RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 RHPN1-AS1Q9BWJ2 59 aa5.77□□□□□ -1.49
SNX13-208ENST00000482558 CSTL1Q9H114 145 aa5.77□□□□□ -1.49
SNX13-208ENST00000482558 ZZEF1O43149 2961 aa5.77□□□□□ -1.49
SNX13-208ENST00000482558 ACACBO00763 2458 aa5.76□□□□□ -1.49
SNX13-208ENST00000482558 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.76□□□□□ -1.493e-18■■■■■ 36
SNX13-208ENST00000482558 IGKV3D-20A0A0C4DH25 116 aa5.76□□□□□ -1.49
SNX13-208ENST00000482558 IGHV3-66A0A0C4DH42 116 aa5.76□□□□□ -1.49
SNX13-208ENST00000482558 ZNF207O43670 478 aaKnown RBP5.76□□□□□ -1.49
SNX13-208ENST00000482558 ASIPP42127 132 aa5.76□□□□□ -1.49
SNX13-208ENST00000482558 NUTF2P61970 127 aaKnown RBP5.76□□□□□ -1.49
SNX13-208ENST00000482558 SNRPD3P62318 126 aaKnown RBP5.76□□□□□ -1.49
SNX13-208ENST00000482558 LGALS9BQ3B8N2 356 aa5.76□□□□□ -1.49
SNX13-208ENST00000482558 TDRG1Q3Y452 100 aa5.76□□□□□ -1.49
SNX13-208ENST00000482558 SPANXN1Q5VSR9 72 aa5.76□□□□□ -1.49
SNX13-208ENST00000482558 LGALS9CQ6DKI2 356 aa5.76□□□□□ -1.49
SNX13-208ENST00000482558 UNQ9165/PRO28630Q6UXU0 137 aa5.76□□□□□ -1.49
SNX13-208ENST00000482558 Q6ZN92 141 aa5.76□□□□□ -1.49
SNX13-208ENST00000482558 OR8A1Q8NGG7 326 aa5.76□□□□□ -1.49
SNX13-208ENST00000482558 OR1N2Q8NGR9 330 aa5.76□□□□□ -1.49
SNX13-208ENST00000482558 FAM19A4Q96LR4 140 aa5.76□□□□□ -1.49
SNX13-208ENST00000482558 UBE2E2Q96LR5 201 aa5.76□□□□□ -1.49
SNX13-208ENST00000482558 SNHG12Q9BXW3 62 aa5.76□□□□□ -1.49
SNX13-208ENST00000482558 ESM1Q9NQ30 184 aa5.76□□□□□ -1.49
SNX13-208ENST00000482558 LINC00527Q9UJ94 153 aa5.76□□□□□ -1.49
SNX13-208ENST00000482558 ABCA2Q9BZC7 2435 aa5.76□□□□□ -1.49
SNX13-208ENST00000482558 AKAP6Q13023 2319 aa5.75□□□□□ -1.49
SNX13-208ENST00000482558 DUSP14O95147 198 aaKnown RBP5.75□□□□□ -1.49
SNX13-208ENST00000482558 IGHV3-11P01762 117 aa5.75□□□□□ -1.49
SNX13-208ENST00000482558 IGHV4-59P01825 116 aa5.75□□□□□ -1.49
SNX13-208ENST00000482558 LGALS1P09382 135 aaKnown RBP5.75□□□□□ -1.49
SNX13-208ENST00000482558 TSPOP30536 169 aa5.75□□□□□ -1.49
SNX13-208ENST00000482558 IFI27P40305 119 aaPredicted RBP5.75□□□□□ -1.49
SNX13-208ENST00000482558 TAL2Q16559 108 aa5.75□□□□□ -1.49
SNX13-208ENST00000482558 ADAMTSL5Q6ZMM2 481 aa5.75□□□□□ -1.49
SNX13-208ENST00000482558 Q8N8P6 123 aa5.75□□□□□ -1.49
SNX13-208ENST00000482558 MYOZ3Q8TDC0 251 aa5.75□□□□□ -1.49
SNX13-208ENST00000482558 SPTAN1Q13813 2472 aaKnown RBP5.75□□□□□ -1.49
SNX13-208ENST00000482558 SETXQ7Z333 2677 aaKnown RBP5.74□□□□□ -1.49
SNX13-208ENST00000482558 IGSF10Q6WRI0 2623 aa5.74□□□□□ -1.49
SNX13-208ENST00000482558 DCHS2Q6V1P9 2916 aa5.74□□□□□ -1.49
SNX13-208ENST00000482558 IGHV3OR16-13A0A075B7E8 117 aa5.74□□□□□ -1.49
SNX13-208ENST00000482558 IGHV3-49A0A0A0MS15 119 aa5.74□□□□□ -1.49
SNX13-208ENST00000482558 IGHV3-74A0A0B4J1X5 117 aa5.74□□□□□ -1.49
SNX13-208ENST00000482558 TRAV2A0A0B4J234 112 aa5.74□□□□□ -1.49
SNX13-208ENST00000482558 M0R381 172 aa5.74□□□□□ -1.49
SNX13-208ENST00000482558 TRBV12-3P01733 135 aa5.74□□□□□ -1.49
SNX13-208ENST00000482558 S100A4P26447 101 aaKnown RBP5.74□□□□□ -1.49
SNX13-208ENST00000482558 FCER1GP30273 86 aa5.74□□□□□ -1.49
SNX13-208ENST00000482558 TFPI2P48307 235 aa5.74□□□□□ -1.49
SNX13-208ENST00000482558 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.74□□□□□ -1.49
SNX13-208ENST00000482558 SLC25A34Q6PIV7 304 aa5.74□□□□□ -1.49
SNX13-208ENST00000482558 Q8N2B8 174 aa5.74□□□□□ -1.49
SNX13-208ENST00000482558 ZFAND2AQ8N6M9 145 aa5.74□□□□□ -1.49
SNX13-208ENST00000482558 RNF185Q96GF1 192 aa5.74□□□□□ -1.49
SNX13-208ENST00000482558 C2orf48Q96LS8 159 aa5.74□□□□□ -1.49
SNX13-208ENST00000482558 C20orf78Q9BR46 151 aa5.74□□□□□ -1.49
SNX13-208ENST00000482558 TACC2O95359 2948 aa5.74□□□□□ -1.49
SNX13-208ENST00000482558 KLLNB2CW77 178 aa5.73□□□□□ -1.49
SNX13-208ENST00000482558 NPYP01303 97 aa5.73□□□□□ -1.49
SNX13-208ENST00000482558 RNF224P0DH78 156 aa5.73□□□□□ -1.49
SNX13-208ENST00000482558 IGLL1P15814 213 aa5.73□□□□□ -1.49
SNX13-208ENST00000482558 GAGE5Q13069 117 aa5.73□□□□□ -1.49
SNX13-208ENST00000482558 GAGE6Q13070 117 aa5.73□□□□□ -1.49
SNX13-208ENST00000482558 C12orf54Q6X4T0 127 aa5.73□□□□□ -1.49
SNX13-208ENST00000482558 OR2K2Q8NGT1 345 aa5.73□□□□□ -1.49
SNX13-208ENST00000482558 IFI27L1Q96BM0 104 aa5.73□□□□□ -1.49
SNX13-208ENST00000482558 PPDPFQ9H3Y8 114 aa5.73□□□□□ -1.49
SNX13-208ENST00000482558 DPH3P1Q9H4G8 78 aa5.73□□□□□ -1.49
SNX13-208ENST00000482558 SCRT2Q9NQ03 307 aa5.73□□□□□ -1.49
SNX13-208ENST00000482558 GOLT1BQ9Y3E0 138 aa5.73□□□□□ -1.49
SNX13-208ENST00000482558 PHLDA3Q9Y5J5 127 aa5.73□□□□□ -1.49
SNX13-208ENST00000482558 CFAP46Q8IYW2 2715 aa5.73□□□□□ -1.49
SNX13-208ENST00000482558 MYO18BQ8IUG5 2567 aa5.72□□□□□ -1.49
SNX13-208ENST00000482558 USP24Q9UPU5 2620 aa5.72□□□□□ -1.49
SNX13-208ENST00000482558 LOC389332A0A1B0GUA5 103 aa5.72□□□□□ -1.49
SNX13-208ENST00000482558 A0A1B0GV90 55 aa5.72□□□□□ -1.49
SNX13-208ENST00000482558 DLEU1O43261 78 aa5.72□□□□□ -1.49
SNX13-208ENST00000482558 NXPH4O95158 308 aa5.72□□□□□ -1.49
SNX13-208ENST00000482558 RPL32P62910 135 aaKnown RBP5.72□□□□□ -1.49
SNX13-208ENST00000482558 ORMDL2Q53FV1 153 aa5.72□□□□□ -1.49
SNX13-208ENST00000482558 LCE1AQ5T7P2 110 aa5.72□□□□□ -1.49
SNX13-208ENST00000482558 DCANP1Q8TF63 244 aa5.72□□□□□ -1.49
SNX13-208ENST00000482558 AP1S3Q96PC3 154 aa5.72□□□□□ -1.49
SNX13-208ENST00000482558 USP9XQ93008 2570 aaPredicted RBP5.72□□□□□ -1.49
SNX13-208ENST00000482558 RELNP78509 3460 aa5.71□□□□□ -1.49
SNX13-208ENST00000482558 UNC79Q9P2D8 2635 aa5.71□□□□□ -1.5
SNX13-208ENST00000482558 IGLV5-45A0A087WSX0 123 aa5.71□□□□□ -1.5
SNX13-208ENST00000482558 TCAPO15273 167 aa5.71□□□□□ -1.5
SNX13-208ENST00000482558 SMIM17P0DL12 118 aa5.71□□□□□ -1.5
SNX13-208ENST00000482558 COX8AP10176 69 aa5.71□□□□□ -1.5
SNX13-208ENST00000482558 RNASE4P34096 147 aaKnown RBP5.71□□□□□ -1.5
SNX13-208ENST00000482558 FOXI2Q6ZQN5 318 aa5.71□□□□□ -1.5
SNX13-208ENST00000482558 ATOH7Q8N100 152 aa5.71□□□□□ -1.5
SNX13-208ENST00000482558 POM121L12Q8N7R1 296 aa5.71□□□□□ -1.5
SNX13-208ENST00000482558 MPLKIPQ8TAP9 179 aa5.71□□□□□ -1.5
SNX13-208ENST00000482558 ZNF702PQ9H963 129 aa5.71□□□□□ -1.5
SNX13-208ENST00000482558 PRRC2AP48634 2157 aaKnown RBP5.71□□□□□ -1.5
SNX13-208ENST00000482558 SPG11Q96JI7 2443 aa5.7□□□□□ -1.5
SNX13-208ENST00000482558 A0A096LNJ9 63 aa5.7□□□□□ -1.5
SNX13-208ENST00000482558 IGLV5-52A0A0A0MRZ9 124 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms