RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 IL36BQ9NZH7 164 aa4.82□□□□□ -1.64
PDPN-205ENST00000487038 Q9UF83 564 aa4.82□□□□□ -1.64
PDPN-205ENST00000487038 A0A087WWL8 130 aa4.81□□□□□ -1.64
PDPN-205ENST00000487038 PTTG1O95997 202 aa4.81□□□□□ -1.64
PDPN-205ENST00000487038 TCRBP04435 133 aa4.81□□□□□ -1.64
PDPN-205ENST00000487038 NHLH2Q02577 135 aa4.81□□□□□ -1.64
PDPN-205ENST00000487038 TMEM97Q5BJF2 176 aa4.81□□□□□ -1.64
PDPN-205ENST00000487038 CLPSL2Q6UWE3 100 aa4.81□□□□□ -1.64
PDPN-205ENST00000487038 C5orf17Q8NAS9 161 aa4.81□□□□□ -1.64
PDPN-205ENST00000487038 SGK494Q96LW2 274 aa4.81□□□□□ -1.64
PDPN-205ENST00000487038 PRR34Q9NV39 138 aa4.81□□□□□ -1.64
PDPN-205ENST00000487038 A0A1W2PPV4 95 aa4.8□□□□□ -1.64
PDPN-205ENST00000487038 H3BMQ9 156 aa4.8□□□□□ -1.64
PDPN-205ENST00000487038 H3BVH4 76 aa4.8□□□□□ -1.64
PDPN-205ENST00000487038 TCRAP04437 139 aa4.8□□□□□ -1.64
PDPN-205ENST00000487038 FLI1Q01543 452 aaPredicted RBP4.8□□□□□ -1.64
PDPN-205ENST00000487038 SAPCD1Q5SSQ6 148 aa4.8□□□□□ -1.64
PDPN-205ENST00000487038 PRNTQ86SH4 94 aa4.8□□□□□ -1.64
PDPN-205ENST00000487038 OR10G8Q8NGN5 311 aa4.8□□□□□ -1.64
PDPN-205ENST00000487038 JPT2Q9H910 190 aa4.8□□□□□ -1.64
PDPN-205ENST00000487038 PSG8Q9UQ74 426 aa4.8□□□□□ -1.64
PDPN-205ENST00000487038 PHLDA3Q9Y5J5 127 aa4.8□□□□□ -1.64
PDPN-205ENST00000487038 TRAV8-4A0A0B4J246 113 aa4.79□□□□□ -1.64
PDPN-205ENST00000487038 FAM231BA6NCW3 169 aa4.79□□□□□ -1.64
PDPN-205ENST00000487038 B4DEV8 164 aa4.79□□□□□ -1.64
PDPN-205ENST00000487038 NDUFS6O75380 124 aaKnown RBP4.79□□□□□ -1.64
PDPN-205ENST00000487038 P01737 135 aa4.79□□□□□ -1.64
PDPN-205ENST00000487038 GZMBP10144 247 aa4.79□□□□□ -1.64
PDPN-205ENST00000487038 TPT1P13693 172 aaKnown RBP4.79□□□□□ -1.64
PDPN-205ENST00000487038 BTCP35070 178 aa4.79□□□□□ -1.64
PDPN-205ENST00000487038 MAJINQ3KP22 176 aa4.79□□□□□ -1.64
PDPN-205ENST00000487038 LINC00269Q8N2A0 174 aa4.79□□□□□ -1.64
PDPN-205ENST00000487038 STPG4Q8N801 248 aa4.79□□□□□ -1.64
PDPN-205ENST00000487038 SFRP2Q96HF1 295 aa4.79□□□□□ -1.64
PDPN-205ENST00000487038 VAX2Q9UIW0 290 aa4.79□□□□□ -1.64
PDPN-205ENST00000487038 PKIGQ9Y2B9 76 aa4.79□□□□□ -1.64
PDPN-205ENST00000487038 IGLV10-54A0A075B6I4 117 aa4.78□□□□□ -1.64
PDPN-205ENST00000487038 TRBV25-1A0A075B6N4 114 aa4.78□□□□□ -1.64
PDPN-205ENST00000487038 IGKV3D-20A0A0C4DH25 116 aa4.78□□□□□ -1.64
PDPN-205ENST00000487038 IGKV2-24A0A0C4DH68 120 aa4.78□□□□□ -1.64
PDPN-205ENST00000487038 FABP5P3A8MUU1 101 aa4.78□□□□□ -1.64
PDPN-205ENST00000487038 M0R381 172 aa4.78□□□□□ -1.64
PDPN-205ENST00000487038 IFNA7P01567 189 aa4.78□□□□□ -1.64
PDPN-205ENST00000487038 ARMS2P0C7Q2 107 aa4.78□□□□□ -1.64
PDPN-205ENST00000487038 COX6A2Q02221 97 aa4.78□□□□□ -1.64
PDPN-205ENST00000487038 REG3AQ06141 175 aa4.78□□□□□ -1.64
PDPN-205ENST00000487038 ZNF56Q15929 161 aa4.78□□□□□ -1.64
PDPN-205ENST00000487038 KRTAP26-1Q6PEX3 210 aa4.78□□□□□ -1.64
PDPN-205ENST00000487038 Q6ZRP5 223 aa4.78□□□□□ -1.64
PDPN-205ENST00000487038 ZFP82Q8N141 532 aa4.78□□□□□ -1.64
PDPN-205ENST00000487038 LYPD6BQ8NI32 183 aa4.78□□□□□ -1.64
PDPN-205ENST00000487038 SCGB1C1Q8TD33 95 aa4.78□□□□□ -1.64
PDPN-205ENST00000487038 TRAV6A0A075B6T7 132 aa4.77□□□□□ -1.65
PDPN-205ENST00000487038 TRAV26-2A0A0B4J265 109 aa4.77□□□□□ -1.65
PDPN-205ENST00000487038 H7C1H1 209 aa4.77□□□□□ -1.65
PDPN-205ENST00000487038 RAB4BP61018 213 aa4.77□□□□□ -1.65
PDPN-205ENST00000487038 RBX1P62877 108 aa4.77□□□□□ -1.65
PDPN-205ENST00000487038 IL15RAQ13261 267 aa4.77□□□□□ -1.65
PDPN-205ENST00000487038 DNLZQ5SXM8 178 aa4.77□□□□□ -1.65
PDPN-205ENST00000487038 ZNF664Q8N3J9 261 aa4.77□□□□□ -1.65
PDPN-205ENST00000487038 SEC22CQ9BRL7 303 aa4.77□□□□□ -1.65
PDPN-205ENST00000487038 LINC00474Q9P2X8 69 aa4.77□□□□□ -1.65
PDPN-205ENST00000487038 EIF3GO75821 320 aaKnown RBP eCLIP4.76□□□□□ -1.65
PDPN-205ENST00000487038 ARL14EPLP0DKL9 152 aa4.76□□□□□ -1.65
PDPN-205ENST00000487038 RPS10P46783 165 aaKnown RBP4.76□□□□□ -1.65
PDPN-205ENST00000487038 GAGE6Q13070 117 aa4.76□□□□□ -1.65
PDPN-205ENST00000487038 LRRC37A5PQ49AS3 106 aa4.76□□□□□ -1.65
PDPN-205ENST00000487038 CFAP161Q6P656 301 aa4.76□□□□□ -1.65
PDPN-205ENST00000487038 NEXN-AS1Q8NBZ9 246 aa4.76□□□□□ -1.65
PDPN-205ENST00000487038 DERL1Q9BUN8 251 aa4.76□□□□□ -1.65
PDPN-205ENST00000487038 RBM38Q9H0Z9 239 aaKnown RBP4.76□□□□□ -1.65
PDPN-205ENST00000487038 NUDT15Q9NV35 164 aa4.76□□□□□ -1.65
PDPN-205ENST00000487038 M0R036 132 aa4.75□□□□□ -1.65
PDPN-205ENST00000487038 HMGB3O15347 200 aaKnown RBP4.75□□□□□ -1.65
PDPN-205ENST00000487038 CDC34P49427 236 aaPredicted RBP4.75□□□□□ -1.65
PDPN-205ENST00000487038 CACNG7P62955 275 aa4.75□□□□□ -1.65
PDPN-205ENST00000487038 PSORS1C2Q9UIG4 136 aa4.75□□□□□ -1.65
PDPN-205ENST00000487038 EPDR1Q9UM22 224 aa4.75□□□□□ -1.65
PDPN-205ENST00000487038 ARL2-SNX15V9GYD0 113 aa4.75□□□□□ -1.65
PDPN-205ENST00000487038 IGHV1-24A0A0C4DH33 117 aa4.74□□□□□ -1.65
PDPN-205ENST00000487038 TRBV6-1A0A0K0K1D8 114 aa4.74□□□□□ -1.65
PDPN-205ENST00000487038 GRIFINA4D1Z8 144 aa4.74□□□□□ -1.65
PDPN-205ENST00000487038 CCDC160A6NGH7 325 aa4.74□□□□□ -1.65
PDPN-205ENST00000487038 KRBOX1C9JBD0 128 aa4.74□□□□□ -1.65
PDPN-205ENST00000487038 LYRM1O43325 122 aa4.74□□□□□ -1.65
PDPN-205ENST00000487038 SLPIP03973 132 aa4.74□□□□□ -1.65
PDPN-205ENST00000487038 PET100P0DJ07 73 aa4.74□□□□□ -1.65
PDPN-205ENST00000487038 IL7P13232 177 aa4.74□□□□□ -1.65
PDPN-205ENST00000487038 RAB2AP61019 212 aa4.74□□□□□ -1.65
PDPN-205ENST00000487038 SUMO1P63165 101 aaKnown RBP4.74□□□□□ -1.65
PDPN-205ENST00000487038 SRSF9Q13242 221 aaKnown RBP eCLIP4.74□□□□□ -1.65
PDPN-205ENST00000487038 PRSS3P2Q8NHM4 247 aa4.74□□□□□ -1.65
PDPN-205ENST00000487038 TMEM167BQ9NRX6 74 aa4.74□□□□□ -1.65
PDPN-205ENST00000487038 HSPB11Q9Y547 144 aa4.74□□□□□ -1.65
PDPN-205ENST00000487038 A0A096LNI7 61 aa4.73□□□□□ -1.65
PDPN-205ENST00000487038 MUC21A0A0G2JKD1 596 aa4.73□□□□□ -1.65
PDPN-205ENST00000487038 F5H697 171 aa4.73□□□□□ -1.65
PDPN-205ENST00000487038 H2AFB2P0C5Z0 115 aa4.73□□□□□ -1.65
PDPN-205ENST00000487038 STAG3L2P0CL84 134 aa4.73□□□□□ -1.65
PDPN-205ENST00000487038 STAG3L3P0CL85 134 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms