RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 LINC01546A6NGU7 62 aa5.16□□□□□ -1.58
USP39-219ENST00000496047 CBY3A6NI87 242 aa5.16□□□□□ -1.58
USP39-219ENST00000496047 PRSS47A8MTI9 375 aa5.16□□□□□ -1.58
USP39-219ENST00000496047 H7C1H1 209 aa5.16□□□□□ -1.58
USP39-219ENST00000496047 NXPH4O95158 308 aa5.16□□□□□ -1.58
USP39-219ENST00000496047 EDN2P20800 178 aa5.16□□□□□ -1.58
USP39-219ENST00000496047 FCER1GP30273 86 aa5.16□□□□□ -1.58
USP39-219ENST00000496047 ZNF56Q15929 161 aa5.16□□□□□ -1.58
USP39-219ENST00000496047 SPINK13Q1W4C9 94 aa5.16□□□□□ -1.58
USP39-219ENST00000496047 PRR31Q5SQ13 230 aa5.16□□□□□ -1.58
USP39-219ENST00000496047 LCE4AQ5TA78 99 aa5.16□□□□□ -1.58
USP39-219ENST00000496047 SPATA12Q7Z6I5 190 aa5.16□□□□□ -1.58
USP39-219ENST00000496047 STHQ8IWL8 128 aa5.16□□□□□ -1.58
USP39-219ENST00000496047 TMEM61Q8N0U2 210 aa5.16□□□□□ -1.58
USP39-219ENST00000496047 DLX4Q92988 240 aaPredicted RBP5.16□□□□□ -1.58
USP39-219ENST00000496047 IFI27L1Q96BM0 104 aa5.16□□□□□ -1.58
USP39-219ENST00000496047 ZNF747Q9BV97 191 aa5.16□□□□□ -1.58
USP39-219ENST00000496047 SMIM2Q9BVW6 85 aa5.16□□□□□ -1.58
USP39-219ENST00000496047 MAP6D1Q9H9H5 199 aa5.16□□□□□ -1.58
USP39-219ENST00000496047 SCRT2Q9NQ03 307 aa5.16□□□□□ -1.58
USP39-219ENST00000496047 MSRB1Q9NZV6 116 aa5.16□□□□□ -1.58
USP39-219ENST00000496047 WNK1Q9H4A3 2382 aa5.16□□□□□ -1.58
USP39-219ENST00000496047 OR11H12B2RN74 326 aa5.15□□□□□ -1.59
USP39-219ENST00000496047 F5H697 171 aa5.15□□□□□ -1.59
USP39-219ENST00000496047 NUDT3O95989 172 aa5.15□□□□□ -1.59
USP39-219ENST00000496047 RNASE3P12724 160 aaKnown RBP5.15□□□□□ -1.59
USP39-219ENST00000496047 DEFB1P60022 68 aa5.15□□□□□ -1.59
USP39-219ENST00000496047 SUMO2P61956 95 aaKnown RBP5.15□□□□□ -1.59
USP39-219ENST00000496047 CTAG1AP78358 180 aa5.15□□□□□ -1.59
USP39-219ENST00000496047 KRTAP1-1Q07627 177 aa5.15□□□□□ -1.59
USP39-219ENST00000496047 FHL3Q13643 280 aa5.15□□□□□ -1.59
USP39-219ENST00000496047 DEFB114Q30KQ6 69 aa5.15□□□□□ -1.59
USP39-219ENST00000496047 LINC01545Q5VT33 79 aa5.15□□□□□ -1.59
USP39-219ENST00000496047 Q6ZN92 141 aa5.15□□□□□ -1.59
USP39-219ENST00000496047 C18orf65Q6ZTR6 163 aa5.15□□□□□ -1.59
USP39-219ENST00000496047 DEFB125Q8N687 156 aa5.15□□□□□ -1.59
USP39-219ENST00000496047 Q8N976 141 aa5.15□□□□□ -1.59
USP39-219ENST00000496047 LINC01006Q8NI28 216 aa5.15□□□□□ -1.59
USP39-219ENST00000496047 C14orf144Q96I85 54 aa5.15□□□□□ -1.59
USP39-219ENST00000496047 DUX3Q96PT4 197 aa5.15□□□□□ -1.59
USP39-219ENST00000496047 KIR2DL4Q99706 377 aa5.15□□□□□ -1.59
USP39-219ENST00000496047 ESM1Q9NQ30 184 aa5.15□□□□□ -1.59
USP39-219ENST00000496047 GOLT1BQ9Y3E0 138 aa5.15□□□□□ -1.59
USP39-219ENST00000496047 SELENOKQ9Y6D0 94 aa5.15□□□□□ -1.59
USP39-219ENST00000496047 NACAE9PAV3 2078 aa5.14□□□□□ -1.59
USP39-219ENST00000496047 TRAV12-2A0A075B6T6 113 aa5.14□□□□□ -1.59
USP39-219ENST00000496047 A8MTW9 85 aa5.14□□□□□ -1.59
USP39-219ENST00000496047 H3BMM0 161 aa5.14□□□□□ -1.59
USP39-219ENST00000496047 GNRH2O43555 120 aa5.14□□□□□ -1.59
USP39-219ENST00000496047 SAP30O75446 220 aa5.14□□□□□ -1.59
USP39-219ENST00000496047 PRSS1P07477 247 aa5.14□□□□□ -1.59
USP39-219ENST00000496047 CD28P10747 220 aa5.14□□□□□ -1.59
USP39-219ENST00000496047 RPL32P62910 135 aaKnown RBP5.14□□□□□ -1.59
USP39-219ENST00000496047 CD300EQ496F6 205 aaPredicted RBP5.14□□□□□ -1.59
USP39-219ENST00000496047 PIK3CD-AS1Q5SR53 167 aa5.14□□□□□ -1.59
USP39-219ENST00000496047 TRPT1Q86TN4 253 aaKnown RBP5.14□□□□□ -1.59
USP39-219ENST00000496047 NDUFA11Q86Y39 141 aa5.14□□□□□ -1.59
USP39-219ENST00000496047 ATOH7Q8N100 152 aa5.14□□□□□ -1.59
USP39-219ENST00000496047 C14orf178Q8N769 122 aaPredicted RBP5.14□□□□□ -1.59
USP39-219ENST00000496047 C9orf85Q96MD7 179 aa5.14□□□□□ -1.59
USP39-219ENST00000496047 CITED2Q99967 270 aaPredicted RBP5.14□□□□□ -1.59
USP39-219ENST00000496047 TMEM208Q9BTX3 173 aa5.14□□□□□ -1.59
USP39-219ENST00000496047 NOTCH1P46531 2555 aa5.14□□□□□ -1.59
USP39-219ENST00000496047 SORL1Q92673 2214 aa5.13□□□□□ -1.59
USP39-219ENST00000496047 IGHV3-16A0A0C4DH30 117 aa5.13□□□□□ -1.59
USP39-219ENST00000496047 KNCNA6PVL3 124 aa5.13□□□□□ -1.59
USP39-219ENST00000496047 A8MWV9 139 aa5.13□□□□□ -1.59
USP39-219ENST00000496047 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.13□□□□□ -1.59
USP39-219ENST00000496047 RHODO00212 210 aa5.13□□□□□ -1.59
USP39-219ENST00000496047 IGLC3P0DOY3 106 aa5.13□□□□□ -1.59
USP39-219ENST00000496047 ZNF124Q15973 351 aa5.13□□□□□ -1.59
USP39-219ENST00000496047 FAM74A4Q5TZK3 123 aa5.13□□□□□ -1.59
USP39-219ENST00000496047 SLC25A34Q6PIV7 304 aa5.13□□□□□ -1.59
USP39-219ENST00000496047 C11orf44Q8N8P7 122 aa5.13□□□□□ -1.59
USP39-219ENST00000496047 NRACQ8N912 160 aa5.13□□□□□ -1.59
USP39-219ENST00000496047 TMEM158Q8WZ71 300 aa5.13□□□□□ -1.59
USP39-219ENST00000496047 LINC00467Q9BRT7 94 aa5.13□□□□□ -1.59
USP39-219ENST00000496047 C2orf88Q9BSF0 95 aa5.13□□□□□ -1.59
USP39-219ENST00000496047 SPXQ9BT56 116 aa5.13□□□□□ -1.59
USP39-219ENST00000496047 C1QTNF4Q9BXJ3 329 aa5.13□□□□□ -1.59
USP39-219ENST00000496047 TRAV26-2A0A0B4J265 109 aa5.12□□□□□ -1.59
USP39-219ENST00000496047 M0R2P5 195 aa5.12□□□□□ -1.59
USP39-219ENST00000496047 VCYO14598 125 aa5.12□□□□□ -1.59
USP39-219ENST00000496047 AMTNQ6UX39 209 aa5.12□□□□□ -1.59
USP39-219ENST00000496047 ADAMTSL5Q6ZMM2 481 aa5.12□□□□□ -1.59
USP39-219ENST00000496047 LINC00173Q6ZV60 143 aa5.12□□□□□ -1.59
USP39-219ENST00000496047 ZNF575Q86XF7 245 aa5.12□□□□□ -1.59
USP39-219ENST00000496047 POM121L12Q8N7R1 296 aa5.12□□□□□ -1.59
USP39-219ENST00000496047 C18orf15Q96N68 181 aa5.12□□□□□ -1.59
USP39-219ENST00000496047 FAM110AQ9BQ89 295 aa5.12□□□□□ -1.59
USP39-219ENST00000496047 CYSLTR1Q9Y271 337 aa5.12□□□□□ -1.59
USP39-219ENST00000496047 MRPS16Q9Y3D3 137 aaKnown RBP5.12□□□□□ -1.59
USP39-219ENST00000496047 IGLV2-18A0A075B6J9 118 aa5.11□□□□□ -1.59
USP39-219ENST00000496047 A0A096LNJ9 63 aa5.11□□□□□ -1.59
USP39-219ENST00000496047 DPM2O94777 84 aa5.11□□□□□ -1.59
USP39-219ENST00000496047 LY6G6DO95868 133 aa5.11□□□□□ -1.59
USP39-219ENST00000496047 IGKCP01834 107 aa5.11□□□□□ -1.59
USP39-219ENST00000496047 IGLL1P15814 213 aa5.11□□□□□ -1.59
USP39-219ENST00000496047 GATA1P15976 413 aaPredicted RBP5.11□□□□□ -1.59
USP39-219ENST00000496047 PLNP26678 52 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms