPRMQ9NS64 109 aa0.54□□□□□ -2.32
HMGN1P13-201ENST00000505795 IER3IP1Q9Y5U9 82 aa0.54□□□□□ -2.32
HMGN1P13-201ENST00000505795 SPHKAPQ2M3C7 1700 aa0.54□□□□□ -2.32
HMGN1P13-201ENST00000505795 SIPA1L3O60292 1781 aaPredicted RBP0.54□□□□□ -2.32
HMGN1P13-201ENST00000505795 DLG5Q8TDM6 1919 aa0.54□□□□□ -2.32
HMGN1P13-201ENST00000505795 HELZ2Q9BYK8 2649 aaKnown RBP0.53□□□□□ -2.32
HMGN1P13-201ENST00000505795 PRRC2BQ5JSZ5 2229 aaKnown RBP0.53□□□□□ -2.32
HMGN1P13-201ENST00000505795 NRXN2Q9P2S2 1712 aa0.53□□□□□ -2.32
HMGN1P13-201ENST00000505795 CNTRLQ7Z7A1 2325 aa0.53□□□□□ -2.32
HMGN1P13-201ENST00000505795 A0A087WTM6 91 aa0.53□□□□□ -2.32
HMGN1P13-201ENST00000505795 LOC101927531A0A1B0GV80 90 aa0.53□□□□□ -2.32
HMGN1P13-201ENST00000505795 IGKV2-29A2NJV5 120 aaPredicted RBP0.53□□□□□ -2.32
HMGN1P13-201ENST00000505795 HIGD1CA8MV81 97 aa0.53□□□□□ -2.32
HMGN1P13-201ENST00000505795 MCRIP1C9JLW8 97 aa0.53□□□□□ -2.32
HMGN1P13-201ENST00000505795 F6UZH7 168 aa0.53□□□□□ -2.32
HMGN1P13-201ENST00000505795 K7EIL1 84 aa0.53□□□□□ -2.32
HMGN1P13-201ENST00000505795 NDUFB6O95139 128 aa0.53□□□□□ -2.32
HMGN1P13-201ENST00000505795 AKAIN1P0CW23 69 aa0.53□□□□□ -2.32
HMGN1P13-201ENST00000505795 IL7P13232 177 aa0.53□□□□□ -2.32
HMGN1P13-201ENST00000505795 HIST1H1DP16402 221 aaKnown RBP0.53□□□□□ -2.32
HMGN1P13-201ENST00000505795 S100A1P23297 94 aa0.53□□□□□ -2.32
HMGN1P13-201ENST00000505795 GNG4P50150 75 aa0.53□□□□□ -2.32
HMGN1P13-201ENST00000505795 FXYD4P59646 89 aa0.53□□□□□ -2.32
HMGN1P13-201ENST00000505795 NPC2P61916 151 aa0.53□□□□□ -2.32
HMGN1P13-201ENST00000505795 C9orf116Q5BN46 136 aaPredicted RBP0.53□□□□□ -2.32
HMGN1P13-201ENST00000505795 C12orf73Q69YU5 71 aa0.53□□□□□ -2.32
HMGN1P13-201ENST00000505795 UNQ5815/PRO19632Q6UWF5 114 aa0.53□□□□□ -2.32
HMGN1P13-201ENST00000505795 Q6ZSA8 131 aa0.53□□□□□ -2.32
HMGN1P13-201ENST00000505795 COPS9Q8WXC6 57 aa0.53□□□□□ -2.32
HMGN1P13-201ENST00000505795 SPTSSAQ969W0 71 aa0.53□□□□□ -2.32
HMGN1P13-201ENST00000505795 IFI27L1Q96BM0 104 aa0.53□□□□□ -2.32
HMGN1P13-201ENST00000505795 C14orf144Q96I85 54 aa0.53□□□□□ -2.32
HMGN1P13-201ENST00000505795 SEC11CQ9BY50 192 aa0.53□□□□□ -2.32
HMGN1P13-201ENST00000505795 TMEM242Q9NWH2 141 aa0.53□□□□□ -2.32
HMGN1P13-201ENST00000505795 MYH9P35579 1960 aaKnown RBP0.53□□□□□ -2.32
HMGN1P13-201ENST00000505795 ZGRF1Q86YA3 2104 aa0.53□□□□□ -2.32
HMGN1P13-201ENST00000505795 KIAA0100Q14667 2235 aaKnown RBP0.53□□□□□ -2.33
HMGN1P13-201ENST00000505795 LRRC37A3O60309 1634 aa0.53□□□□□ -2.33
HMGN1P13-201ENST00000505795 PHIPQ8WWQ0 1821 aa0.52□□□□□ -2.33
HMGN1P13-201ENST00000505795 CHD3Q12873 2000 aaKnown RBP0.52□□□□□ -2.33
HMGN1P13-201ENST00000505795 TRAV17A0A0B4J275 112 aa0.52□□□□□ -2.33
HMGN1P13-201ENST00000505795 ANGP03950 147 aaKnown RBP0.52□□□□□ -2.33
HMGN1P13-201ENST00000505795 IL5P05113 134 aa0.52□□□□□ -2.33
HMGN1P13-201ENST00000505795 CCKP06307 115 aa0.52□□□□□ -2.33
HMGN1P13-201ENST00000505795 UBE2D1P51668 147 aa0.52□□□□□ -2.33
HMGN1P13-201ENST00000505795 Q56UQ5 140 aa0.52□□□□□ -2.33
HMGN1P13-201ENST00000505795 TSKUQ8WUA8 353 aa0.52□□□□□ -2.33
HMGN1P13-201ENST00000505795 C12orf57Q99622 126 aa0.52□□□□□ -2.33
HMGN1P13-201ENST00000505795 COA4Q9NYJ1 87 aa0.52□□□□□ -2.33
HMGN1P13-201ENST00000505795 CASKIN1Q8WXD9 1431 aa0.52□□□□□ -2.33
HMGN1P13-201ENST00000505795 NWD2Q9ULI1 1742 aa0.52□□□□□ -2.33
HMGN1P13-201ENST00000505795 AFDNP55196 1824 aaKnown RBP0.52□□□□□ -2.33
HMGN1P13-201ENST00000505795 NINQ8N4C6 2090 aa0.52□□□□□ -2.33
HMGN1P13-201ENST00000505795 TRAV23DV6A0A075B6W5 121 aa0.51□□□□□ -2.33
HMGN1P13-201ENST00000505795 A0A096LNT2 108 aa0.51□□□□□ -2.33
HMGN1P13-201ENST00000505795 TRAV12-3A0A0B4J271 114 aa0.51□□□□□ -2.33
HMGN1P13-201ENST00000505795 TRBV10-3A0A0K0K1G6 114 aa0.51□□□□□ -2.33
HMGN1P13-201ENST00000505795 ATP6V1G2-DDX39BF2Z307 99 aa0.51□□□□□ -2.33
HMGN1P13-201ENST00000505795 SMIM6P0DI80 62 aa0.51□□□□□ -2.33
HMGN1P13-201ENST00000505795 PIPP12273 146 aaPredicted RBP0.51□□□□□ -2.33
HMGN1P13-201ENST00000505795 CCL3L1P16619 93 aa0.51□□□□□ -2.33
HMGN1P13-201ENST00000505795 CBLN1P23435 193 aa0.51□□□□□ -2.33
HMGN1P13-201ENST00000505795 ABCA4P78363 2273 aa0.51□□□□□ -2.33
HMGN1P13-201ENST00000505795 CCL8P80075 99 aa0.51□□□□□ -2.33
HMGN1P13-201ENST00000505795 MRPS10P82664 201 aaKnown RBP0.51□□□□□ -2.33
HMGN1P13-201ENST00000505795 CPSF1Q10570 1443 aaKnown RBP0.51□□□□□ -2.33
HMGN1P13-201ENST00000505795 KLKP1Q107X0 134 aa0.51□□□□□ -2.33
HMGN1P13-201ENST00000505795 SPAG17Q6Q759 2223 aa0.51□□□□□ -2.33
HMGN1P13-201ENST00000505795 ZNF818PQ6ZRF7 136 aa0.51□□□□□ -2.33
HMGN1P13-201ENST00000505795 KTN1Q86UP2 1357 aaKnown RBP0.51□□□□□ -2.33
HMGN1P13-201ENST00000505795 TOPAZ1Q8N9V7 1692 aa0.51□□□□□ -2.33
HMGN1P13-201ENST00000505795 PATJQ8NI35 1801 aa0.51□□□□□ -2.33
HMGN1P13-201ENST00000505795 C10orf82Q8WW14 230 aa0.51□□□□□ -2.33
HMGN1P13-201ENST00000505795 CCL19Q99731 98 aa0.51□□□□□ -2.33
HMGN1P13-201ENST00000505795 GNG8Q9UK08 70 aa0.51□□□□□ -2.33
HMGN1P13-201ENST00000505795 ROS1P08922 2347 aa0.5□□□□□ -2.33
HMGN1P13-201ENST00000505795 CITO14578 2027 aa0.5□□□□□ -2.33
HMGN1P13-201ENST00000505795 TET3O43151 1660 aa0.5□□□□□ -2.33
HMGN1P13-201ENST00000505795 TROQ12816 1431 aaPredicted RBP0.5□□□□□ -2.33
HMGN1P13-201ENST00000505795 C10orf71Q711Q0 1435 aa0.5□□□□□ -2.33
HMGN1P13-201ENST00000505795 CCNB3Q8WWL7 1395 aa0.5□□□□□ -2.33
HMGN1P13-201ENST00000505795 OOSP1A8MZH6 123 aa0.5□□□□□ -2.33
HMGN1P13-201ENST00000505795 NCR3O14931 201 aa0.5□□□□□ -2.33
HMGN1P13-201ENST00000505795 TFF1P04155 84 aa0.5□□□□□ -2.33
HMGN1P13-201ENST00000505795 CAV3P56539 151 aa0.5□□□□□ -2.33
HMGN1P13-201ENST00000505795 TPPP2P59282 170 aa0.5□□□□□ -2.33
HMGN1P13-201ENST00000505795 UBE2G1P62253 170 aa0.5□□□□□ -2.33
HMGN1P13-201ENST00000505795 INSL4Q14641 139 aa0.5□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms