RNA–Protein interactions for RNA: ENST00000483065.1

R3HDM1-216, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-216ENST00000483065 FAM167A-AS1Q96KT0 104 aa2.84□□□□□ -1.95
R3HDM1-216ENST00000483065 PTPRMP28827 1452 aa2.84□□□□□ -1.96
R3HDM1-216ENST00000483065 GOLGA3Q08378 1498 aa2.84□□□□□ -1.96
R3HDM1-216ENST00000483065 CDK12Q9NYV4 1490 aaPredicted RBP2.84□□□□□ -1.96
R3HDM1-216ENST00000483065 EPRSP07814 1512 aaKnown RBP2.83□□□□□ -1.96
R3HDM1-216ENST00000483065 CCDC88CQ9P219 2028 aa2.83□□□□□ -1.96
R3HDM1-216ENST00000483065 LRP5O75197 1615 aa2.83□□□□□ -1.96
R3HDM1-216ENST00000483065 STRCQ7RTU9 1775 aa2.83□□□□□ -1.96
R3HDM1-216ENST00000483065 IGLC7A0M8Q6 106 aa2.83□□□□□ -1.96
R3HDM1-216ENST00000483065 HIGD1CA8MV81 97 aa2.83□□□□□ -1.96
R3HDM1-216ENST00000483065 BCE1O60756 84 aa2.83□□□□□ -1.96
R3HDM1-216ENST00000483065 IGFL1Q6UW32 110 aa2.83□□□□□ -1.96
R3HDM1-216ENST00000483065 IFI27L1Q96BM0 104 aa2.83□□□□□ -1.96
R3HDM1-216ENST00000483065 ST20Q9HBF5 79 aa2.83□□□□□ -1.96
R3HDM1-216ENST00000483065 SMCO4Q9NRQ5 59 aa2.83□□□□□ -1.96
R3HDM1-216ENST00000483065 MALRD1Q5VYJ5 2156 aa2.83□□□□□ -1.96
R3HDM1-216ENST00000483065 TOPAZ1Q8N9V7 1692 aa2.82□□□□□ -1.96
R3HDM1-216ENST00000483065 KIAA1549LQ6ZVL6 1849 aa2.82□□□□□ -1.96
R3HDM1-216ENST00000483065 MYO16Q9Y6X6 1858 aa2.82□□□□□ -1.96
R3HDM1-216ENST00000483065 JMJD7-PLA2G4BH0Y9G9 81 aa2.82□□□□□ -1.96
R3HDM1-216ENST00000483065 SYS1-DBNDD2H3BUS1 97 aa2.82□□□□□ -1.96
R3HDM1-216ENST00000483065 NMBP08949 121 aa2.82□□□□□ -1.96
R3HDM1-216ENST00000483065 PRB4P10163 310 aaPredicted RBP2.82□□□□□ -1.96
R3HDM1-216ENST00000483065 LINC00315P59091 139 aa2.82□□□□□ -1.96
R3HDM1-216ENST00000483065 C10orf55Q5SWW7 151 aa2.82□□□□□ -1.96
R3HDM1-216ENST00000483065 LIMD2Q9BT23 127 aa2.82□□□□□ -1.96
R3HDM1-216ENST00000483065 PRO1854Q9UHT4 67 aa2.82□□□□□ -1.96
R3HDM1-216ENST00000483065 ROBO1Q9Y6N7 1651 aa2.82□□□□□ -1.96
R3HDM1-216ENST00000483065 LAMB4A4D0S4 1761 aa2.82□□□□□ -1.96
R3HDM1-216ENST00000483065 LAMB2P55268 1798 aa2.82□□□□□ -1.96
R3HDM1-216ENST00000483065 LOC285095A0A1B0GVY8 99 aa2.81□□□□□ -1.96
R3HDM1-216ENST00000483065 ELOF1P60002 83 aaKnown RBP2.81□□□□□ -1.96
R3HDM1-216ENST00000483065 C10orf128Q5T292 105 aa2.81□□□□□ -1.96
R3HDM1-216ENST00000483065 NXT2Q9NPJ8 142 aaKnown RBP2.81□□□□□ -1.96
R3HDM1-216ENST00000483065 TMEM14CQ9P0S9 112 aa2.81□□□□□ -1.96
R3HDM1-216ENST00000483065 FANCAO15360 1455 aa2.81□□□□□ -1.96
R3HDM1-216ENST00000483065 TNS1Q9HBL0 1735 aaKnown RBP2.81□□□□□ -1.96
R3HDM1-216ENST00000483065 ABCA3Q99758 1704 aa2.8□□□□□ -1.96
R3HDM1-216ENST00000483065 ATP10BO94823 1461 aa2.8□□□□□ -1.96
R3HDM1-216ENST00000483065 TRBV7-3A0A075B6L6 115 aa2.8□□□□□ -1.96
R3HDM1-216ENST00000483065 PPYP01298 95 aa2.8□□□□□ -1.96
R3HDM1-216ENST00000483065 IGLV3-19P01714 112 aa2.8□□□□□ -1.96
R3HDM1-216ENST00000483065 UBE2D1P51668 147 aa2.8□□□□□ -1.96
R3HDM1-216ENST00000483065 CSAG1Q6PB30 78 aa2.8□□□□□ -1.96
R3HDM1-216ENST00000483065 C20orf78Q9BR46 151 aa2.8□□□□□ -1.96
R3HDM1-216ENST00000483065 MANBALQ9NQG1 85 aa2.8□□□□□ -1.96
R3HDM1-216ENST00000483065 SPCS1Q9Y6A9 102 aa2.8□□□□□ -1.96
R3HDM1-216ENST00000483065 ARAP2Q8WZ64 1704 aa2.79□□□□□ -1.96
R3HDM1-216ENST00000483065 MLH3Q9UHC1 1453 aa2.79□□□□□ -1.96
R3HDM1-216ENST00000483065 CLIP1P30622 1438 aa2.79□□□□□ -1.96
R3HDM1-216ENST00000483065 A0A1W2PNN7 141 aa2.79□□□□□ -1.96
R3HDM1-216ENST00000483065 PDCD5O14737 125 aa2.79□□□□□ -1.96
R3HDM1-216ENST00000483065 APOC3P02656 99 aa2.79□□□□□ -1.96
R3HDM1-216ENST00000483065 PDE6GP18545 87 aa2.79□□□□□ -1.96
R3HDM1-216ENST00000483065 TPRXLQ17RH7 258 aa2.79□□□□□ -1.96
R3HDM1-216ENST00000483065 ALKAL2Q6UX46 152 aa2.79□□□□□ -1.96
R3HDM1-216ENST00000483065 ODF3Q96PU9 254 aa2.79□□□□□ -1.96
R3HDM1-216ENST00000483065 LINC00474Q9P2X8 69 aa2.79□□□□□ -1.96
R3HDM1-216ENST00000483065 ZFC3H1O60293 1989 aaKnown RBP2.79□□□□□ -1.96
R3HDM1-216ENST00000483065 CCDC88BA6NC98 1476 aa2.78□□□□□ -1.96
R3HDM1-216ENST00000483065 ACYP1P07311 99 aa2.78□□□□□ -1.96
R3HDM1-216ENST00000483065 SNRPFP62306 86 aaKnown RBP2.78□□□□□ -1.96
R3HDM1-216ENST00000483065 SSBP1Q04837 148 aaKnown RBP2.78□□□□□ -1.96
R3HDM1-216ENST00000483065 FAM74A4Q5TZK3 123 aa2.78□□□□□ -1.96
R3HDM1-216ENST00000483065 TXNDC17Q9BRA2 123 aa2.78□□□□□ -1.96
R3HDM1-216ENST00000483065 TTTY12Q9BZ98 90 aa2.78□□□□□ -1.96
R3HDM1-216ENST00000483065 DYNLRB1Q9NP97 96 aa2.78□□□□□ -1.96
R3HDM1-216ENST00000483065 LAMB1P07942 1786 aa2.78□□□□□ -1.96
R3HDM1-216ENST00000483065 CASZ1Q86V15 1759 aa2.78□□□□□ -1.96
R3HDM1-216ENST00000483065 UNC13BO14795 1591 aa2.78□□□□□ -1.96
R3HDM1-216ENST00000483065 IQSEC2Q5JU85 1478 aa2.77□□□□□ -1.97
R3HDM1-216ENST00000483065 EDDM3BP56851 147 aa2.77□□□□□ -1.97
R3HDM1-216ENST00000483065 TDRG1Q3Y452 100 aa2.77□□□□□ -1.97
R3HDM1-216ENST00000483065 Q86TA4 180 aa2.77□□□□□ -1.97
R3HDM1-216ENST00000483065 AMELYQ99218 206 aa2.77□□□□□ -1.97
R3HDM1-216ENST00000483065 LENEPQ9Y5L5 61 aa2.77□□□□□ -1.97
R3HDM1-216ENST00000483065 MCM3APO60318 1980 aa2.77□□□□□ -1.97
R3HDM1-216ENST00000483065 NACAE9PAV3 2078 aa2.77□□□□□ -1.97
R3HDM1-216ENST00000483065 ANKARQ7Z5J8 1434 aa2.76□□□□□ -1.97
R3HDM1-216ENST00000483065 CITO14578 2027 aa2.76□□□□□ -1.97
R3HDM1-216ENST00000483065 COL16A1Q07092 1604 aaPredicted RBP2.76□□□□□ -1.97
R3HDM1-216ENST00000483065 A0A1W2PNU3 283 aaPredicted RBP2.76□□□□□ -1.97
R3HDM1-216ENST00000483065 DNAL4O96015 105 aa2.76□□□□□ -1.97
R3HDM1-216ENST00000483065 UBE2D3P61077 147 aa2.76□□□□□ -1.97
R3HDM1-216ENST00000483065 UBE2D2P62837 147 aa2.76□□□□□ -1.97
R3HDM1-216ENST00000483065 DEFA5Q01523 94 aa2.76□□□□□ -1.97
R3HDM1-216ENST00000483065 PMCHL1Q16048 86 aa2.76□□□□□ -1.97
R3HDM1-216ENST00000483065 SPATA45Q537H7 98 aa2.76□□□□□ -1.97
R3HDM1-216ENST00000483065 SPACA4Q8TDM5 124 aa2.76□□□□□ -1.97
R3HDM1-216ENST00000483065 SNURFQ9Y675 71 aa2.76□□□□□ -1.97
R3HDM1-216ENST00000483065 COL11A1P12107 1806 aaPredicted RBP2.76□□□□□ -1.97
R3HDM1-216ENST00000483065 HEATR5AQ86XA9 2040 aa2.76□□□□□ -1.97
R3HDM1-216ENST00000483065 ATRXP46100 2492 aa2.76□□□□□ -1.97
R3HDM1-216ENST00000483065 PRR14LQ5THK1 2151 aa2.76□□□□□ -1.97
R3HDM1-216ENST00000483065 DNMBPQ6XZF7 1577 aa2.75□□□□□ -1.97
R3HDM1-216ENST00000483065 IGKV3-7A0A075B6H7 116 aa2.75□□□□□ -1.97
R3HDM1-216ENST00000483065 A0A1W2PPM0 123 aa2.75□□□□□ -1.97
R3HDM1-216ENST00000483065 KLKP1Q107X0 134 aa2.75□□□□□ -1.97
R3HDM1-216ENST00000483065 ZNF56Q15929 161 aa2.75□□□□□ -1.97
R3HDM1-216ENST00000483065 LINC00322Q6ZN03 302 aaPredicted RBP2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms