RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 ABCC10Q5T3U5 1492 aa0.99□□□□□ -2.25
HMGB1P35-201ENST00000503360 IFT140Q96RY7 1462 aa0.99□□□□□ -2.25
HMGB1P35-201ENST00000503360 PLXNA2O75051 1894 aa0.99□□□□□ -2.25
HMGB1P35-201ENST00000503360 ALPK2Q86TB3 2170 aa0.99□□□□□ -2.25
HMGB1P35-201ENST00000503360 DOCK10Q96BY6 2186 aa0.99□□□□□ -2.25
HMGB1P35-201ENST00000503360 SPHKAPQ2M3C7 1700 aa0.99□□□□□ -2.25
HMGB1P35-201ENST00000503360 TRBV10-3A0A0K0K1G6 114 aa0.99□□□□□ -2.25
HMGB1P35-201ENST00000503360 HIGD1CA8MV81 97 aa0.99□□□□□ -2.25
HMGB1P35-201ENST00000503360 DNAL4O96015 105 aa0.99□□□□□ -2.25
HMGB1P35-201ENST00000503360 CCL8P80075 99 aa0.99□□□□□ -2.25
HMGB1P35-201ENST00000503360 RBM3P98179 157 aaKnown RBP0.99□□□□□ -2.25
HMGB1P35-201ENST00000503360 S100A7L2Q5SY68 101 aa0.99□□□□□ -2.25
HMGB1P35-201ENST00000503360 SBSPONQ8IVN8 264 aa0.99□□□□□ -2.25
HMGB1P35-201ENST00000503360 C15orf53Q8NAA6 179 aa0.99□□□□□ -2.25
HMGB1P35-201ENST00000503360 IFI27L1Q96BM0 104 aa0.99□□□□□ -2.25
HMGB1P35-201ENST00000503360 ODF3Q96PU9 254 aa0.99□□□□□ -2.25
HMGB1P35-201ENST00000503360 SNHG12Q9BXW3 62 aa0.99□□□□□ -2.25
HMGB1P35-201ENST00000503360 DPY30Q9C005 99 aa0.99□□□□□ -2.25
HMGB1P35-201ENST00000503360 CYSTM1Q9H1C7 97 aa0.99□□□□□ -2.25
HMGB1P35-201ENST00000503360 WFDC10AQ9H1F0 79 aa0.99□□□□□ -2.25
HMGB1P35-201ENST00000503360 Q9H521 79 aa0.99□□□□□ -2.25
HMGB1P35-201ENST00000503360 MRPL35Q9NZE8 188 aaKnown RBP0.99□□□□□ -2.25
HMGB1P35-201ENST00000503360 MUC6Q6W4X9 2439 aa0.99□□□□□ -2.25
HMGB1P35-201ENST00000503360 MCM3APO60318 1980 aa0.99□□□□□ -2.25
HMGB1P35-201ENST00000503360 BAHCC1Q9P281 2608 aa0.99□□□□□ -2.25
HMGB1P35-201ENST00000503360 PTPRMP28827 1452 aa0.99□□□□□ -2.25
HMGB1P35-201ENST00000503360 NSD3Q9BZ95 1437 aa0.98□□□□□ -2.25
HMGB1P35-201ENST00000503360 LAMB1P07942 1786 aa0.98□□□□□ -2.25
HMGB1P35-201ENST00000503360 CASZ1Q86V15 1759 aa0.98□□□□□ -2.25
HMGB1P35-201ENST00000503360 HEATR1Q9H583 2144 aaKnown RBP0.98□□□□□ -2.25
HMGB1P35-201ENST00000503360 EML5Q05BV3 1969 aa0.98□□□□□ -2.25
HMGB1P35-201ENST00000503360 LRP5O75197 1615 aa0.98□□□□□ -2.25
HMGB1P35-201ENST00000503360 PTPRFP10586 1907 aa0.98□□□□□ -2.25
HMGB1P35-201ENST00000503360 IGKV3-7A0A075B6H7 116 aa0.98□□□□□ -2.25
HMGB1P35-201ENST00000503360 TRAV23DV6A0A075B6W5 121 aa0.98□□□□□ -2.25
HMGB1P35-201ENST00000503360 TEX49A0A1B0GTD5 131 aa0.98□□□□□ -2.25
HMGB1P35-201ENST00000503360 MPC2O95563 127 aa0.98□□□□□ -2.25
HMGB1P35-201ENST00000503360 IGLV3-1P01715 115 aa0.98□□□□□ -2.25
HMGB1P35-201ENST00000503360 PRB4P10163 310 aaPredicted RBP0.98□□□□□ -2.25
HMGB1P35-201ENST00000503360 INSL4Q14641 139 aa0.98□□□□□ -2.25
HMGB1P35-201ENST00000503360 KRTAP13-4Q3LI77 160 aa0.98□□□□□ -2.25
HMGB1P35-201ENST00000503360 GDF5OSQ5U4N7 250 aa0.98□□□□□ -2.25
HMGB1P35-201ENST00000503360 ZNF818PQ6ZRF7 136 aa0.98□□□□□ -2.25
HMGB1P35-201ENST00000503360 COMMD6Q7Z4G1 85 aa0.98□□□□□ -2.25
HMGB1P35-201ENST00000503360 SPTSSBQ8NFR3 76 aa0.98□□□□□ -2.25
HMGB1P35-201ENST00000503360 DSCR8Q96T75 97 aa0.98□□□□□ -2.25
HMGB1P35-201ENST00000503360 LIMD2Q9BT23 127 aa0.98□□□□□ -2.25
HMGB1P35-201ENST00000503360 CYP4F30PQ9H0H9 118 aa0.98□□□□□ -2.25
HMGB1P35-201ENST00000503360 V9GYS6 101 aa0.98□□□□□ -2.25
HMGB1P35-201ENST00000503360 ADGRB2O60241 1585 aa0.98□□□□□ -2.25
HMGB1P35-201ENST00000503360 ADGRL2O95490 1459 aa0.98□□□□□ -2.25
HMGB1P35-201ENST00000503360 ROBO1Q9Y6N7 1651 aa0.97□□□□□ -2.25
HMGB1P35-201ENST00000503360 NINQ8N4C6 2090 aa0.97□□□□□ -2.25
HMGB1P35-201ENST00000503360 TRAV13-2A0A0B4J235 113 aa0.97□□□□□ -2.25
HMGB1P35-201ENST00000503360 TRAV12-3A0A0B4J271 114 aa0.97□□□□□ -2.25
HMGB1P35-201ENST00000503360 KRTAP12-1P59990 96 aa0.97□□□□□ -2.25
HMGB1P35-201ENST00000503360 UBA52P62987 128 aaKnown RBP0.97□□□□□ -2.25
HMGB1P35-201ENST00000503360 DEFB103AP81534 67 aa0.97□□□□□ -2.25
HMGB1P35-201ENST00000503360 UNQ6190/PRO20217Q6UXQ8 127 aa0.97□□□□□ -2.25
HMGB1P35-201ENST00000503360 CYP2G1PQ6ZSU1 146 aa0.97□□□□□ -2.25
HMGB1P35-201ENST00000503360 MYOZ3Q8TDC0 251 aa0.97□□□□□ -2.25
HMGB1P35-201ENST00000503360 PPP1R1CQ8WVI7 109 aa0.97□□□□□ -2.25
HMGB1P35-201ENST00000503360 CHD3Q12873 2000 aaKnown RBP0.97□□□□□ -2.25
HMGB1P35-201ENST00000503360 ARFGEF3Q5TH69 2177 aa0.97□□□□□ -2.25
HMGB1P35-201ENST00000503360 CEP192Q8TEP8 1941 aa0.97□□□□□ -2.25
HMGB1P35-201ENST00000503360 CPSF1Q10570 1443 aaKnown RBP0.97□□□□□ -2.25
HMGB1P35-201ENST00000503360 ANK1P16157 1881 aa0.97□□□□□ -2.25
HMGB1P35-201ENST00000503360 TRPM7Q96QT4 1865 aa0.97□□□□□ -2.25
HMGB1P35-201ENST00000503360 BRWD1Q9NSI6 2320 aa0.97□□□□□ -2.25
HMGB1P35-201ENST00000503360 KDM6BO15054 1643 aa0.97□□□□□ -2.25
HMGB1P35-201ENST00000503360 STRCP1A6NGW2 1772 aa0.96□□□□□ -2.26
HMGB1P35-201ENST00000503360 INTS1Q8N201 2190 aaKnown RBP0.96□□□□□ -2.26
HMGB1P35-201ENST00000503360 COL5A3P25940 1745 aaPredicted RBP0.96□□□□□ -2.26
HMGB1P35-201ENST00000503360 KIAA1551Q9HCM1 1747 aa0.96□□□□□ -2.26
HMGB1P35-201ENST00000503360 TRBV6-7A0A0A0MS04 114 aa0.96□□□□□ -2.26
HMGB1P35-201ENST00000503360 IGKV3D-7A0A0C4DH55 119 aa0.96□□□□□ -2.26
HMGB1P35-201ENST00000503360 IGKV3OR2-268A0A0C4DH90 116 aa0.96□□□□□ -2.26
HMGB1P35-201ENST00000503360 RBAKDNA6NC62 111 aa0.96□□□□□ -2.26
HMGB1P35-201ENST00000503360 HCG22E2RYF7 251 aa0.96□□□□□ -2.26
HMGB1P35-201ENST00000503360 J3QKU1 62 aa0.96□□□□□ -2.26
HMGB1P35-201ENST00000503360 HCRTO43612 131 aa0.96□□□□□ -2.26
HMGB1P35-201ENST00000503360 SIX6O95475 246 aa0.96□□□□□ -2.26
HMGB1P35-201ENST00000503360 TFF1P04155 84 aa0.96□□□□□ -2.26
HMGB1P35-201ENST00000503360 IL9P15248 144 aa0.96□□□□□ -2.26
HMGB1P35-201ENST00000503360 SNCAP37840 140 aa0.96□□□□□ -2.26
HMGB1P35-201ENST00000503360 FXYD4P59646 89 aa0.96□□□□□ -2.26
HMGB1P35-201ENST00000503360 KRTDAPP60985 99 aa0.96□□□□□ -2.26
HMGB1P35-201ENST00000503360 DEFB132Q7Z7B7 95 aa0.96□□□□□ -2.26
HMGB1P35-201ENST00000503360 ZNF625Q96I27 306 aaPredicted RBP0.96□□□□□ -2.26
HMGB1P35-201ENST00000503360 AMELYQ99218 206 aa0.96□□□□□ -2.26
HMGB1P35-201ENST00000503360 MED14O60244 1454 aa0.96□□□□□ -2.26
HMGB1P35-201ENST00000503360 TEX14Q8IWB6 1497 aa0.96□□□□□ -2.26
HMGB1P35-201ENST00000503360 C10orf71Q711Q0 1435 aa0.96□□□□□ -2.26
HMGB1P35-201ENST00000503360 CC2D2AQ9P2K1 1620 aa0.96□□□□□ -2.26
HMGB1P35-201ENST00000503360 MUC22E2RYF6 1773 aaPredicted RBP0.96□□□□□ -2.26
HMGB1P35-201ENST00000503360 RBBP6Q7Z6E9 1792 aaKnown RBP0.96□□□□□ -2.26
HMGB1P35-201ENST00000503360 PRDM2Q13029 1718 aa0.95□□□□□ -2.26
HMGB1P35-201ENST00000503360 MYOFQ9NZM1 2061 aa0.95□□□□□ -2.26
HMGB1P35-201ENST00000503360 TOPAZ1Q8N9V7 1692 aa0.95□□□□□ -2.26
HMGB1P35-201ENST00000503360 SIP14410 1827 aa0.95□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms