RNA–Protein interactions for RNA: ENST00000492954.1

PTPRU-207, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 625 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-207ENST00000492954 IBA57-AS1B1ANH7 110 aa12.11□□□□□ -0.47
PTPRU-207ENST00000492954 M0R381 172 aa12.11□□□□□ -0.47
PTPRU-207ENST00000492954 RHODO00212 210 aa12.11□□□□□ -0.47
PTPRU-207ENST00000492954 S100A9P06702 114 aaKnown RBP12.11□□□□□ -0.47
PTPRU-207ENST00000492954 FAM74A4Q5TZK3 123 aa12.11□□□□□ -0.47
PTPRU-207ENST00000492954 ABCA13Q86UQ4 5058 aa12.1□□□□□ -0.47
PTPRU-207ENST00000492954 A0A087WWL8 130 aa12.1□□□□□ -0.47
PTPRU-207ENST00000492954 RPL19P84098 196 aaKnown RBP12.1□□□□□ -0.47
PTPRU-207ENST00000492954 CDPF1Q6NVV7 123 aa12.1□□□□□ -0.47
PTPRU-207ENST00000492954 BAGE2Q86Y30 109 aa12.1□□□□□ -0.47
PTPRU-207ENST00000492954 SFRP2Q96HF1 295 aa12.1□□□□□ -0.47
PTPRU-207ENST00000492954 Q9HAA7 133 aa12.1□□□□□ -0.47
PTPRU-207ENST00000492954 BOLA1Q9Y3E2 137 aa12.1□□□□□ -0.47
PTPRU-207ENST00000492954 CCL20P78556 96 aa12.09□□□□□ -0.47
PTPRU-207ENST00000492954 ZFP82Q8N141 532 aa12.09□□□□□ -0.47
PTPRU-207ENST00000492954 Q8N3U1 123 aa12.09□□□□□ -0.47
PTPRU-207ENST00000492954 MLST8Q9BVC4 326 aa12.09□□□□□ -0.47
PTPRU-207ENST00000492954 PSCAO43653 123 aa12.08□□□□□ -0.48
PTPRU-207ENST00000492954 GNG13Q9P2W3 67 aa12.08□□□□□ -0.48
PTPRU-207ENST00000492954 MANBALQ9NQG1 85 aa12.07□□□□□ -0.48
PTPRU-207ENST00000492954 RPL35P42766 123 aaKnown RBP12.06□□□□□ -0.48
PTPRU-207ENST00000492954 PRR27Q6MZM9 219 aa12.06□□□□□ -0.48
PTPRU-207ENST00000492954 Q8N1X5 172 aa12.06□□□□□ -0.48
PTPRU-207ENST00000492954 OR10AG1Q8NH19 301 aa12.06□□□□□ -0.48
PTPRU-207ENST00000492954 DERL1Q9BUN8 251 aa12.06□□□□□ -0.48
PTPRU-207ENST00000492954 TRAV1-1A0A0B4J248 108 aa12.05□□□□□ -0.48
PTPRU-207ENST00000492954 LRCOL1A6NCL2 159 aa12.05□□□□□ -0.48
PTPRU-207ENST00000492954 CXCL1P09341 107 aa12.05□□□□□ -0.48
PTPRU-207ENST00000492954 KRTAP10-1P60331 282 aa12.05□□□□□ -0.48
PTPRU-207ENST00000492954 TCTE3Q8IZS6 198 aa12.05□□□□□ -0.48
PTPRU-207ENST00000492954 C11orf52Q96A22 123 aa12.05□□□□□ -0.48
PTPRU-207ENST00000492954 A0A087WWC5 75 aa12.04□□□□□ -0.48
PTPRU-207ENST00000492954 RAB5CP51148 216 aa12.04□□□□□ -0.48
PTPRU-207ENST00000492954 LAGE3Q14657 143 aa12.04□□□□□ -0.48
PTPRU-207ENST00000492954 EIF5AL1Q6IS14 154 aaKnown RBP12.04□□□□□ -0.48
PTPRU-207ENST00000492954 MUC21A0A0G2JKD1 596 aa12.03□□□□□ -0.48
PTPRU-207ENST00000492954 MUC21A0A140T8X8 626 aa12.03□□□□□ -0.48
PTPRU-207ENST00000492954 SULT1A2P50226 295 aa12.03□□□□□ -0.48
PTPRU-207ENST00000492954 DAZ4Q86SG3 579 aaKnown RBP12.03□□□□□ -0.48
PTPRU-207ENST00000492954 DAZ3Q9NR90 486 aaKnown RBP12.03□□□□□ -0.48
PTPRU-207ENST00000492954 SNAI2O43623 268 aa12.02□□□□□ -0.49
PTPRU-207ENST00000492954 TRBV10-1A0A0K0K1A3 114 aa12.01□□□□□ -0.49
PTPRU-207ENST00000492954 TEX46H3BTG2 121 aa12.01□□□□□ -0.49
PTPRU-207ENST00000492954 RPL36AP83881 106 aaKnown RBP12.01□□□□□ -0.49
PTPRU-207ENST00000492954 CENPWQ5EE01 88 aa12.01□□□□□ -0.49
PTPRU-207ENST00000492954 RPL36ALQ969Q0 106 aaKnown RBP12.01□□□□□ -0.49
PTPRU-207ENST00000492954 SSBP4Q9BWG4 385 aaPredicted RBP12.01□□□□□ -0.49
PTPRU-207ENST00000492954 C1QBP02746 253 aa12□□□□□ -0.49
