RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 P0DMU3 169 aa11.05□□□□□ -0.64
TRA2A-208ENST00000490942 FAM231AP0DMU4 169 aa11.05□□□□□ -0.64
TRA2A-208ENST00000490942 FAM231CP0DMU5 169 aa11.05□□□□□ -0.64
TRA2A-208ENST00000490942 RHOHQ15669 191 aa11.05□□□□□ -0.64
TRA2A-208ENST00000490942 C10orf91Q5T1B1 145 aa11.05□□□□□ -0.64
TRA2A-208ENST00000490942 ANAPC16Q96DE5 110 aa11.05□□□□□ -0.64
TRA2A-208ENST00000490942 HIGD1CA8MV81 97 aa11.04□□□□□ -0.64
TRA2A-208ENST00000490942 MT-ND4LP03901 98 aa11.04□□□□□ -0.64
TRA2A-208ENST00000490942 ADCYAP1P18509 176 aa11.04□□□□□ -0.64
TRA2A-208ENST00000490942 MRPL23Q16540 153 aaKnown RBP11.04□□□□□ -0.64
TRA2A-208ENST00000490942 SH2D6Q7Z4S9 175 aa11.04□□□□□ -0.64
TRA2A-208ENST00000490942 BORCS7Q96B45 105 aa11.04□□□□□ -0.64
TRA2A-208ENST00000490942 PRADC1Q9BSG0 188 aa11.04□□□□□ -0.64
TRA2A-208ENST00000490942 SAMD10Q9BYL1 202 aa11.04□□□□□ -0.64
TRA2A-208ENST00000490942 JPT2Q9H910 190 aa11.04□□□□□ -0.64
TRA2A-208ENST00000490942 NAT8BQ9UHF3 227 aa11.04□□□□□ -0.64
TRA2A-208ENST00000490942 ICOSQ9Y6W8 199 aa11.04□□□□□ -0.64
TRA2A-208ENST00000490942 TENM2Q9NT68 2774 aa11.04□□□□□ -0.64
TRA2A-208ENST00000490942 A0A0J9YY99 117 aa11.03□□□□□ -0.64
TRA2A-208ENST00000490942 LCE6AA0A183 80 aa11.03□□□□□ -0.64
TRA2A-208ENST00000490942 SMIM27A0A1W2PRY6 76 aa11.03□□□□□ -0.64
TRA2A-208ENST00000490942 SMIM17P0DL12 118 aa11.03□□□□□ -0.64
TRA2A-208ENST00000490942 NTF3P20783 257 aa11.03□□□□□ -0.64
TRA2A-208ENST00000490942 FAM3BP58499 235 aaPredicted RBP11.03□□□□□ -0.64
TRA2A-208ENST00000490942 RAB4BP61018 213 aa11.03□□□□□ -0.64
TRA2A-208ENST00000490942 RNF212Q495C1 297 aa11.03□□□□□ -0.64
TRA2A-208ENST00000490942 SLC25A29Q8N8R3 303 aa11.03□□□□□ -0.64
TRA2A-208ENST00000490942 LINC00476Q8WZB0 136 aa11.03□□□□□ -0.64
TRA2A-208ENST00000490942 CARHSP1Q9Y2V2 147 aaKnown RBP11.03□□□□□ -0.64
TRA2A-208ENST00000490942 KIF25-AS1Q9Y6Z4 181 aa11.03□□□□□ -0.64
TRA2A-208ENST00000490942 NACAE9PAV3 2078 aa11.03□□□□□ -0.64
TRA2A-208ENST00000490942 PLECQ15149 4684 aaKnown RBP11.02□□□□□ -0.65
TRA2A-208ENST00000490942 TRBV10-1A0A0K0K1A3 114 aa11.02□□□□□ -0.65
TRA2A-208ENST00000490942 A0A1B0GUT8 65 aa11.02□□□□□ -0.65
TRA2A-208ENST00000490942 FAM74A4Q5TZK3 123 aa11.02□□□□□ -0.65
TRA2A-208ENST00000490942 A0A087WWL8 130 aa11.01□□□□□ -0.65
TRA2A-208ENST00000490942 A0A096LPF7 62 aa11.01□□□□□ -0.65
TRA2A-208ENST00000490942 MUC21A0A0G2JKD1 596 aa11.01□□□□□ -0.65
TRA2A-208ENST00000490942 MUC21A0A140T8X8 626 aa11.01□□□□□ -0.65
TRA2A-208ENST00000490942 K7EQD1 137 aa11.01□□□□□ -0.65
TRA2A-208ENST00000490942 NUDT3O95989 172 aa11.01□□□□□ -0.65
TRA2A-208ENST00000490942 TWIST1Q15672 202 aa11.01□□□□□ -0.65
TRA2A-208ENST00000490942 SMIM15Q7Z3B0 74 aa11.01□□□□□ -0.65
TRA2A-208ENST00000490942 C14orf178Q8N769 122 aaPredicted RBP11.01□□□□□ -0.65
TRA2A-208ENST00000490942 PGLYRP4Q96LB8 373 aa11.01□□□□□ -0.65
TRA2A-208ENST00000490942 IGHV3-73A0A0B4J1V6 119 aa11□□□□□ -0.65
TRA2A-208ENST00000490942 A0A1B0GW15 77 aa11□□□□□ -0.65
TRA2A-208ENST00000490942 GYPEP15421 78 aa11□□□□□ -0.65
TRA2A-208ENST00000490942 SRIP30626 198 aa11□□□□□ -0.65
TRA2A-208ENST00000490942 CCL18P55774 89 aa11□□□□□ -0.65
TRA2A-208ENST00000490942 LINC00315P59091 139 aa11□□□□□ -0.65
TRA2A-208ENST00000490942 NEGR1Q7Z3B1 354 aa11□□□□□ -0.65
TRA2A-208ENST00000490942 NUP35Q8NFH5 326 aa11□□□□□ -0.65
TRA2A-208ENST00000490942 FRZBQ92765 325 aa11□□□□□ -0.65
TRA2A-208ENST00000490942 CTDSP1Q9GZU7 261 aa11□□□□□ -0.65
TRA2A-208ENST00000490942 DPH3P1Q9H4G8 78 aa11□□□□□ -0.65
TRA2A-208ENST00000490942 MSRB1Q9NZV6 116 aa11□□□□□ -0.65
TRA2A-208ENST00000490942 EVI2AP22794 236 aa10.99□□□□□ -0.65
TRA2A-208ENST00000490942 TIRAPP58753 221 aa10.99□□□□□ -0.65
TRA2A-208ENST00000490942 RIGQ13278 110 aa10.99□□□□□ -0.65
TRA2A-208ENST00000490942 Q6ZSN1 163 aa10.99□□□□□ -0.65
TRA2A-208ENST00000490942 IMMP2LQ96T52 175 aa10.99□□□□□ -0.65
TRA2A-208ENST00000490942 H7C1H1 209 aa10.98□□□□□ -0.65
TRA2A-208ENST00000490942 NDUFA5Q16718 116 aa10.98□□□□□ -0.65
TRA2A-208ENST00000490942 TMEM242Q9NWH2 141 aa10.98□□□□□ -0.65
TRA2A-208ENST00000490942 LINC00694P0DN24 101 aa10.97□□□□□ -0.65
TRA2A-208ENST00000490942 SSTP61278 116 aa10.97□□□□□ -0.65
TRA2A-208ENST00000490942 ZNF56Q15929 161 aa10.97□□□□□ -0.65
TRA2A-208ENST00000490942 TMEM191AQ9H0A3 160 aa10.97□□□□□ -0.65
TRA2A-208ENST00000490942 S100A8P05109 93 aa10.96□□□□□ -0.65
TRA2A-208ENST00000490942 RHEBQ15382 184 aa10.96□□□□□ -0.65
TRA2A-208ENST00000490942 ATP5L2Q7Z4Y8 100 aa10.96□□□□□ -0.65
TRA2A-208ENST00000490942 UPK3BQ9BT76 320 aa10.96□□□□□ -0.65
TRA2A-208ENST00000490942 A0A087WWC5 75 aa10.95□□□□□ -0.66
TRA2A-208ENST00000490942 F5H697 171 aa10.95□□□□□ -0.66
TRA2A-208ENST00000490942 LY6G6CO95867 125 aa10.95□□□□□ -0.66
TRA2A-208ENST00000490942 RPL36AP83881 106 aaKnown RBP10.95□□□□□ -0.66
TRA2A-208ENST00000490942 UBE2DNLQ8IWF7 75 aa10.95□□□□□ -0.66
TRA2A-208ENST00000490942 RPL36ALQ969Q0 106 aaKnown RBP10.95□□□□□ -0.66
TRA2A-208ENST00000490942 DNAJC30Q96LL9 226 aa10.95□□□□□ -0.66
TRA2A-208ENST00000490942 TRBV7-3A0A075B6L6 115 aa10.94□□□□□ -0.66
TRA2A-208ENST00000490942 M0QY20 66 aa10.94□□□□□ -0.66
TRA2A-208ENST00000490942 ESRGQ1W209 222 aa10.94□□□□□ -0.66
TRA2A-208ENST00000490942 LYPD5Q6UWN5 251 aa10.94□□□□□ -0.66
TRA2A-208ENST00000490942 SVBPQ8N300 66 aa10.94□□□□□ -0.66
TRA2A-208ENST00000490942 MRPS16Q9Y3D3 137 aaKnown RBP10.94□□□□□ -0.66
TRA2A-208ENST00000490942 LINC00588Q9Y4M8 146 aa10.94□□□□□ -0.66
TRA2A-208ENST00000490942 ALMS1Q8TCU4 4167 aa10.93□□□□□ -0.66
TRA2A-208ENST00000490942 TRAV9-1A0A075B6T8 112 aa10.93□□□□□ -0.66
TRA2A-208ENST00000490942 LOC100131303A0A0U1RQF7 123 aa10.93□□□□□ -0.66
TRA2A-208ENST00000490942 MGPP08493 103 aa10.93□□□□□ -0.66
TRA2A-208ENST00000490942 SUMO4Q6EEV6 95 aa10.93□□□□□ -0.66
TRA2A-208ENST00000490942 GATD1Q8NB37 220 aa10.93□□□□□ -0.66
TRA2A-208ENST00000490942 CLRN3Q8NCR9 226 aa10.93□□□□□ -0.66
TRA2A-208ENST00000490942 ATP6V0E2Q8NHE4 81 aa10.93□□□□□ -0.66
TRA2A-208ENST00000490942 A0A1B0GXF2 115 aa10.92□□□□□ -0.66
TRA2A-208ENST00000490942 C7orf77A4D0Y5 90 aa10.92□□□□□ -0.66
TRA2A-208ENST00000490942 SNAPINO95295 136 aa10.92□□□□□ -0.66
TRA2A-208ENST00000490942 HBBP68871 147 aa10.92□□□□□ -0.66
TRA2A-208ENST00000490942 KCNIP4Q6PIL6 250 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms