RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 ZNRF2Q8NHG8 242 aa3.39□□□□□ -1.87
PTCD3-213ENST00000480102 VSIG2Q96IQ7 327 aa3.39□□□□□ -1.87
PTCD3-213ENST00000480102 FAM210AQ96ND0 272 aa3.39□□□□□ -1.87
PTCD3-213ENST00000480102 SMDT1Q9H4I9 107 aa3.39□□□□□ -1.87
PTCD3-213ENST00000480102 MDFICQ9P1T7 246 aa3.39□□□□□ -1.87
PTCD3-213ENST00000480102 A0A096LPF7 62 aa3.38□□□□□ -1.87
PTCD3-213ENST00000480102 TRGV1A0A0A0MS02 117 aa3.38□□□□□ -1.87
PTCD3-213ENST00000480102 IGKV3D-20A0A0C4DH25 116 aa3.38□□□□□ -1.87
PTCD3-213ENST00000480102 TRBV10-1A0A0K0K1A3 114 aa3.38□□□□□ -1.87
PTCD3-213ENST00000480102 GAGE12JA6NER3 117 aa3.38□□□□□ -1.87
PTCD3-213ENST00000480102 KRTAP29-1A8MX34 341 aaPredicted RBP3.38□□□□□ -1.87
PTCD3-213ENST00000480102 KRBOX1C9JBD0 128 aa3.38□□□□□ -1.87
PTCD3-213ENST00000480102 F5H768 121 aa3.38□□□□□ -1.87
PTCD3-213ENST00000480102 RS1O15537 224 aa3.38□□□□□ -1.87
PTCD3-213ENST00000480102 IFNA7P01567 189 aa3.38□□□□□ -1.87
PTCD3-213ENST00000480102 TYMSP04818 313 aa3.38□□□□□ -1.87
PTCD3-213ENST00000480102 MGST1P10620 155 aaKnown RBP3.38□□□□□ -1.87
PTCD3-213ENST00000480102 RNASE3P12724 160 aaKnown RBP3.38□□□□□ -1.87
PTCD3-213ENST00000480102 HTN1P15515 57 aa3.38□□□□□ -1.87
PTCD3-213ENST00000480102 ASIPP42127 132 aa3.38□□□□□ -1.87
PTCD3-213ENST00000480102 CRIP1P50238 77 aa3.38□□□□□ -1.87
PTCD3-213ENST00000480102 FGF8P55075 233 aaPredicted RBP3.38□□□□□ -1.87
PTCD3-213ENST00000480102 UBE2G1P62253 170 aa3.38□□□□□ -1.87
PTCD3-213ENST00000480102 CCL20P78556 96 aa3.38□□□□□ -1.87
PTCD3-213ENST00000480102 MEF2BQ02080 365 aaPredicted RBP3.38□□□□□ -1.87
PTCD3-213ENST00000480102 ZNF876PQ49A33 203 aa3.38□□□□□ -1.87
PTCD3-213ENST00000480102 UFSP1Q6NVU6 142 aa3.38□□□□□ -1.87
PTCD3-213ENST00000480102 FAM213BQ8TBF2 198 aa3.38□□□□□ -1.87
PTCD3-213ENST00000480102 FRZBQ92765 325 aa3.38□□□□□ -1.87
PTCD3-213ENST00000480102 CNFNQ9BYD5 112 aa3.38□□□□□ -1.87
PTCD3-213ENST00000480102 HHLA3Q9XRX5 114 aa3.38□□□□□ -1.87
PTCD3-213ENST00000480102 LY96Q9Y6Y9 160 aa3.38□□□□□ -1.87
PTCD3-213ENST00000480102 AGRNO00468 2067 aa3.38□□□□□ -1.87
PTCD3-213ENST00000480102 F2Z2F3 143 aa3.37□□□□□ -1.87
PTCD3-213ENST00000480102 SMLR1H3BR10 107 aa3.37□□□□□ -1.87
PTCD3-213ENST00000480102 SNAI2O43623 268 aa3.37□□□□□ -1.87
PTCD3-213ENST00000480102 GAGE7O76087 117 aa3.37□□□□□ -1.87
PTCD3-213ENST00000480102 PRM2P04554 102 aa3.37□□□□□ -1.87
PTCD3-213ENST00000480102 GAGE12FP0CL80 117 aa3.37□□□□□ -1.87
PTCD3-213ENST00000480102 GAGE12GP0CL81 117 aa3.37□□□□□ -1.87
PTCD3-213ENST00000480102 GAGE12IP0CL82 117 aa3.37□□□□□ -1.87
PTCD3-213ENST00000480102 BCL2P10415 239 aa3.37□□□□□ -1.87
PTCD3-213ENST00000480102 AKR1C3P42330 323 aa3.37□□□□□ -1.87
PTCD3-213ENST00000480102 ZNF80P51504 273 aaPredicted RBP3.37□□□□□ -1.87
PTCD3-213ENST00000480102 RPS20P60866 119 aaKnown RBP3.37□□□□□ -1.87
PTCD3-213ENST00000480102 GNG5P63218 68 aa3.37□□□□□ -1.87
PTCD3-213ENST00000480102 RHOHQ15669 191 aa3.37□□□□□ -1.87
PTCD3-213ENST00000480102 CFAP126Q5VTH2 177 aa3.37□□□□□ -1.87
PTCD3-213ENST00000480102 ZNF767PQ75MW2 155 aa3.37□□□□□ -1.87
PTCD3-213ENST00000480102 NEGR1Q7Z3B1 354 aa3.37□□□□□ -1.87
PTCD3-213ENST00000480102 PRNTQ86SH4 94 aa3.37□□□□□ -1.87
PTCD3-213ENST00000480102 BAGE2Q86Y30 109 aa3.37□□□□□ -1.87
PTCD3-213ENST00000480102 Q9H8V8 135 aa3.37□□□□□ -1.87
PTCD3-213ENST00000480102 VAX2Q9UIW0 290 aa3.37□□□□□ -1.87
PTCD3-213ENST00000480102 LINC00588Q9Y4M8 146 aa3.37□□□□□ -1.87
PTCD3-213ENST00000480102 ICOSQ9Y6W8 199 aa3.37□□□□□ -1.87
PTCD3-213ENST00000480102 PKHD1P08F94 4074 aa3.36□□□□□ -1.87
PTCD3-213ENST00000480102 FRAS1Q86XX4 4008 aa3.36□□□□□ -1.87
PTCD3-213ENST00000480102 BIRC6Q9NR09 4857 aa3.36□□□□□ -1.87
PTCD3-213ENST00000480102 TRAV9-2A0A087WT02 112 aa3.36□□□□□ -1.87
PTCD3-213ENST00000480102 A0A087WWC5 75 aa3.36□□□□□ -1.87
PTCD3-213ENST00000480102 NBDYA0A0U1RRE5 68 aa3.36□□□□□ -1.87
PTCD3-213ENST00000480102 XKRY2A2RUG3 117 aa3.36□□□□□ -1.87
PTCD3-213ENST00000480102 FAM231BA6NCW3 169 aa3.36□□□□□ -1.87
PTCD3-213ENST00000480102 K7EQD1 137 aa3.36□□□□□ -1.87
PTCD3-213ENST00000480102 GNRH2O43555 120 aa3.36□□□□□ -1.87
PTCD3-213ENST00000480102 DNAH10OSP0CZ25 163 aa3.36□□□□□ -1.87
PTCD3-213ENST00000480102 LINC00694P0DN24 101 aa3.36□□□□□ -1.87
PTCD3-213ENST00000480102 RPL35P42766 123 aaKnown RBP3.36□□□□□ -1.87
PTCD3-213ENST00000480102 FOXA3P55318 350 aaPredicted RBP3.36□□□□□ -1.87
PTCD3-213ENST00000480102 OR5I1Q13606 314 aa3.36□□□□□ -1.87
PTCD3-213ENST00000480102 MUC21Q5SSG8 566 aa3.36□□□□□ -1.87
PTCD3-213ENST00000480102 NFE4Q86UQ8 179 aa3.36□□□□□ -1.87
PTCD3-213ENST00000480102 C10orf126Q8N4M7 172 aa3.36□□□□□ -1.87
PTCD3-213ENST00000480102 OR4C5Q8NGB2 326 aa3.36□□□□□ -1.87
PTCD3-213ENST00000480102 OR10G8Q8NGN5 311 aa3.36□□□□□ -1.87
PTCD3-213ENST00000480102 MPLKIPQ8TAP9 179 aa3.36□□□□□ -1.87
PTCD3-213ENST00000480102 ZC2HC1AQ96GY0 325 aa3.36□□□□□ -1.87
PTCD3-213ENST00000480102 ZNF479Q96JC4 524 aa3.36□□□□□ -1.87
PTCD3-213ENST00000480102 LINC00479Q96M42 142 aa3.36□□□□□ -1.87
PTCD3-213ENST00000480102 PRADC1Q9BSG0 188 aa3.36□□□□□ -1.87
PTCD3-213ENST00000480102 CHCHD7Q9BUK0 85 aa3.36□□□□□ -1.87
PTCD3-213ENST00000480102 LRP1BQ9NZR2 4599 aa3.36□□□□□ -1.87
PTCD3-213ENST00000480102 PKD1P98161 4303 aa3.35□□□□□ -1.87
PTCD3-213ENST00000480102 TRGV4A0A0C4DH28 118 aa3.35□□□□□ -1.87
PTCD3-213ENST00000480102 A0A1B0GVY2 172 aa3.35□□□□□ -1.87
PTCD3-213ENST00000480102 C19orf71A6NCJ1 209 aa3.35□□□□□ -1.87
PTCD3-213ENST00000480102 B4DEV8 164 aa3.35□□□□□ -1.87
PTCD3-213ENST00000480102 SH2D1AO60880 128 aa3.35□□□□□ -1.87
PTCD3-213ENST00000480102 EIF3GO75821 320 aaKnown RBP eCLIP3.35□□□□□ -1.87
PTCD3-213ENST00000480102 IGHV3-53P01767 116 aa3.35□□□□□ -1.87
PTCD3-213ENST00000480102 ARMS2P0C7Q2 107 aa3.35□□□□□ -1.87
PTCD3-213ENST00000480102 S100A4P26447 101 aaKnown RBP3.35□□□□□ -1.87
PTCD3-213ENST00000480102 SRIP30626 198 aa3.35□□□□□ -1.87
PTCD3-213ENST00000480102 UBE2G2P60604 165 aa3.35□□□□□ -1.87
PTCD3-213ENST00000480102 PKIAP61925 76 aa3.35□□□□□ -1.87
PTCD3-213ENST00000480102 LAGE3Q14657 143 aa3.35□□□□□ -1.87
PTCD3-213ENST00000480102 ESRGQ1W209 222 aa3.35□□□□□ -1.87
PTCD3-213ENST00000480102 MAJINQ3KP22 176 aa3.35□□□□□ -1.87
PTCD3-213ENST00000480102 FAM74A3Q4VXF1 159 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 134.7 ms