RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 OR4C5Q8NGB2 326 aa13.21□□□□□ -0.29
MCF2L-230ENST00000491028 SMIM17P0DL12 118 aa13.2□□□□□ -0.3
MCF2L-230ENST00000491028 RASL11AQ6T310 242 aa13.2□□□□□ -0.3
MCF2L-230ENST00000491028 ZFP2Q6ZN57 461 aa13.2□□□□□ -0.3
MCF2L-230ENST00000491028 POM121L12Q8N7R1 296 aa13.2□□□□□ -0.3
MCF2L-230ENST00000491028 JPT2Q9H910 190 aa13.2□□□□□ -0.3
MCF2L-230ENST00000491028 NANOS2P60321 138 aaKnown RBP13.19□□□□□ -0.3
MCF2L-230ENST00000491028 ELOBQ15370 118 aa13.19□□□□□ -0.3
MCF2L-230ENST00000491028 CBLN2Q8IUK8 224 aa13.19□□□□□ -0.3
MCF2L-230ENST00000491028 TMEM191AQ9H0A3 160 aa13.19□□□□□ -0.3
MCF2L-230ENST00000491028 DPH3P1Q9H4G8 78 aa13.19□□□□□ -0.3
MCF2L-230ENST00000491028 NACAE9PAV3 2078 aa13.19□□□□□ -0.3
MCF2L-230ENST00000491028 CRYGDP07320 174 aa13.18□□□□□ -0.3
MCF2L-230ENST00000491028 TMEM88Q6PEY1 159 aa13.18□□□□□ -0.3
MCF2L-230ENST00000491028 Q6ZTC4 211 aa13.18□□□□□ -0.3
MCF2L-230ENST00000491028 C14orf178Q8N769 122 aaPredicted RBP13.18□□□□□ -0.3
MCF2L-230ENST00000491028 GATD1Q8NB37 220 aa13.18□□□□□ -0.3
MCF2L-230ENST00000491028 ZNF479Q96JC4 524 aa13.18□□□□□ -0.3
MCF2L-230ENST00000491028 KIF25-AS1Q9Y6Z4 181 aa13.18□□□□□ -0.3
MCF2L-230ENST00000491028 TRBV24-1A0A075B6N3 115 aa13.17□□□□□ -0.3
MCF2L-230ENST00000491028 A0A087WWL8 130 aa13.17□□□□□ -0.3
MCF2L-230ENST00000491028 EVI2AP22794 236 aa13.17□□□□□ -0.3
MCF2L-230ENST00000491028 CAMPP49913 170 aa13.17□□□□□ -0.3
MCF2L-230ENST00000491028 COX19Q49B96 90 aa13.17□□□□□ -0.3
MCF2L-230ENST00000491028 FAM74A4Q5TZK3 123 aa13.17□□□□□ -0.3
MCF2L-230ENST00000491028 UFSP1Q6NVU6 142 aa13.17□□□□□ -0.3
MCF2L-230ENST00000491028 YPEL4Q96NS1 127 aa13.17□□□□□ -0.3
MCF2L-230ENST00000491028 SAMD10Q9BYL1 202 aa13.17□□□□□ -0.3
MCF2L-230ENST00000491028 IGHV3-53P01767 116 aa13.16□□□□□ -0.3
MCF2L-230ENST00000491028 TRAV10A0A0B4J240 114 aa13.15□□□□□ -0.3
MCF2L-230ENST00000491028 STAB2Q8WWQ8 2551 aa13.15□□□□□ -0.3
MCF2L-230ENST00000491028 TGIF2-C20orf24A0A0A6YYL0 155 aa13.14□□□□□ -0.31
MCF2L-230ENST00000491028 TRGV4A0A0C4DH28 118 aa13.14□□□□□ -0.31
MCF2L-230ENST00000491028 SCO1O75880 301 aa13.14□□□□□ -0.31
MCF2L-230ENST00000491028 LINC00315P59091 139 aa13.14□□□□□ -0.31
MCF2L-230ENST00000491028 SLAQ13239 276 aa13.14□□□□□ -0.31
MCF2L-230ENST00000491028 FHL2Q14192 279 aa13.14□□□□□ -0.31
MCF2L-230ENST00000491028 ZNF56Q15929 161 aa13.14□□□□□ -0.31
MCF2L-230ENST00000491028 IGHV3-73A0A0B4J1V6 119 aa13.13□□□□□ -0.31
MCF2L-230ENST00000491028 MGPP08493 103 aa13.13□□□□□ -0.31
MCF2L-230ENST00000491028 GATA1P15976 413 aaPredicted RBP13.13□□□□□ -0.31
MCF2L-230ENST00000491028 RAB4BP61018 213 aa13.13□□□□□ -0.31
MCF2L-230ENST00000491028 FRZBQ92765 325 aa13.13□□□□□ -0.31
MCF2L-230ENST00000491028 DEFB131BA0A096LNP1 70 aa13.12□□□□□ -0.31
MCF2L-230ENST00000491028 F5H768 121 aa13.12□□□□□ -0.31
MCF2L-230ENST00000491028 HTN3P15516 51 aa13.12□□□□□ -0.31
MCF2L-230ENST00000491028 HOXA5P20719 270 aa13.12□□□□□ -0.31
MCF2L-230ENST00000491028 FAM210BQ96KR6 192 aa13.12□□□□□ -0.31
MCF2L-230ENST00000491028 PRO0255Q9UI72 69 aa13.12□□□□□ -0.31
MCF2L-230ENST00000491028 TRBV6-4A0A1B0GX49 114 aa13.11□□□□□ -0.31
MCF2L-230ENST00000491028 HLA-DQA1P01909 254 aa13.11□□□□□ -0.31
MCF2L-230ENST00000491028 MT-ND6P03923 174 aa13.11□□□□□ -0.31
MCF2L-230ENST00000491028 FAM104BQ5XKR9 115 aa13.11□□□□□ -0.31
MCF2L-230ENST00000491028 TMEM136Q6ZRR5 245 aa13.11□□□□□ -0.31
MCF2L-230ENST00000491028 AMN1Q8IY45 258 aa13.11□□□□□ -0.31
MCF2L-230ENST00000491028 GNB1LQ9BYB4 327 aa13.11□□□□□ -0.31
MCF2L-230ENST00000491028 F5H697 171 aa13.1□□□□□ -0.31
MCF2L-230ENST00000491028 RAB4AP20338 218 aa13.1□□□□□ -0.31
MCF2L-230ENST00000491028 PHLDA1Q8WV24 401 aaPredicted RBP13.1□□□□□ -0.31
MCF2L-230ENST00000491028 RNF185Q96GF1 192 aa13.1□□□□□ -0.31
MCF2L-230ENST00000491028 HHLA3Q9XRX5 114 aa13.1□□□□□ -0.31
MCF2L-230ENST00000491028 H7C1H1 209 aa13.09□□□□□ -0.31
MCF2L-230ENST00000491028 K7EQD1 137 aa13.09□□□□□ -0.31
MCF2L-230ENST00000491028 CRYBA4P53673 196 aa13.09□□□□□ -0.31
MCF2L-230ENST00000491028 RHOHQ15669 191 aa13.09□□□□□ -0.31
MCF2L-230ENST00000491028 SUMO4Q6EEV6 95 aa13.09□□□□□ -0.31
MCF2L-230ENST00000491028 MRAP2Q96G30 205 aa13.09□□□□□ -0.31
MCF2L-230ENST00000491028 WWC2-AS2Q96NR7 200 aa13.09□□□□□ -0.31
MCF2L-230ENST00000491028 SLC25A29Q8N8R3 303 aa13.08□□□□□ -0.32
MCF2L-230ENST00000491028 PRADC1Q9BSG0 188 aa13.08□□□□□ -0.32
MCF2L-230ENST00000491028 TRBV10-1A0A0K0K1A3 114 aa13.07□□□□□ -0.32
MCF2L-230ENST00000491028 COLCA2A8K830 154 aa13.07□□□□□ -0.32
MCF2L-230ENST00000491028 H3BNG1 76 aa13.07□□□□□ -0.32
MCF2L-230ENST00000491028 Q6ZSN1 163 aa13.07□□□□□ -0.32
MCF2L-230ENST00000491028 TRAV26-1A0A087WT03 109 aa13.06□□□□□ -0.32
MCF2L-230ENST00000491028 NUPR2A6NF83 97 aa13.06□□□□□ -0.32
MCF2L-230ENST00000491028 M0QY20 66 aa13.06□□□□□ -0.32
MCF2L-230ENST00000491028 PAX4O43316 350 aa13.06□□□□□ -0.32
MCF2L-230ENST00000491028 MRPL51Q4U2R6 128 aaKnown RBP13.06□□□□□ -0.32
MCF2L-230ENST00000491028 PPBPP02775 128 aa13.05□□□□□ -0.32
MCF2L-230ENST00000491028 TRAV26-2A0A0B4J265 109 aa13.04□□□□□ -0.32
MCF2L-230ENST00000491028 APCSP02743 223 aa13.04□□□□□ -0.32
MCF2L-230ENST00000491028 CEMP1Q6PRD7 247 aaPredicted RBP13.04□□□□□ -0.32
MCF2L-230ENST00000491028 VSIG2Q96IQ7 327 aa13.04□□□□□ -0.32
MCF2L-230ENST00000491028 MRPL18Q9H0U6 180 aaKnown RBP13.04□□□□□ -0.32
MCF2L-230ENST00000491028 TRAPPC1Q9Y5R8 145 aa13.04□□□□□ -0.32
MCF2L-230ENST00000491028 A0A0J9YY99 117 aa13.03□□□□□ -0.32
MCF2L-230ENST00000491028 PPP1R17O96001 155 aa13.03□□□□□ -0.32
MCF2L-230ENST00000491028 CKS2P33552 79 aa13.03□□□□□ -0.32
MCF2L-230ENST00000491028 ORMDL3Q8N138 153 aa13.03□□□□□ -0.32
MCF2L-230ENST00000491028 MUC7Q8TAX7 377 aa13.03□□□□□ -0.32
MCF2L-230ENST00000491028 DNAJC30Q96LL9 226 aa13.03□□□□□ -0.32
MCF2L-230ENST00000491028 D6R8Y8 96 aa13.02□□□□□ -0.33
MCF2L-230ENST00000491028 RAB5AP20339 215 aa13.02□□□□□ -0.33
MCF2L-230ENST00000491028 RPL36AP83881 106 aaKnown RBP13.02□□□□□ -0.33
MCF2L-230ENST00000491028 C15orf53Q8NAA6 179 aa13.02□□□□□ -0.33
MCF2L-230ENST00000491028 RPL36ALQ969Q0 106 aaKnown RBP13.02□□□□□ -0.33
MCF2L-230ENST00000491028 NIT2Q9NQR4 276 aa13.02□□□□□ -0.33
MCF2L-230ENST00000491028 KLK5Q9Y337 293 aaPredicted RBP13.02□□□□□ -0.33
MCF2L-230ENST00000491028 NCR2O95944 276 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms