RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 H3BVH4 76 aa10.22□□□□□ -0.77
USP48-210ENST00000489108 K7EQM0 130 aa10.22□□□□□ -0.77
USP48-210ENST00000489108 KRTAP10-8P60410 259 aa10.22□□□□□ -0.77
USP48-210ENST00000489108 RPL36AP83881 106 aaKnown RBP10.22□□□□□ -0.77
USP48-210ENST00000489108 C5orf17Q8NAS9 161 aa10.22□□□□□ -0.77
USP48-210ENST00000489108 RPL36ALQ969Q0 106 aaKnown RBP10.22□□□□□ -0.77
USP48-210ENST00000489108 TRBV7-3A0A075B6L6 115 aa10.21□□□□□ -0.77
USP48-210ENST00000489108 TRBV10-1A0A0K0K1A3 114 aa10.21□□□□□ -0.77
USP48-210ENST00000489108 CLRN3Q8NCR9 226 aa10.21□□□□□ -0.77
USP48-210ENST00000489108 RNF185Q96GF1 192 aa10.21□□□□□ -0.77
USP48-210ENST00000489108 SFRP2Q96HF1 295 aa10.21□□□□□ -0.77
USP48-210ENST00000489108 KIF25-AS1Q9Y6Z4 181 aa10.21□□□□□ -0.77
USP48-210ENST00000489108 A0A0J9YXV3 536 aa10.2□□□□□ -0.78
USP48-210ENST00000489108 FABP5P3A8MUU1 101 aa10.2□□□□□ -0.78
USP48-210ENST00000489108 ARMS2P0C7Q2 107 aa10.2□□□□□ -0.78
USP48-210ENST00000489108 RAB2AP61019 212 aa10.2□□□□□ -0.78
USP48-210ENST00000489108 SAPCD1Q5SSQ6 148 aa10.2□□□□□ -0.78
USP48-210ENST00000489108 CLPSL2Q6UWE3 100 aa10.2□□□□□ -0.78
USP48-210ENST00000489108 SMIM3Q9BZL3 60 aa10.2□□□□□ -0.78
USP48-210ENST00000489108 LPAP08519 4548 aa10.2□□□□□ -0.78
USP48-210ENST00000489108 ARL14EPLP0DKL9 152 aa10.19□□□□□ -0.78
USP48-210ENST00000489108 CNBPP62633 177 aaKnown RBP10.19□□□□□ -0.78
USP48-210ENST00000489108 SUMO1P63165 101 aaKnown RBP10.19□□□□□ -0.78
USP48-210ENST00000489108 OR11H4Q8NGC9 324 aa10.19□□□□□ -0.78
USP48-210ENST00000489108 SPACA4Q8TDM5 124 aa10.19□□□□□ -0.78
USP48-210ENST00000489108 C7orf33Q8WU49 177 aa10.19□□□□□ -0.78
USP48-210ENST00000489108 CHCHD5Q9BSY4 110 aa10.19□□□□□ -0.78
USP48-210ENST00000489108 EPDR1Q9UM22 224 aa10.19□□□□□ -0.78
USP48-210ENST00000489108 IGHV3-64A0A075B6Q5 118 aa10.18□□□□□ -0.78
USP48-210ENST00000489108 hDV102S1A0JD36 115 aa10.18□□□□□ -0.78
USP48-210ENST00000489108 B4DEV8 164 aa10.18□□□□□ -0.78
USP48-210ENST00000489108 SLPIP03973 132 aa10.18□□□□□ -0.78
USP48-210ENST00000489108 WDR73Q6P4I2 378 aa10.18□□□□□ -0.78
USP48-210ENST00000489108 LINC00269Q8N2A0 174 aa10.18□□□□□ -0.78
USP48-210ENST00000489108 PRR34Q9NV39 138 aa10.18□□□□□ -0.78
USP48-210ENST00000489108 PLAC8Q9NZF1 115 aa10.18□□□□□ -0.78
USP48-210ENST00000489108 HSPB11Q9Y547 144 aa10.18□□□□□ -0.78
USP48-210ENST00000489108 TRAV34A0A0B4J273 112 aa10.17□□□□□ -0.78
USP48-210ENST00000489108 GRIFINA4D1Z8 144 aa10.17□□□□□ -0.78
USP48-210ENST00000489108 PTTG1O95997 202 aa10.17□□□□□ -0.78
USP48-210ENST00000489108 DNLZQ5SXM8 178 aa10.17□□□□□ -0.78
USP48-210ENST00000489108 OR10G8Q8NGN5 311 aa10.17□□□□□ -0.78
USP48-210ENST00000489108 RBM38Q9H0Z9 239 aaKnown RBP10.17□□□□□ -0.78
USP48-210ENST00000489108 KRBOX1C9JBD0 128 aa10.16□□□□□ -0.78
USP48-210ENST00000489108 M0R036 132 aa10.16□□□□□ -0.78
USP48-210ENST00000489108 M0R381 172 aa10.16□□□□□ -0.78
USP48-210ENST00000489108 SUN5Q8TC36 379 aa10.16□□□□□ -0.78
USP48-210ENST00000489108 GTSF1Q8WW33 167 aa10.16□□□□□ -0.78
USP48-210ENST00000489108 WFDC1Q9HC57 220 aa10.16□□□□□ -0.78
USP48-210ENST00000489108 PHLDA3Q9Y5J5 127 aa10.16□□□□□ -0.78
USP48-210ENST00000489108 GCHFRP30047 84 aa10.15□□□□□ -0.78
USP48-210ENST00000489108 CRIP1P50238 77 aa10.15□□□□□ -0.78
USP48-210ENST00000489108 RBX1P62877 108 aa10.15□□□□□ -0.78
USP48-210ENST00000489108 NEXN-AS1Q8NBZ9 246 aa10.15□□□□□ -0.78
USP48-210ENST00000489108 KRTAP9-2Q9BYQ4 174 aa10.15□□□□□ -0.78
USP48-210ENST00000489108 ARL2-SNX15V9GYD0 113 aa10.15□□□□□ -0.78
USP48-210ENST00000489108 IGLV10-54A0A075B6I4 117 aa10.14□□□□□ -0.79
USP48-210ENST00000489108 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.14□□□□□ -0.79
USP48-210ENST00000489108 STAG3L2P0CL84 134 aa10.14□□□□□ -0.79
USP48-210ENST00000489108 STAG3L3P0CL85 134 aa10.14□□□□□ -0.79
USP48-210ENST00000489108 PKIAP61925 76 aa10.14□□□□□ -0.79
USP48-210ENST00000489108 PRR3P79522 188 aaKnown RBP10.14□□□□□ -0.79
USP48-210ENST00000489108 GAGE6Q13070 117 aa10.14□□□□□ -0.79
USP48-210ENST00000489108 NTM-AS1Q6ZSK4 140 aa10.14□□□□□ -0.79
USP48-210ENST00000489108 AP5S1Q9NUS5 200 aa10.14□□□□□ -0.79
USP48-210ENST00000489108 FAM240BA0A1B0GVZ2 78 aa10.13□□□□□ -0.79
USP48-210ENST00000489108 TPT1P13693 172 aaKnown RBP10.13□□□□□ -0.79
USP48-210ENST00000489108 RPL12P30050 165 aaKnown RBP10.13□□□□□ -0.79
USP48-210ENST00000489108 CDC34P49427 236 aaPredicted RBP10.13□□□□□ -0.79
USP48-210ENST00000489108 CYCSP99999 105 aaKnown RBP10.13□□□□□ -0.79
USP48-210ENST00000489108 PPP1R1CQ8WVI7 109 aa10.13□□□□□ -0.79
USP48-210ENST00000489108 RAB24Q969Q5 203 aa10.12□□□□□ -0.79
USP48-210ENST00000489108 TMSB15BA0A087X1C1 80 aa10.11□□□□□ -0.79
USP48-210ENST00000489108 RAB4BP61018 213 aa10.11□□□□□ -0.79
USP48-210ENST00000489108 COX6A2Q02221 97 aa10.11□□□□□ -0.79
USP48-210ENST00000489108 PRR27Q6MZM9 219 aa10.11□□□□□ -0.79
USP48-210ENST00000489108 REG3GQ6UW15 175 aa10.11□□□□□ -0.79
USP48-210ENST00000489108 ZFP82Q8N141 532 aa10.11□□□□□ -0.79
USP48-210ENST00000489108 LYPD6BQ8NI32 183 aa10.11□□□□□ -0.79
USP48-210ENST00000489108 MUC21A0A0G2JKD1 596 aa10.1□□□□□ -0.79
USP48-210ENST00000489108 SH2D1AO60880 128 aa10.1□□□□□ -0.79
USP48-210ENST00000489108 RAB5CP51148 216 aa10.1□□□□□ -0.79
USP48-210ENST00000489108 H2BFSP57053 126 aa10.1□□□□□ -0.79
USP48-210ENST00000489108 REG3AQ06141 175 aa10.1□□□□□ -0.79
USP48-210ENST00000489108 MAJINQ3KP22 176 aa10.1□□□□□ -0.79
USP48-210ENST00000489108 LCE2DQ5TA82 110 aaPredicted RBP10.1□□□□□ -0.79
USP48-210ENST00000489108 SPINK6Q6UWN8 80 aa10.1□□□□□ -0.79
USP48-210ENST00000489108 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.1□□□□□ -0.79
USP48-210ENST00000489108 MPC2O95563 127 aa10.09□□□□□ -0.79
USP48-210ENST00000489108 ZNF56Q15929 161 aa10.09□□□□□ -0.79
USP48-210ENST00000489108 TMEM167BQ9NRX6 74 aa10.09□□□□□ -0.79
USP48-210ENST00000489108 TMEM97Q5BJF2 176 aa10.08□□□□□ -0.8
USP48-210ENST00000489108 Q86TA4 180 aa10.08□□□□□ -0.8
USP48-210ENST00000489108 PRSS3P2Q8NHM4 247 aa10.08□□□□□ -0.8
USP48-210ENST00000489108 DERL1Q9BUN8 251 aa10.08□□□□□ -0.8
USP48-210ENST00000489108 TRAV8-4A0A0B4J246 113 aa10.07□□□□□ -0.8
USP48-210ENST00000489108 IGKV2-24A0A0C4DH68 120 aa10.07□□□□□ -0.8
USP48-210ENST00000489108 TRBV6-1A0A0K0K1D8 114 aa10.07□□□□□ -0.8
USP48-210ENST00000489108 CXorf1O96002 111 aa10.07□□□□□ -0.8
USP48-210ENST00000489108 IFNA7P01567 189 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms