RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 PHLDA3Q9Y5J5 127 aa8.03□□□□□ -1.12
UBA3-211ENST00000493957 A0A087WWL8 130 aa8.02□□□□□ -1.13
UBA3-211ENST00000493957 SRP19P09132 144 aaKnown RBP8.02□□□□□ -1.13
UBA3-211ENST00000493957 CXCL1P09341 107 aa8.02□□□□□ -1.13
UBA3-211ENST00000493957 SSTP61278 116 aa8.02□□□□□ -1.13
UBA3-211ENST00000493957 SLAQ13239 276 aa8.02□□□□□ -1.13
UBA3-211ENST00000493957 Q6ZR54 194 aa8.02□□□□□ -1.13
UBA3-211ENST00000493957 OR2D3Q8NGH3 330 aa8.02□□□□□ -1.13
UBA3-211ENST00000493957 SMIM12Q96EX1 92 aa8.02□□□□□ -1.13
UBA3-211ENST00000493957 EPPK1P58107 5090 aaKnown RBP8.01□□□□□ -1.13
UBA3-211ENST00000493957 A8MWV9 139 aa8.01□□□□□ -1.13
UBA3-211ENST00000493957 SNAI2O43623 268 aa8.01□□□□□ -1.13
UBA3-211ENST00000493957 NXPH4O95158 308 aa8.01□□□□□ -1.13
UBA3-211ENST00000493957 MED14OSP0DP75 135 aa8.01□□□□□ -1.13
UBA3-211ENST00000493957 MRPL23Q16540 153 aaKnown RBP8.01□□□□□ -1.13
UBA3-211ENST00000493957 FAM74A4Q5TZK3 123 aa8.01□□□□□ -1.13
UBA3-211ENST00000493957 ZFP82Q8N141 532 aa8.01□□□□□ -1.13
UBA3-211ENST00000493957 C14orf178Q8N769 122 aaPredicted RBP8.01□□□□□ -1.13
UBA3-211ENST00000493957 SYT8Q8NBV8 401 aa8.01□□□□□ -1.13
UBA3-211ENST00000493957 NUDT10Q8NFP7 164 aa8.01□□□□□ -1.13
UBA3-211ENST00000493957 NUDT11Q96G61 164 aa8.01□□□□□ -1.13
UBA3-211ENST00000493957 SFRP2Q96HF1 295 aa8.01□□□□□ -1.13
UBA3-211ENST00000493957 RNASE7Q9H1E1 156 aaKnown RBP8.01□□□□□ -1.13
UBA3-211ENST00000493957 MRPS16Q9Y3D3 137 aaKnown RBP8.01□□□□□ -1.13
UBA3-211ENST00000493957 P01737 135 aa8□□□□□ -1.13
UBA3-211ENST00000493957 CRYGDP07320 174 aa8□□□□□ -1.13
UBA3-211ENST00000493957 IGLC6P0CF74 106 aa8□□□□□ -1.13
UBA3-211ENST00000493957 SRIP30626 198 aa8□□□□□ -1.13
UBA3-211ENST00000493957 PIK3CD-AS1Q5SR53 167 aa8□□□□□ -1.13
UBA3-211ENST00000493957 LYPD5Q6UWN5 251 aa8□□□□□ -1.13
UBA3-211ENST00000493957 NEGR1Q7Z3B1 354 aa8□□□□□ -1.13
UBA3-211ENST00000493957 DAZAP1Q96EP5 407 aaKnown RBP8□□□□□ -1.13
UBA3-211ENST00000493957 KRTAP1-5Q9BYS1 174 aa8□□□□□ -1.13
UBA3-211ENST00000493957 DNAH2Q9P225 4427 aa7.99□□□□□ -1.13
UBA3-211ENST00000493957 TRBV6-4A0A1B0GX49 114 aa7.99□□□□□ -1.13
UBA3-211ENST00000493957 OR5AL1P0C617 328 aa7.99□□□□□ -1.13
UBA3-211ENST00000493957 FAM3BP58499 235 aaPredicted RBP7.99□□□□□ -1.13
UBA3-211ENST00000493957 RHOHQ15669 191 aa7.99□□□□□ -1.13
UBA3-211ENST00000493957 ZFP2Q6ZN57 461 aa7.99□□□□□ -1.13
UBA3-211ENST00000493957 SMIM7Q9BQ49 75 aa7.99□□□□□ -1.13
UBA3-211ENST00000493957 UPK3BQ9BT76 320 aa7.99□□□□□ -1.13
UBA3-211ENST00000493957 TPPP3Q9BW30 176 aa7.99□□□□□ -1.13
UBA3-211ENST00000493957 MSRB1Q9NZV6 116 aa7.99□□□□□ -1.13
UBA3-211ENST00000493957 DNAH17Q9UFH2 4485 aa7.99□□□□□ -1.13
UBA3-211ENST00000493957 NBDYA0A0U1RRE5 68 aa7.98□□□□□ -1.13
UBA3-211ENST00000493957 RTL8CO15255 209 aa7.98□□□□□ -1.13
UBA3-211ENST00000493957 FER1L6-AS1Q8NA97 138 aa7.98□□□□□ -1.13
UBA3-211ENST00000493957 RPP21Q9H633 154 aaKnown RBP7.98□□□□□ -1.13
UBA3-211ENST00000493957 Q9H8V8 135 aa7.98□□□□□ -1.13
UBA3-211ENST00000493957 GAGE12JA6NER3 117 aa7.97□□□□□ -1.13
UBA3-211ENST00000493957 ZNF727A8MUV8 499 aa7.97□□□□□ -1.13
UBA3-211ENST00000493957 CIDEAO60543 219 aa7.97□□□□□ -1.13
UBA3-211ENST00000493957 LINC00694P0DN24 101 aa7.97□□□□□ -1.13
UBA3-211ENST00000493957 RPS20P60866 119 aaKnown RBP7.97□□□□□ -1.13
UBA3-211ENST00000493957 IFITM2Q01629 132 aa7.97□□□□□ -1.13
UBA3-211ENST00000493957 GAGE1Q13065 139 aa7.97□□□□□ -1.13
UBA3-211ENST00000493957 GAGE4Q13068 117 aa7.97□□□□□ -1.13
UBA3-211ENST00000493957 GAGE5Q13069 117 aa7.97□□□□□ -1.13
UBA3-211ENST00000493957 GAGE13Q4V321 117 aa7.97□□□□□ -1.13
UBA3-211ENST00000493957 SPANXN1Q5VSR9 72 aa7.97□□□□□ -1.13
UBA3-211ENST00000493957 LINC01551Q86U37 167 aa7.97□□□□□ -1.13
UBA3-211ENST00000493957 WFDC10BQ8IUB3 73 aa7.97□□□□□ -1.13
UBA3-211ENST00000493957 PRADC1Q9BSG0 188 aa7.97□□□□□ -1.13
UBA3-211ENST00000493957 BIN3Q9NQY0 253 aa7.97□□□□□ -1.13
UBA3-211ENST00000493957 RHODO00212 210 aa7.96□□□□□ -1.14
UBA3-211ENST00000493957 NDUFS6O75380 124 aaKnown RBP7.96□□□□□ -1.14
UBA3-211ENST00000493957 LYZL1Q6UWQ5 148 aa7.96□□□□□ -1.14
UBA3-211ENST00000493957 GTSF1Q8WW33 167 aa7.96□□□□□ -1.14
UBA3-211ENST00000493957 KIF25-AS1Q9Y6Z4 181 aa7.96□□□□□ -1.14
UBA3-211ENST00000493957 GATCO43716 136 aaKnown RBP7.95□□□□□ -1.14
UBA3-211ENST00000493957 CTRLP40313 264 aa7.95□□□□□ -1.14
UBA3-211ENST00000493957 LINC00315P59091 139 aa7.95□□□□□ -1.14
UBA3-211ENST00000493957 ZNF56Q15929 161 aa7.95□□□□□ -1.14
UBA3-211ENST00000493957 LY96Q9Y6Y9 160 aa7.95□□□□□ -1.14
UBA3-211ENST00000493957 FAT2Q9NYQ8 4349 aa7.95□□□□□ -1.14
UBA3-211ENST00000493957 SIVA1O15304 175 aa7.94□□□□□ -1.14
UBA3-211ENST00000493957 RPL23P62829 140 aaKnown RBP7.94□□□□□ -1.14
UBA3-211ENST00000493957 PEA15Q15121 130 aa7.94□□□□□ -1.14
UBA3-211ENST00000493957 FAM231DQ6ZW35 169 aa7.94□□□□□ -1.14
UBA3-211ENST00000493957 ATP6V0E2Q8NHE4 81 aa7.94□□□□□ -1.14
UBA3-211ENST00000493957 XKRY2A2RUG3 117 aa7.93□□□□□ -1.14
UBA3-211ENST00000493957 ERVFC1-1P60608 527 aa7.93□□□□□ -1.14
UBA3-211ENST00000493957 CACNG7P62955 275 aa7.93□□□□□ -1.14
UBA3-211ENST00000493957 C1orf134Q5TEV5 83 aa7.93□□□□□ -1.14
UBA3-211ENST00000493957 AP1S3Q96PC3 154 aa7.93□□□□□ -1.14
UBA3-211ENST00000493957 KRTAP9-7A8MTY7 169 aa7.92□□□□□ -1.14
UBA3-211ENST00000493957 MGPP08493 103 aa7.92□□□□□ -1.14
UBA3-211ENST00000493957 NTF3P20783 257 aa7.92□□□□□ -1.14
UBA3-211ENST00000493957 EVI2AP22794 236 aa7.92□□□□□ -1.14
UBA3-211ENST00000493957 TIRAPP58753 221 aa7.92□□□□□ -1.14
UBA3-211ENST00000493957 RAB4BP61018 213 aa7.92□□□□□ -1.14
UBA3-211ENST00000493957 TMEM241Q24JQ0 296 aa7.92□□□□□ -1.14
UBA3-211ENST00000493957 SH2D6Q7Z4S9 175 aa7.92□□□□□ -1.14
UBA3-211ENST00000493957 C6orf223Q8N319 242 aa7.92□□□□□ -1.14
UBA3-211ENST00000493957 NEXN-AS1Q8NBZ9 246 aa7.92□□□□□ -1.14
UBA3-211ENST00000493957 ISOC2Q96AB3 205 aa7.92□□□□□ -1.14
UBA3-211ENST00000493957 PGLYRP4Q96LB8 373 aa7.92□□□□□ -1.14
UBA3-211ENST00000493957 GTSF1LQ9H1H1 148 aa7.92□□□□□ -1.14
UBA3-211ENST00000493957 TNFRSF18Q9Y5U5 241 aa7.92□□□□□ -1.14
UBA3-211ENST00000493957 A0A1W2PPQ1 181 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 121.8 ms