PTPRU-207ENST00000492954 OR5AL1P0C617 328 aa12□□□□□ -0.49
PTPRU-207ENST00000492954 GCSHP23434 173 aa12□□□□□ -0.49
PTPRU-207ENST00000492954 XGP55808 180 aa12□□□□□ -0.49
PTPRU-207ENST00000492954 UBE2D3P61077 147 aa12□□□□□ -0.49
PTPRU-207ENST00000492954 SSTP61278 116 aa12□□□□□ -0.49
PTPRU-207ENST00000492954 UBE2D2P62837 147 aa12□□□□□ -0.49
PTPRU-207ENST00000492954 ZNF56Q15929 161 aa12□□□□□ -0.49
PTPRU-207ENST00000492954 SPANXN1Q5VSR9 72 aa12□□□□□ -0.49
PTPRU-207ENST00000492954 TRBV7-3A0A075B6L6 115 aa11.99□□□□□ -0.49
PTPRU-207ENST00000492954 IGLV5-52A0A0A0MRZ9 124 aa11.99□□□□□ -0.49
PTPRU-207ENST00000492954 RAB19A4D1S5 217 aa11.99□□□□□ -0.49
PTPRU-207ENST00000492954 IGLV2-8P01709 118 aa11.99□□□□□ -0.49
PTPRU-207ENST00000492954 RAB4BP61018 213 aa11.99□□□□□ -0.49
PTPRU-207ENST00000492954 SLC51BQ86UW2 128 aa11.99□□□□□ -0.49
PTPRU-207ENST00000492954 NIT1Q86X76 327 aa11.99□□□□□ -0.49
PTPRU-207ENST00000492954 Q8N814 137 aa11.99□□□□□ -0.49
PTPRU-207ENST00000492954 TM2D2Q9BX73 214 aa11.99□□□□□ -0.49
PTPRU-207ENST00000492954 TRAV8-3A0A0A6YYJ7 113 aa11.98□□□□□ -0.49
PTPRU-207ENST00000492954 MEF2BQ02080 365 aaPredicted RBP11.98□□□□□ -0.49
PTPRU-207ENST00000492954 Q6ZNX1 250 aa11.98□□□□□ -0.49
PTPRU-207ENST00000492954 NEXN-AS1Q8NBZ9 246 aa11.98□□□□□ -0.49
PTPRU-207ENST00000492954 NTN5Q8WTR8 489 aaPredicted RBP11.98□□□□□ -0.49
PTPRU-207ENST00000492954 URGCP-MRPS24S4R325 110 aa11.98□□□□□ -0.49
PTPRU-207ENST00000492954 PDE6DO43924 150 aa11.97□□□□□ -0.49
PTPRU-207ENST00000492954 GZMBP10144 247 aa11.97□□□□□ -0.49
PTPRU-207ENST00000492954 WFDC2Q14508 124 aa11.97□□□□□ -0.49
PTPRU-207ENST00000492954 TOR2AQ5JU69 321 aa11.97□□□□□ -0.49
PTPRU-207ENST00000492954 OR10G8Q8NGN5 311 aa11.97□□□□□ -0.49
PTPRU-207ENST00000492954 FAT1Q14517 4588 aa11.96□□□□□ -0.49
PTPRU-207ENST00000492954 RBFOX3A6NFN3 312 aa11.96□□□□□ -0.49
PTPRU-207ENST00000492954 IFNA1P01562 189 aa11.96□□□□□ -0.49
PTPRU-207ENST00000492954 BCL2P10415 239 aa11.96□□□□□ -0.49
PTPRU-207ENST00000492954 GNG4P50150 75 aa11.96□□□□□ -0.49
PTPRU-207ENST00000492954 OR2D3Q8NGH3 330 aa11.96□□□□□ -0.49
PTPRU-207ENST00000492954 DNAJC30Q96LL9 226 aa11.96□□□□□ -0.49
PTPRU-207ENST00000492954 TPPP3Q9BW30 176 aa11.96□□□□□ -0.49
PTPRU-207ENST00000492954 C19orf71A6NCJ1 209 aa11.95□□□□□ -0.5
PTPRU-207ENST00000492954 F5H697 171 aa11.95□□□□□ -0.5
PTPRU-207ENST00000492954 LECT2O14960 151 aa11.95□□□□□ -0.5
PTPRU-207ENST00000492954 DAZAP1Q96EP5 407 aaKnown RBP11.95□□□□□ -0.5
PTPRU-207ENST00000492954 AP1S3Q96PC3 154 aa11.95□□□□□ -0.5
PTPRU-207ENST00000492954 MED9Q9NWA0 146 aa11.95□□□□□ -0.5
PTPRU-207ENST00000492954 KLK12Q9UKR0 248 aa11.95□□□□□ -0.5
PTPRU-207ENST00000492954 hCG_2014768A0A024R1R8 64 aa11.94□□□□□ -0.5
PTPRU-207ENST00000492954 TRBV20OR9-2A0A075B6H5 130 aa11.94□□□□□ -0.5
PTPRU-207ENST00000492954 A0A087WX48 190 aa11.94□□□□□ -0.5
PTPRU-207ENST00000492954 IGLC6P0CF74 106 aa11.94□□□□□ -0.5
PTPRU-207ENST00000492954 AKAP14Q86UN6 197 aa11.94□□□□□ -0.5
PTPRU-207ENST00000492954 FER1L6-AS1Q8NA97 138 aa11.94□□□□□ -0.5
PTPRU-207ENST00000492954 SMIM12Q96EX1 92 aa11.94□□□□□ -0.5
PTPRU-207ENST00000492954 VAX2Q9UIW0 290 aa11.94□□□□□ -0.5
PTPRU-207ENST00000492954 KIF25-AS1Q9Y6Z4 181 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms