RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 ZNF815PA8K554 130 aa11.99□□□□□ -0.49
SEMA4D-220ENST00000492386 F5H697 171 aa11.99□□□□□ -0.49
SEMA4D-220ENST00000492386 LGALS9O00182 355 aa11.99□□□□□ -0.49
SEMA4D-220ENST00000492386 RPL39P62891 51 aaKnown RBP11.99□□□□□ -0.49
SEMA4D-220ENST00000492386 DEFB112Q30KQ8 113 aa11.99□□□□□ -0.49
SEMA4D-220ENST00000492386 SDHAF1A6NFY7 115 aa11.99□□□□□ -0.49
SEMA4D-220ENST00000492386 PLEKHB2Q96CS7 222 aa11.99□□□□□ -0.49
SEMA4D-220ENST00000492386 MDFICQ9P1T7 246 aa11.99□□□□□ -0.49
SEMA4D-220ENST00000492386 TRAV12-2A0A075B6T6 113 aa11.98□□□□□ -0.49
SEMA4D-220ENST00000492386 LINC01549A6NIU2 74 aa11.98□□□□□ -0.49
SEMA4D-220ENST00000492386 PMVKQ15126 192 aa11.98□□□□□ -0.49
SEMA4D-220ENST00000492386 CD300EQ496F6 205 aaPredicted RBP11.98□□□□□ -0.49
SEMA4D-220ENST00000492386 KIR2DL4Q99706 377 aa11.98□□□□□ -0.49
SEMA4D-220ENST00000492386 TRBV6-5A0A0K0K1A5 114 aa11.98□□□□□ -0.49
SEMA4D-220ENST00000492386 TRBV27A0A0K0K1C4 114 aa11.98□□□□□ -0.49
SEMA4D-220ENST00000492386 TEX48A0A1B0GUV7 120 aa11.98□□□□□ -0.49
SEMA4D-220ENST00000492386 K7EQG2 157 aa11.98□□□□□ -0.49
SEMA4D-220ENST00000492386 IGKV3-20P01619 116 aa11.98□□□□□ -0.49
SEMA4D-220ENST00000492386 GATA3P23771 443 aa11.98□□□□□ -0.49
SEMA4D-220ENST00000492386 TMEM141Q96I45 108 aa11.98□□□□□ -0.49
SEMA4D-220ENST00000492386 USP9XQ93008 2570 aaPredicted RBP11.98□□□□□ -0.49
SEMA4D-220ENST00000492386 EMP1P54849 157 aa11.97□□□□□ -0.49
SEMA4D-220ENST00000492386 RPL24P83731 157 aaKnown RBP11.97□□□□□ -0.49
SEMA4D-220ENST00000492386 KLHL30-AS1Q8NEE0 82 aa11.97□□□□□ -0.49
SEMA4D-220ENST00000492386 NRGNQ92686 78 aa11.97□□□□□ -0.49
SEMA4D-220ENST00000492386 TIMM17AQ99595 171 aa11.97□□□□□ -0.49
SEMA4D-220ENST00000492386 CRYBG3Q68DQ2 2970 aa11.97□□□□□ -0.49
SEMA4D-220ENST00000492386 TMEM89A2RUT3 159 aa11.97□□□□□ -0.49
SEMA4D-220ENST00000492386 SCGB2A2Q13296 93 aa11.97□□□□□ -0.49
SEMA4D-220ENST00000492386 FAM74A4Q5TZK3 123 aa11.97□□□□□ -0.49
SEMA4D-220ENST00000492386 MORN3Q6PF18 240 aaPredicted RBP11.97□□□□□ -0.49
SEMA4D-220ENST00000492386 F8W1H4 67 aa11.96□□□□□ -0.49
SEMA4D-220ENST00000492386 H3BMG7 143 aa11.96□□□□□ -0.49
SEMA4D-220ENST00000492386 SNRPD3P62318 126 aaKnown RBP11.96□□□□□ -0.49
SEMA4D-220ENST00000492386 PAPPA-AS1Q5QFB9 102 aa11.96□□□□□ -0.49
SEMA4D-220ENST00000492386 Q8N1Y9 231 aa11.96□□□□□ -0.49
SEMA4D-220ENST00000492386 WFDC2Q14508 124 aa11.96□□□□□ -0.5
SEMA4D-220ENST00000492386 UTP20O75691 2785 aaKnown RBP11.95□□□□□ -0.5
SEMA4D-220ENST00000492386 M0QY20 66 aa11.95□□□□□ -0.5
SEMA4D-220ENST00000492386 AMTNQ6UX39 209 aa11.95□□□□□ -0.5
SEMA4D-220ENST00000492386 SCGB1D4Q6XE38 83 aa11.95□□□□□ -0.5
SEMA4D-220ENST00000492386 HOXA3O43365 443 aaPredicted RBP11.94□□□□□ -0.5
SEMA4D-220ENST00000492386 SPANXB1Q9NS25 103 aaPredicted RBP11.94□□□□□ -0.5
SEMA4D-220ENST00000492386 DSCR9P59020 149 aa11.94□□□□□ -0.5
SEMA4D-220ENST00000492386 SPINK13Q1W4C9 94 aa11.94□□□□□ -0.5
SEMA4D-220ENST00000492386 SYT8Q8NBV8 401 aa11.94□□□□□ -0.5
SEMA4D-220ENST00000492386 IGHV1OR15-1A0A075B7D0 117 aa11.93□□□□□ -0.5
SEMA4D-220ENST00000492386 SYNJ2BPP57105 145 aa11.93□□□□□ -0.5
SEMA4D-220ENST00000492386 HERVK_113P61574 105 aa11.93□□□□□ -0.5
SEMA4D-220ENST00000492386 ZNF56Q15929 161 aa11.93□□□□□ -0.5
SEMA4D-220ENST00000492386 ZNF876PQ49A33 203 aa11.93□□□□□ -0.5
SEMA4D-220ENST00000492386 ZNRF2Q8NHG8 242 aa11.93□□□□□ -0.5
SEMA4D-220ENST00000492386 ZNF256Q9Y2P7 627 aaPredicted RBP11.93□□□□□ -0.5
SEMA4D-220ENST00000492386 IGSF10Q6WRI0 2623 aa11.93□□□□□ -0.5
SEMA4D-220ENST00000492386 UBE2D1P51668 147 aa11.93□□□□□ -0.5
SEMA4D-220ENST00000492386 LINC01356Q8N9X3 169 aa11.93□□□□□ -0.5
SEMA4D-220ENST00000492386 PRO0461Q9UI25 63 aa11.93□□□□□ -0.5
SEMA4D-220ENST00000492386 A0A096LNT2 108 aa11.92□□□□□ -0.5
SEMA4D-220ENST00000492386 A0A0J9YY99 117 aa11.92□□□□□ -0.5
SEMA4D-220ENST00000492386 TSPEAR-AS2P59090 65 aa11.92□□□□□ -0.5
SEMA4D-220ENST00000492386 SRSF9Q13242 221 aaKnown RBP eCLIP11.92□□□□□ -0.5
SEMA4D-220ENST00000492386 PGPEP1Q9NXJ5 209 aa11.92□□□□□ -0.5
SEMA4D-220ENST00000492386 NSUN5P1Q3KNT7 163 aa11.92□□□□□ -0.5
SEMA4D-220ENST00000492386 PIEZO1Q92508 2521 aa11.92□□□□□ -0.5
SEMA4D-220ENST00000492386 TMEM238LA0A1B0GVL6 79 aa11.91□□□□□ -0.5
SEMA4D-220ENST00000492386 A6NJY4 79 aa11.91□□□□□ -0.5
SEMA4D-220ENST00000492386 SORL1Q92673 2214 aa11.9□□□□□ -0.5
SEMA4D-220ENST00000492386 P0DMU3 169 aa11.9□□□□□ -0.5
SEMA4D-220ENST00000492386 FAM231AP0DMU4 169 aa11.9□□□□□ -0.5
SEMA4D-220ENST00000492386 FAM231CP0DMU5 169 aa11.9□□□□□ -0.5
SEMA4D-220ENST00000492386 RHOHQ15669 191 aa11.9□□□□□ -0.5
SEMA4D-220ENST00000492386 GAGE13Q4V321 117 aa11.9□□□□□ -0.5
SEMA4D-220ENST00000492386 TMEM170BQ5T4T1 132 aa11.9□□□□□ -0.5
SEMA4D-220ENST00000492386 TRPT1Q86TN4 253 aaKnown RBP11.9□□□□□ -0.5
SEMA4D-220ENST00000492386 RNF152Q8N8N0 203 aa11.9□□□□□ -0.5
SEMA4D-220ENST00000492386 DUX5Q96PT3 197 aa11.9□□□□□ -0.5
SEMA4D-220ENST00000492386 DOPEY2Q9Y3R5 2298 aa11.9□□□□□ -0.5
SEMA4D-220ENST00000492386 AMELXQ99217 191 aa11.9□□□□□ -0.51
SEMA4D-220ENST00000492386 OPRPNQ99935 248 aaPredicted RBP11.9□□□□□ -0.51
SEMA4D-220ENST00000492386 MRPL16Q9NX20 251 aaKnown RBP11.9□□□□□ -0.51
SEMA4D-220ENST00000492386 HOXD3P31249 432 aaPredicted RBP11.89□□□□□ -0.51
SEMA4D-220ENST00000492386 SH2D6Q7Z4S9 175 aa11.89□□□□□ -0.51
SEMA4D-220ENST00000492386 MTURNQ8N3F0 131 aa11.89□□□□□ -0.51
SEMA4D-220ENST00000492386 ZANQ9Y493 2812 aa11.89□□□□□ -0.51
SEMA4D-220ENST00000492386 J3QLI3 93 aa11.89□□□□□ -0.51
SEMA4D-220ENST00000492386 ETDBQ3ZM63 59 aa11.89□□□□□ -0.51
SEMA4D-220ENST00000492386 NFE4Q86UQ8 179 aa11.89□□□□□ -0.51
SEMA4D-220ENST00000492386 VPREB3Q9UKI3 123 aa11.89□□□□□ -0.51
SEMA4D-220ENST00000492386 TSPAN13O95857 204 aa11.88□□□□□ -0.51
SEMA4D-220ENST00000492386 ELANEP08246 267 aa11.88□□□□□ -0.51
SEMA4D-220ENST00000492386 MAPK1IP1LQ8NDC0 245 aa11.88□□□□□ -0.51
SEMA4D-220ENST00000492386 ANKRD17O75179 2603 aaKnown RBP11.88□□□□□ -0.51
SEMA4D-220ENST00000492386 TGFAP01135 160 aa11.87□□□□□ -0.51
SEMA4D-220ENST00000492386 RBMY1A1P0DJD3 496 aaKnown RBP11.87□□□□□ -0.51
SEMA4D-220ENST00000492386 RBMY1CP0DJD4 496 aa11.87□□□□□ -0.51
SEMA4D-220ENST00000492386 RBMY1FQ15415 496 aaKnown RBP11.87□□□□□ -0.51
SEMA4D-220ENST00000492386 SLC25A29Q8N8R3 303 aa11.87□□□□□ -0.51
SEMA4D-220ENST00000492386 C20orf203Q8NBC4 194 aa11.87□□□□□ -0.51
SEMA4D-220ENST00000492386 ZNF702PQ9H963 129 aa11.87□□□□□ -0.51
SEMA4D-220ENST00000492386 USP9YO00507 2555 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms