RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 FHL2Q14192 279 aa9.3□□□□□ -0.92
HDAC1-208ENST00000482310 CLRN3Q8NCR9 226 aa9.3□□□□□ -0.92
HDAC1-208ENST00000482310 PTH2Q96A98 100 aa9.3□□□□□ -0.92
HDAC1-208ENST00000482310 ANAPC16Q96DE5 110 aa9.3□□□□□ -0.92
HDAC1-208ENST00000482310 AP1S3Q96PC3 154 aa9.3□□□□□ -0.92
HDAC1-208ENST00000482310 KRTAP3-3Q9BYR6 98 aa9.3□□□□□ -0.92
HDAC1-208ENST00000482310 KRTAP3-2Q9BYR7 98 aa9.3□□□□□ -0.92
HDAC1-208ENST00000482310 GFRA4Q9GZZ7 299 aa9.3□□□□□ -0.92
HDAC1-208ENST00000482310 NAT8BQ9UHF3 227 aa9.3□□□□□ -0.92
HDAC1-208ENST00000482310 C7orf77A4D0Y5 90 aa9.29□□□□□ -0.92
HDAC1-208ENST00000482310 NUDT3O95989 172 aa9.29□□□□□ -0.92
HDAC1-208ENST00000482310 FAM3BP58499 235 aaPredicted RBP9.29□□□□□ -0.92
HDAC1-208ENST00000482310 ZNF56Q15929 161 aa9.29□□□□□ -0.92
HDAC1-208ENST00000482310 CASC10Q5T4H9 136 aa9.29□□□□□ -0.92
HDAC1-208ENST00000482310 MRPL54Q6P161 138 aaKnown RBP9.29□□□□□ -0.92
HDAC1-208ENST00000482310 C18orf15Q96N68 181 aa9.29□□□□□ -0.92
HDAC1-208ENST00000482310 KLK5Q9Y337 293 aaPredicted RBP9.29□□□□□ -0.92
HDAC1-208ENST00000482310 A0A1B0GUT8 65 aa9.28□□□□□ -0.92
HDAC1-208ENST00000482310 F5H697 171 aa9.28□□□□□ -0.92
HDAC1-208ENST00000482310 C3orf84H3BNL1 204 aa9.28□□□□□ -0.92
HDAC1-208ENST00000482310 EVI2AP22794 236 aa9.28□□□□□ -0.92
HDAC1-208ENST00000482310 FOXA3P55318 350 aaPredicted RBP9.28□□□□□ -0.92
HDAC1-208ENST00000482310 Q6ZSN1 163 aa9.28□□□□□ -0.92
HDAC1-208ENST00000482310 SVBPQ8N300 66 aa9.28□□□□□ -0.92
HDAC1-208ENST00000482310 HHLA3Q9XRX5 114 aa9.28□□□□□ -0.92
HDAC1-208ENST00000482310 A0A096LPF7 62 aa9.27□□□□□ -0.93
HDAC1-208ENST00000482310 LOC100131303A0A0U1RQF7 123 aa9.27□□□□□ -0.93
HDAC1-208ENST00000482310 FAM231BA6NCW3 169 aa9.27□□□□□ -0.93
HDAC1-208ENST00000482310 PAX4O43316 350 aa9.27□□□□□ -0.93
HDAC1-208ENST00000482310 SNAPINO95295 136 aa9.27□□□□□ -0.93
HDAC1-208ENST00000482310 CRYGDP07320 174 aa9.27□□□□□ -0.93
HDAC1-208ENST00000482310 TRGC1P0CF51 173 aa9.27□□□□□ -0.93
HDAC1-208ENST00000482310 RIGQ13278 110 aa9.27□□□□□ -0.93
HDAC1-208ENST00000482310 PIK3CD-AS1Q5SR53 167 aa9.27□□□□□ -0.93
HDAC1-208ENST00000482310 NDUFAF3Q9BU61 184 aa9.27□□□□□ -0.93
HDAC1-208ENST00000482310 URGCP-MRPS24S4R325 110 aa9.27□□□□□ -0.93
HDAC1-208ENST00000482310 BIRC6Q9NR09 4857 aa9.27□□□□□ -0.93
HDAC1-208ENST00000482310 RHODO00212 210 aa9.26□□□□□ -0.93
HDAC1-208ENST00000482310 P0DMU3 169 aa9.26□□□□□ -0.93
HDAC1-208ENST00000482310 FAM231AP0DMU4 169 aa9.26□□□□□ -0.93
HDAC1-208ENST00000482310 FAM231CP0DMU5 169 aa9.26□□□□□ -0.93
HDAC1-208ENST00000482310 GATA1P15976 413 aaPredicted RBP9.26□□□□□ -0.93
HDAC1-208ENST00000482310 CAMPP49913 170 aa9.26□□□□□ -0.93
HDAC1-208ENST00000482310 CRYBA4P53673 196 aa9.26□□□□□ -0.93
HDAC1-208ENST00000482310 RHEBQ15382 184 aa9.26□□□□□ -0.93
HDAC1-208ENST00000482310 SMIM15Q7Z3B0 74 aa9.26□□□□□ -0.93
HDAC1-208ENST00000482310 SLC25A29Q8N8R3 303 aa9.26□□□□□ -0.93
HDAC1-208ENST00000482310 VSIG2Q96IQ7 327 aa9.26□□□□□ -0.93
HDAC1-208ENST00000482310 CNFNQ9BYD5 112 aa9.26□□□□□ -0.93
HDAC1-208ENST00000482310 CTDSP1Q9GZU7 261 aa9.26□□□□□ -0.93
HDAC1-208ENST00000482310 PRO0255Q9UI72 69 aa9.26□□□□□ -0.93
HDAC1-208ENST00000482310 PLECQ15149 4684 aaKnown RBP9.25□□□□□ -0.93
HDAC1-208ENST00000482310 K7EQD1 137 aa9.25□□□□□ -0.93
HDAC1-208ENST00000482310 GYPEP15421 78 aa9.25□□□□□ -0.93
HDAC1-208ENST00000482310 UFSP1Q6NVU6 142 aa9.25□□□□□ -0.93
HDAC1-208ENST00000482310 WDR73Q6P4I2 378 aa9.25□□□□□ -0.93
HDAC1-208ENST00000482310 ATRAIDQ6UW56 229 aa9.25□□□□□ -0.93
HDAC1-208ENST00000482310 ZFP2Q6ZN57 461 aa9.25□□□□□ -0.93
HDAC1-208ENST00000482310 DPH3P1Q9H4G8 78 aa9.25□□□□□ -0.93
HDAC1-208ENST00000482310 KCNIP4Q6PIL6 250 aa9.24□□□□□ -0.93
HDAC1-208ENST00000482310 KIF25-AS1Q9Y6Z4 181 aa9.24□□□□□ -0.93
HDAC1-208ENST00000482310 LYSTQ99698 3801 aa9.24□□□□□ -0.93
HDAC1-208ENST00000482310 TRAV26-2A0A0B4J265 109 aa9.23□□□□□ -0.93
HDAC1-208ENST00000482310 GAGE12JA6NER3 117 aa9.23□□□□□ -0.93
HDAC1-208ENST00000482310 GAGE1Q13065 139 aa9.23□□□□□ -0.93
HDAC1-208ENST00000482310 GAGE4Q13068 117 aa9.23□□□□□ -0.93
HDAC1-208ENST00000482310 GAGE5Q13069 117 aa9.23□□□□□ -0.93
HDAC1-208ENST00000482310 RHOHQ15669 191 aa9.23□□□□□ -0.93
HDAC1-208ENST00000482310 GAGE13Q4V321 117 aa9.23□□□□□ -0.93
HDAC1-208ENST00000482310 SUMO4Q6EEV6 95 aa9.23□□□□□ -0.93
HDAC1-208ENST00000482310 PRADC1Q9BSG0 188 aa9.23□□□□□ -0.93
HDAC1-208ENST00000482310 Q9UF83 564 aa9.23□□□□□ -0.93
HDAC1-208ENST00000482310 APLNQ9ULZ1 77 aa9.23□□□□□ -0.93
HDAC1-208ENST00000482310 ICOSQ9Y6W8 199 aa9.23□□□□□ -0.93
HDAC1-208ENST00000482310 A0A087WWC5 75 aa9.22□□□□□ -0.93
HDAC1-208ENST00000482310 S100PP25815 95 aa9.22□□□□□ -0.93
HDAC1-208ENST00000482310 RAB4BP61018 213 aa9.22□□□□□ -0.93
HDAC1-208ENST00000482310 HBBP68871 147 aa9.22□□□□□ -0.93
HDAC1-208ENST00000482310 SLAQ13239 276 aa9.22□□□□□ -0.93
HDAC1-208ENST00000482310 AMN1Q8IY45 258 aa9.22□□□□□ -0.93
HDAC1-208ENST00000482310 TRBV6-4A0A1B0GX49 114 aa9.21□□□□□ -0.94
HDAC1-208ENST00000482310 CIDEAO60543 219 aa9.21□□□□□ -0.94
HDAC1-208ENST00000482310 SRIP30626 198 aa9.21□□□□□ -0.94
HDAC1-208ENST00000482310 LINC00315P59091 139 aa9.21□□□□□ -0.94
HDAC1-208ENST00000482310 C15orf53Q8NAA6 179 aa9.21□□□□□ -0.94
HDAC1-208ENST00000482310 DNAH1Q9P2D7 4330 aa9.21□□□□□ -0.94
HDAC1-208ENST00000482310 A0A1B0GXF2 115 aa9.2□□□□□ -0.94
HDAC1-208ENST00000482310 SMKR1H3BMG3 65 aa9.2□□□□□ -0.94
HDAC1-208ENST00000482310 NCR2O95944 276 aa9.2□□□□□ -0.94
HDAC1-208ENST00000482310 BTF3L4Q96K17 158 aa9.2□□□□□ -0.94
HDAC1-208ENST00000482310 FAM210BQ96KR6 192 aa9.2□□□□□ -0.94
HDAC1-208ENST00000482310 IMMP2LQ96T52 175 aa9.2□□□□□ -0.94
HDAC1-208ENST00000482310 TMEM191AQ9H0A3 160 aa9.2□□□□□ -0.94
HDAC1-208ENST00000482310 ALMS1Q8TCU4 4167 aa9.2□□□□□ -0.94
HDAC1-208ENST00000482310 MRPL23Q16540 153 aaKnown RBP9.19□□□□□ -0.94
HDAC1-208ENST00000482310 ATP5L2Q7Z4Y8 100 aa9.19□□□□□ -0.94
HDAC1-208ENST00000482310 CBLN2Q8IUK8 224 aa9.19□□□□□ -0.94
HDAC1-208ENST00000482310 UBE2DNLQ8IWF7 75 aa9.19□□□□□ -0.94
HDAC1-208ENST00000482310 NEXN-AS1Q8NBZ9 246 aa9.19□□□□□ -0.94
HDAC1-208ENST00000482310 ZNRF2Q8NHG8 242 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms