RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 C18orf65Q6ZTR6 163 aa10.7□□□□□ -0.7
TCOF1-207ENST00000504761 IGLL1P15814 213 aa10.7□□□□□ -0.7
TCOF1-207ENST00000504761 PLNP26678 52 aa10.7□□□□□ -0.7
TCOF1-207ENST00000504761 MLST8Q9BVC4 326 aa10.7□□□□□ -0.7
TCOF1-207ENST00000504761 MDFICQ9P1T7 246 aa10.7□□□□□ -0.7
TCOF1-207ENST00000504761 I3L3M4 83 aa10.7□□□□□ -0.7
TCOF1-207ENST00000504761 M0R2P5 195 aa10.7□□□□□ -0.7
TCOF1-207ENST00000504761 ZNF625Q96I27 306 aaPredicted RBP10.7□□□□□ -0.7
TCOF1-207ENST00000504761 RNASE1P07998 156 aaKnown RBP10.69□□□□□ -0.7
TCOF1-207ENST00000504761 ZNF124Q15973 351 aa10.69□□□□□ -0.7
TCOF1-207ENST00000504761 C20orf173Q96LM9 149 aa10.69□□□□□ -0.7
TCOF1-207ENST00000504761 A0A0J9YX75 114 aa10.69□□□□□ -0.7
TCOF1-207ENST00000504761 DKK2Q9UBU2 259 aa10.69□□□□□ -0.7
TCOF1-207ENST00000504761 LINC01549A6NIU2 74 aa10.68□□□□□ -0.7
TCOF1-207ENST00000504761 CD5LO43866 347 aa10.68□□□□□ -0.7
TCOF1-207ENST00000504761 CFAP161Q6P656 301 aa10.68□□□□□ -0.7
TCOF1-207ENST00000504761 MRAPQ8TCY5 172 aa10.68□□□□□ -0.7
TCOF1-207ENST00000504761 ORAOV1Q8WV07 137 aa10.68□□□□□ -0.7
TCOF1-207ENST00000504761 COA6Q5JTJ3 125 aaKnown RBP10.68□□□□□ -0.7
TCOF1-207ENST00000504761 TMEM86BQ8N661 226 aa10.68□□□□□ -0.7
TCOF1-207ENST00000504761 DPH3Q96FX2 82 aa10.68□□□□□ -0.7
TCOF1-207ENST00000504761 ESM1Q9NQ30 184 aa10.68□□□□□ -0.7
TCOF1-207ENST00000504761 TDRG1Q3Y452 100 aa10.67□□□□□ -0.7
TCOF1-207ENST00000504761 CHAC1Q9BUX1 264 aa10.67□□□□□ -0.7
TCOF1-207ENST00000504761 A0A0J9YY99 117 aa10.67□□□□□ -0.7
TCOF1-207ENST00000504761 LY6G6DO95868 133 aa10.67□□□□□ -0.7
TCOF1-207ENST00000504761 PSMB8P28062 276 aa10.67□□□□□ -0.7
TCOF1-207ENST00000504761 ZNF747Q9BV97 191 aa10.67□□□□□ -0.7
TCOF1-207ENST00000504761 ZNF702PQ9H963 129 aa10.67□□□□□ -0.7
TCOF1-207ENST00000504761 DEFB4AO15263 64 aa10.67□□□□□ -0.7
TCOF1-207ENST00000504761 CRPP02741 224 aa10.67□□□□□ -0.7
TCOF1-207ENST00000504761 VWC2LB2RUY7 222 aa10.66□□□□□ -0.7
TCOF1-207ENST00000504761 GAGE6Q13070 117 aa10.66□□□□□ -0.7
TCOF1-207ENST00000504761 GDF5OSQ5U4N7 250 aa10.66□□□□□ -0.7
TCOF1-207ENST00000504761 CRIP1P50238 77 aa10.66□□□□□ -0.7
TCOF1-207ENST00000504761 TNRC18O15417 2968 aaPredicted RBP10.66□□□□□ -0.7
TCOF1-207ENST00000504761 EREGO14944 169 aa10.66□□□□□ -0.7
TCOF1-207ENST00000504761 HLA-DRB4P13762 266 aa10.66□□□□□ -0.7
TCOF1-207ENST00000504761 APOC4P55056 127 aa10.66□□□□□ -0.7
TCOF1-207ENST00000504761 KLF5Q13887 457 aaPredicted RBP10.66□□□□□ -0.7
TCOF1-207ENST00000504761 BOD1L1Q8NFC6 3051 aa10.66□□□□□ -0.7
TCOF1-207ENST00000504761 SPCS1Q9Y6A9 102 aa10.66□□□□□ -0.7
TCOF1-207ENST00000504761 HLA-DRB4X5D2U9 266 aa10.66□□□□□ -0.7
TCOF1-207ENST00000504761 SUMO4Q6EEV6 95 aa10.65□□□□□ -0.7
TCOF1-207ENST00000504761 TET2Q6N021 2002 aaPredicted RBP10.65□□□□□ -0.7
TCOF1-207ENST00000504761 IGLC3P0DOY3 106 aa10.65□□□□□ -0.7
TCOF1-207ENST00000504761 PAX2Q02962 417 aa10.65□□□□□ -0.7
TCOF1-207ENST00000504761 HSD52Q0P140 79 aa10.65□□□□□ -0.7
TCOF1-207ENST00000504761 TP53TG3Q9ULZ0 132 aa10.65□□□□□ -0.7
TCOF1-207ENST00000504761 MYCNOSP40205 109 aa10.65□□□□□ -0.7
TCOF1-207ENST00000504761 C20orf78Q9BR46 151 aa10.65□□□□□ -0.7
TCOF1-207ENST00000504761 EDN2P20800 178 aa10.64□□□□□ -0.71
TCOF1-207ENST00000504761 LINC00158P58513 81 aa10.64□□□□□ -0.71
TCOF1-207ENST00000504761 PIFOQ8TCI5 191 aa10.64□□□□□ -0.71
TCOF1-207ENST00000504761 PMVKQ15126 192 aa10.64□□□□□ -0.71
TCOF1-207ENST00000504761 MAP6D1Q9H9H5 199 aa10.64□□□□□ -0.71
TCOF1-207ENST00000504761 HELZ2Q9BYK8 2649 aaKnown RBP10.64□□□□□ -0.71
TCOF1-207ENST00000504761 K7EQG2 157 aa10.64□□□□□ -0.71
TCOF1-207ENST00000504761 C9orf66Q5T8R8 295 aa10.64□□□□□ -0.71
TCOF1-207ENST00000504761 C20orf144Q9BQM9 153 aa10.64□□□□□ -0.71
TCOF1-207ENST00000504761 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.64□□□□□ -0.71
TCOF1-207ENST00000504761 IGKV2-29A2NJV5 120 aaPredicted RBP10.64□□□□□ -0.71
TCOF1-207ENST00000504761 LINC01006Q8NI28 216 aa10.64□□□□□ -0.71
TCOF1-207ENST00000504761 CTRLP40313 264 aa10.63□□□□□ -0.71
TCOF1-207ENST00000504761 TIMM21Q9BVV7 248 aa10.63□□□□□ -0.71
TCOF1-207ENST00000504761 TRAV8-2A0A0B4J237 113 aa10.63□□□□□ -0.71
TCOF1-207ENST00000504761 ESDP10768 282 aa10.63□□□□□ -0.71
TCOF1-207ENST00000504761 DEFB125Q8N687 156 aa10.63□□□□□ -0.71
TCOF1-207ENST00000504761 TRBV25-1A0A075B6N4 114 aa10.63□□□□□ -0.71
TCOF1-207ENST00000504761 DEFB135Q30KP9 77 aa10.62□□□□□ -0.71
TCOF1-207ENST00000504761 K7ERU9 68 aa10.62□□□□□ -0.71
TCOF1-207ENST00000504761 DEFB114Q30KQ6 69 aa10.62□□□□□ -0.71
TCOF1-207ENST00000504761 C6orf226Q5I0X4 101 aa10.62□□□□□ -0.71
TCOF1-207ENST00000504761 CLPSL2Q6UWE3 100 aa10.62□□□□□ -0.71
TCOF1-207ENST00000504761 PSMG3-AS1Q96PY0 264 aa10.62□□□□□ -0.71
TCOF1-207ENST00000504761 TRBV6-1A0A0K0K1D8 114 aa10.62□□□□□ -0.71
TCOF1-207ENST00000504761 CIDEAO60543 219 aa10.62□□□□□ -0.71
TCOF1-207ENST00000504761 IGLV2-11P01706 119 aa10.62□□□□□ -0.71
TCOF1-207ENST00000504761 ZNF493Q6ZR52 646 aa10.62□□□□□ -0.71
TCOF1-207ENST00000504761 TRBV7-9A0A0J9YWB2 115 aa10.62□□□□□ -0.71
TCOF1-207ENST00000504761 COPS9Q8WXC6 57 aa10.62□□□□□ -0.71
TCOF1-207ENST00000504761 MBD6Q96DN6 1003 aa10.62□□□□□ -0.71
TCOF1-207ENST00000504761 PRSS29PA6NIE9 313 aa10.61□□□□□ -0.71
TCOF1-207ENST00000504761 F8VRH5 84 aa10.61□□□□□ -0.71
TCOF1-207ENST00000504761 LGALS9BQ3B8N2 356 aa10.61□□□□□ -0.71
TCOF1-207ENST00000504761 LGALS9CQ6DKI2 356 aa10.61□□□□□ -0.71
TCOF1-207ENST00000504761 PRIMA1Q86XR5 153 aa10.61□□□□□ -0.71
TCOF1-207ENST00000504761 TMEM243Q9BU79 118 aa10.61□□□□□ -0.71
TCOF1-207ENST00000504761 IGLV1-40P01703 118 aa10.61□□□□□ -0.71
TCOF1-207ENST00000504761 MRGPRG-AS1Q2M3A8 158 aa10.61□□□□□ -0.71
TCOF1-207ENST00000504761 PLEKHB2Q96CS7 222 aa10.61□□□□□ -0.71
TCOF1-207ENST00000504761 A0A1B0GXF2 115 aa10.6□□□□□ -0.71
TCOF1-207ENST00000504761 PAX4O43316 350 aa10.6□□□□□ -0.71
TCOF1-207ENST00000504761 CKS1BP61024 79 aa10.6□□□□□ -0.71
TCOF1-207ENST00000504761 RPL39P62891 51 aaKnown RBP10.6□□□□□ -0.71
TCOF1-207ENST00000504761 SNHG12Q9BXW3 62 aa10.6□□□□□ -0.71
TCOF1-207ENST00000504761 F8W735 103 aaPredicted RBP10.6□□□□□ -0.71
TCOF1-207ENST00000504761 SEC11AP67812 179 aa10.6□□□□□ -0.71
TCOF1-207ENST00000504761 Q6ZQT7 251 aa10.6□□□□□ -0.71
TCOF1-207ENST00000504761 CRLF1O75462 422 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms