RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 ARHGAP31Q2M1Z3 1444 aa-0.75□□□□□ -2.53
CCDC93-209ENST00000488908 APOBP04114 4563 aaKnown RBP-0.75□□□□□ -2.53
CCDC93-209ENST00000488908 BIVM-ERCC5R4GMW8 1640 aa-0.75□□□□□ -2.53
CCDC93-209ENST00000488908 ANKRD31Q8N7Z5 1873 aa-0.75□□□□□ -2.53
CCDC93-209ENST00000488908 DOCK11Q5JSL3 2073 aa-0.76□□□□□ -2.53
CCDC93-209ENST00000488908 TLN1Q9Y490 2541 aaKnown RBP-0.76□□□□□ -2.53
CCDC93-209ENST00000488908 PKD1P98161 4303 aa-0.76□□□□□ -2.53
CCDC93-209ENST00000488908 DYNC1H1Q14204 4646 aaKnown RBP-0.76□□□□□ -2.53
CCDC93-209ENST00000488908 LRBAP50851 2863 aa-0.76□□□□□ -2.53
CCDC93-209ENST00000488908 ATMQ13315 3056 aa-0.76□□□□□ -2.53
CCDC93-209ENST00000488908 PRUNE2Q8WUY3 3088 aa-0.76□□□□□ -2.53
CCDC93-209ENST00000488908 A0A0D9SFI3 127 aa-0.76□□□□□ -2.53
CCDC93-209ENST00000488908 TRBV27A0A0K0K1C4 114 aa-0.76□□□□□ -2.53
CCDC93-209ENST00000488908 IFNA1P01562 189 aa-0.76□□□□□ -2.53
CCDC93-209ENST00000488908 CSN2P05814 226 aa-0.76□□□□□ -2.53
CCDC93-209ENST00000488908 COX4I1P13073 169 aa-0.76□□□□□ -2.53
CCDC93-209ENST00000488908 SDC2P34741 201 aa-0.76□□□□□ -2.53
CCDC93-209ENST00000488908 REEP5Q00765 189 aa-0.76□□□□□ -2.53
CCDC93-209ENST00000488908 LTC4SQ16873 150 aa-0.76□□□□□ -2.53
CCDC93-209ENST00000488908 DEFB112Q30KQ8 113 aa-0.76□□□□□ -2.53
CCDC93-209ENST00000488908 KRTAP20-1Q3LI63 56 aa-0.76□□□□□ -2.53
CCDC93-209ENST00000488908 Q5VSD8 79 aa-0.76□□□□□ -2.53
CCDC93-209ENST00000488908 GINS3Q9BRX5 216 aa-0.76□□□□□ -2.53
CCDC93-209ENST00000488908 C5orf42Q9H799 3197 aa-0.77□□□□□ -2.53
CCDC93-209ENST00000488908 CAMSAP1Q5T5Y3 1602 aa-0.77□□□□□ -2.53
CCDC93-209ENST00000488908 TCOF1Q13428 1488 aaKnown RBP-0.77□□□□□ -2.53
CCDC93-209ENST00000488908 TRDV1A0A1B0GX56 115 aa-0.77□□□□□ -2.53
CCDC93-209ENST00000488908 SLC25A4P12235 298 aa-0.77□□□□□ -2.53
CCDC93-209ENST00000488908 CKS2P33552 79 aa-0.77□□□□□ -2.53
CCDC93-209ENST00000488908 SPRR1AP35321 89 aa-0.77□□□□□ -2.53
CCDC93-209ENST00000488908 BLCAPP62952 87 aa-0.77□□□□□ -2.53
CCDC93-209ENST00000488908 MRPS25P82663 173 aaKnown RBP-0.77□□□□□ -2.53
CCDC93-209ENST00000488908 DHRS4L2Q6PKH6 230 aa-0.77□□□□□ -2.53
CCDC93-209ENST00000488908 LINC00305Q7Z4B0 112 aa-0.77□□□□□ -2.53
CCDC93-209ENST00000488908 MORN4Q8NDC4 146 aa-0.77□□□□□ -2.53
CCDC93-209ENST00000488908 PPDPFLQ8WWR9 84 aa-0.77□□□□□ -2.53
CCDC93-209ENST00000488908 CEP19Q96LK0 163 aa-0.77□□□□□ -2.53
CCDC93-209ENST00000488908 CARD19Q96LW7 228 aa-0.77□□□□□ -2.53
CCDC93-209ENST00000488908 CNFNQ9BYD5 112 aa-0.77□□□□□ -2.53
CCDC93-209ENST00000488908 MED11Q9P086 117 aa-0.77□□□□□ -2.53
CCDC93-209ENST00000488908 PRKDCP78527 4128 aaKnown RBP-0.77□□□□□ -2.53
CCDC93-209ENST00000488908 SSC5DA1L4H1 1573 aa-0.78□□□□□ -2.53
CCDC93-209ENST00000488908 MYO9AB2RTY4 2548 aa-0.78□□□□□ -2.53
CCDC93-209ENST00000488908 PTPRGP23470 1445 aa-0.78□□□□□ -2.53
CCDC93-209ENST00000488908 IGHV1-24A0A0C4DH33 117 aa-0.78□□□□□ -2.53
CCDC93-209ENST00000488908 TMEM210A6NLX4 147 aa-0.78□□□□□ -2.53
CCDC93-209ENST00000488908 ADCYAP1P18509 176 aa-0.78□□□□□ -2.53
CCDC93-209ENST00000488908 TAS2R41P59536 307 aa-0.78□□□□□ -2.53
CCDC93-209ENST00000488908 MT1HP80294 61 aa-0.78□□□□□ -2.53
CCDC93-209ENST00000488908 UBE2DNLQ8IWF7 75 aa-0.78□□□□□ -2.53
CCDC93-209ENST00000488908 OR4S1Q8NGB4 309 aa-0.78□□□□□ -2.53
CCDC93-209ENST00000488908 OR51A4Q8NGJ6 313 aa-0.78□□□□□ -2.53
CCDC93-209ENST00000488908 DGCR14Q96DF8 476 aaKnown RBP-0.78□□□□□ -2.53
CCDC93-209ENST00000488908 LXNQ9BS40 222 aa-0.78□□□□□ -2.53
CCDC93-209ENST00000488908 SS18L2Q9UHA2 77 aa-0.78□□□□□ -2.53
CCDC93-209ENST00000488908 PRO0255Q9UI72 69 aa-0.78□□□□□ -2.53
CCDC93-209ENST00000488908 LAMTOR2Q9Y2Q5 125 aa-0.78□□□□□ -2.53
CCDC93-209ENST00000488908 NUP210Q8TEM1 1887 aaPredicted RBP-0.78□□□□□ -2.53
CCDC93-209ENST00000488908 SACSQ9NZJ4 4579 aa-0.78□□□□□ -2.53
CCDC93-209ENST00000488908 DNAH1Q9P2D7 4330 aa-0.78□□□□□ -2.53
CCDC93-209ENST00000488908 MYH9P35579 1960 aaKnown RBP-0.79□□□□□ -2.54
CCDC93-209ENST00000488908 TLN2Q9Y4G6 2542 aa-0.79□□□□□ -2.54
CCDC93-209ENST00000488908 MYH1P12882 1939 aa-0.79□□□□□ -2.54
CCDC93-209ENST00000488908 A0A087WTM6 91 aa-0.79□□□□□ -2.54
CCDC93-209ENST00000488908 TRAV13-1A0A0B4J241 112 aa-0.79□□□□□ -2.54
CCDC93-209ENST00000488908 ZNF815PA8K554 130 aa-0.79□□□□□ -2.54
CCDC93-209ENST00000488908 H3BMG7 143 aa-0.79□□□□□ -2.54
CCDC93-209ENST00000488908 GABARAPH6UMI1 98 aa-0.79□□□□□ -2.54
CCDC93-209ENST00000488908 MFSD11O43934 449 aa-0.79□□□□□ -2.54
CCDC93-209ENST00000488908 SPINK8P0C7L1 97 aa-0.79□□□□□ -2.54
CCDC93-209ENST00000488908 GCHFRP30047 84 aa-0.79□□□□□ -2.54
CCDC93-209ENST00000488908 FADDQ13158 208 aa-0.79□□□□□ -2.54
CCDC93-209ENST00000488908 Q6ZRX8 168 aa-0.79□□□□□ -2.54
CCDC93-209ENST00000488908 SSBP3-AS1Q7Z2R9 100 aa-0.79□□□□□ -2.54
CCDC93-209ENST00000488908 FAM24BQ8N5W8 94 aa-0.79□□□□□ -2.54
CCDC93-209ENST00000488908 LAMB1P07942 1786 aa-0.79□□□□□ -2.54
CCDC93-209ENST00000488908 TECPR2O15040 1411 aa-0.8□□□□□ -2.54
CCDC93-209ENST00000488908 FAM135BQ49AJ0 1406 aa-0.8□□□□□ -2.54
CCDC93-209ENST00000488908 KIDINS220Q9ULH0 1771 aa-0.8□□□□□ -2.54
CCDC93-209ENST00000488908 TRBV7-1A0A0A6YYK4 115 aa-0.8□□□□□ -2.54
CCDC93-209ENST00000488908 CXorf51AA0A1B0GTR3 108 aa-0.8□□□□□ -2.54
CCDC93-209ENST00000488908 PNMA8CA0A1B0GUJ8 204 aa-0.8□□□□□ -2.54
CCDC93-209ENST00000488908 TCRBV3S1A0A5B6 114 aa-0.8□□□□□ -2.54
CCDC93-209ENST00000488908 K7EP34 96 aa-0.8□□□□□ -2.54
CCDC93-209ENST00000488908 MT1AP04731 61 aa-0.8□□□□□ -2.54
CCDC93-209ENST00000488908 HSD11B1P28845 292 aa-0.8□□□□□ -2.54
CCDC93-209ENST00000488908 TCTAP57738 103 aa-0.8□□□□□ -2.54
CCDC93-209ENST00000488908 SSBP1Q04837 148 aaKnown RBP-0.8□□□□□ -2.54
CCDC93-209ENST00000488908 INSL4Q14641 139 aa-0.8□□□□□ -2.54
CCDC93-209ENST00000488908 NDUFA11Q86Y39 141 aa-0.8□□□□□ -2.54
CCDC93-209ENST00000488908 OTOSQ8NHW6 89 aa-0.8□□□□□ -2.54
CCDC93-209ENST00000488908 DYDC1Q8WWB3 177 aa-0.8□□□□□ -2.54
CCDC93-209ENST00000488908 SCP2D1Q9UJQ7 156 aa-0.8□□□□□ -2.54
CCDC93-209ENST00000488908 DNAH9Q9NYC9 4486 aa-0.8□□□□□ -2.54
CCDC93-209ENST00000488908 CEP290O15078 2479 aa-0.8□□□□□ -2.54
CCDC93-209ENST00000488908 CMYA5Q8N3K9 4069 aa-0.8□□□□□ -2.54
CCDC93-209ENST00000488908 SMG1Q96Q15 3661 aaKnown RBP-0.8□□□□□ -2.54
CCDC93-209ENST00000488908 YTHDC2Q9H6S0 1430 aaKnown RBP-0.81□□□□□ -2.54
CCDC93-209ENST00000488908 DNAH11Q96DT5 4516 aa-0.81□□□□□ -2.54
CCDC93-209ENST00000488908 PDE4DIPQ5VU43 2346 aa-0.81□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms