RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 TPPP3Q9BW30 176 aa8.72□□□□□ -1.01
PRPF39-203ENST00000477626 DPH3P1Q9H4G8 78 aa8.72□□□□□ -1.01
PRPF39-203ENST00000477626 KIR2DL5BA0A0G2JN68 375 aa8.72□□□□□ -1.01
PRPF39-203ENST00000477626 KIR2DL5BA0A0G2JPC4 375 aa8.72□□□□□ -1.01
PRPF39-203ENST00000477626 C3orf79P0CE67 100 aa8.72□□□□□ -1.01
PRPF39-203ENST00000477626 CMC4P56277 68 aaPredicted RBP8.72□□□□□ -1.01
PRPF39-203ENST00000477626 PMCHL1Q16048 86 aa8.72□□□□□ -1.01
PRPF39-203ENST00000477626 BAGE3Q86Y29 109 aa8.72□□□□□ -1.01
PRPF39-203ENST00000477626 KIR2DL5AQ8N109 375 aa8.72□□□□□ -1.01
PRPF39-203ENST00000477626 Q6ZSN1 163 aa8.71□□□□□ -1.02
PRPF39-203ENST00000477626 Q8N8P6 123 aa8.71□□□□□ -1.02
PRPF39-203ENST00000477626 SUMO4Q6EEV6 95 aa8.71□□□□□ -1.02
PRPF39-203ENST00000477626 C20orf78Q9BR46 151 aa8.71□□□□□ -1.02
PRPF39-203ENST00000477626 OVOL2Q9BRP0 275 aa8.71□□□□□ -1.02
PRPF39-203ENST00000477626 NAGKQ9UJ70 344 aa8.71□□□□□ -1.02
PRPF39-203ENST00000477626 RPL39LQ96EH5 51 aaKnown RBP8.7□□□□□ -1.02
PRPF39-203ENST00000477626 BORCS7Q96B45 105 aa8.7□□□□□ -1.02
PRPF39-203ENST00000477626 TRGV11A0A075B6L2 103 aa8.7□□□□□ -1.02
PRPF39-203ENST00000477626 LINC00694P0DN24 101 aa8.7□□□□□ -1.02
PRPF39-203ENST00000477626 LURAP1LQ8IV03 231 aa8.7□□□□□ -1.02
PRPF39-203ENST00000477626 C14orf178Q8N769 122 aaPredicted RBP8.7□□□□□ -1.02
PRPF39-203ENST00000477626 ZMAT4Q9H898 229 aa8.7□□□□□ -1.02
PRPF39-203ENST00000477626 COL7A1Q02388 2944 aa8.69□□□□□ -1.02
PRPF39-203ENST00000477626 RS1O15537 224 aa8.69□□□□□ -1.02
PRPF39-203ENST00000477626 INSP01308 110 aa8.69□□□□□ -1.02
PRPF39-203ENST00000477626 PMCHP20382 165 aa8.69□□□□□ -1.02
PRPF39-203ENST00000477626 CFAP126Q5VTH2 177 aa8.69□□□□□ -1.02
PRPF39-203ENST00000477626 WNK1Q9H4A3 2382 aa8.69□□□□□ -1.02
PRPF39-203ENST00000477626 KRTAP10-11P60412 298 aa8.69□□□□□ -1.02
PRPF39-203ENST00000477626 C9orf66Q5T8R8 295 aa8.69□□□□□ -1.02
PRPF39-203ENST00000477626 ZNF664Q8N3J9 261 aa8.69□□□□□ -1.02
PRPF39-203ENST00000477626 C18orf15Q96N68 181 aa8.69□□□□□ -1.02
PRPF39-203ENST00000477626 X6R8D5 127 aa8.69□□□□□ -1.02
PRPF39-203ENST00000477626 TRBV27A0A0K0K1C4 114 aa8.68□□□□□ -1.02
PRPF39-203ENST00000477626 DAZ2Q13117 558 aaKnown RBP8.68□□□□□ -1.02
PRPF39-203ENST00000477626 AP1S3Q96PC3 154 aa8.68□□□□□ -1.02
PRPF39-203ENST00000477626 Q9UF83 564 aa8.68□□□□□ -1.02
PRPF39-203ENST00000477626 S100A2P29034 98 aa8.68□□□□□ -1.02
PRPF39-203ENST00000477626 CKS2P33552 79 aa8.68□□□□□ -1.02
PRPF39-203ENST00000477626 AKR1D1P51857 326 aa8.68□□□□□ -1.02
PRPF39-203ENST00000477626 SPANXN1Q5VSR9 72 aa8.68□□□□□ -1.02
PRPF39-203ENST00000477626 LINC01545Q5VT33 79 aa8.68□□□□□ -1.02
PRPF39-203ENST00000477626 PHLDA3Q9Y5J5 127 aa8.68□□□□□ -1.02
PRPF39-203ENST00000477626 A8MZ25 164 aa8.68□□□□□ -1.02
PRPF39-203ENST00000477626 K7EMI3 77 aa8.67□□□□□ -1.02
PRPF39-203ENST00000477626 M0R2P5 195 aa8.67□□□□□ -1.02
PRPF39-203ENST00000477626 AMTP48728 403 aa8.67□□□□□ -1.02
PRPF39-203ENST00000477626 SMIM2Q9BVW6 85 aa8.67□□□□□ -1.02
PRPF39-203ENST00000477626 RNASEKQ6P5S7 137 aaKnown RBP8.66□□□□□ -1.02
PRPF39-203ENST00000477626 TMEM263Q8WUH6 116 aaKnown RBP8.66□□□□□ -1.02
PRPF39-203ENST00000477626 MDFIQ99750 246 aa8.66□□□□□ -1.02
PRPF39-203ENST00000477626 NXT2Q9NPJ8 142 aaKnown RBP8.66□□□□□ -1.02
PRPF39-203ENST00000477626 AP5S1Q9NUS5 200 aa8.66□□□□□ -1.02
PRPF39-203ENST00000477626 SYS1-DBNDD2H3BUS1 97 aa8.66□□□□□ -1.02
PRPF39-203ENST00000477626 TSHBP01222 138 aa8.66□□□□□ -1.02
PRPF39-203ENST00000477626 S100A12P80511 92 aa8.66□□□□□ -1.02
PRPF39-203ENST00000477626 ZFP2Q6ZN57 461 aa8.66□□□□□ -1.02
PRPF39-203ENST00000477626 STHQ8IWL8 128 aa8.66□□□□□ -1.02
PRPF39-203ENST00000477626 TMEM158Q8WZ71 300 aa8.66□□□□□ -1.02
PRPF39-203ENST00000477626 RIPPLY3P57055 190 aa8.65□□□□□ -1.02
PRPF39-203ENST00000477626 FCER1GP30273 86 aa8.65□□□□□ -1.02
PRPF39-203ENST00000477626 SUMO2P61956 95 aaKnown RBP8.65□□□□□ -1.02
PRPF39-203ENST00000477626 SPXQ9BT56 116 aa8.65□□□□□ -1.02
PRPF39-203ENST00000477626 LGALS9BQ3B8N2 356 aa8.64□□□□□ -1.03
PRPF39-203ENST00000477626 TOMM6Q96B49 74 aa8.64□□□□□ -1.03
PRPF39-203ENST00000477626 XCL2Q9UBD3 114 aa8.64□□□□□ -1.03
PRPF39-203ENST00000477626 P0DMU3 169 aa8.64□□□□□ -1.03
PRPF39-203ENST00000477626 FAM231AP0DMU4 169 aa8.64□□□□□ -1.03
PRPF39-203ENST00000477626 FAM231CP0DMU5 169 aa8.64□□□□□ -1.03
PRPF39-203ENST00000477626 TMEM70Q9BUB7 260 aa8.64□□□□□ -1.03
PRPF39-203ENST00000477626 NIT2Q9NQR4 276 aa8.64□□□□□ -1.03
PRPF39-203ENST00000477626 STAB1Q9NY15 2570 aa8.64□□□□□ -1.03
PRPF39-203ENST00000477626 MAP1LC3AQ9H492 121 aa8.64□□□□□ -1.03
PRPF39-203ENST00000477626 A0A087WWL8 130 aa8.63□□□□□ -1.03
PRPF39-203ENST00000477626 CBY3A6NI87 242 aa8.63□□□□□ -1.03
PRPF39-203ENST00000477626 PF4P02776 101 aa8.63□□□□□ -1.03
PRPF39-203ENST00000477626 IGLL1P15814 213 aa8.63□□□□□ -1.03
PRPF39-203ENST00000477626 BTF3P20290 206 aaKnown RBP8.63□□□□□ -1.03
PRPF39-203ENST00000477626 ZNF415Q09FC8 603 aa8.63□□□□□ -1.03
PRPF39-203ENST00000477626 ZNF876PQ49A33 203 aa8.63□□□□□ -1.03
PRPF39-203ENST00000477626 IGIPA6NJ69 53 aa8.63□□□□□ -1.03
PRPF39-203ENST00000477626 SSTP61278 116 aa8.63□□□□□ -1.03
PRPF39-203ENST00000477626 IGHV3-53P01767 116 aa8.62□□□□□ -1.03
PRPF39-203ENST00000477626 HBDP02042 147 aa8.62□□□□□ -1.03
PRPF39-203ENST00000477626 KIR2DL5BQ8NHK3 375 aa8.62□□□□□ -1.03
PRPF39-203ENST00000477626 HSBP1O75506 76 aa8.62□□□□□ -1.03
PRPF39-203ENST00000477626 C12orf54Q6X4T0 127 aa8.62□□□□□ -1.03
PRPF39-203ENST00000477626 C3orf56Q8N813 242 aa8.62□□□□□ -1.03
PRPF39-203ENST00000477626 LOC389332A0A1B0GUA5 103 aa8.62□□□□□ -1.03
PRPF39-203ENST00000477626 S100A4P26447 101 aaKnown RBP8.62□□□□□ -1.03
PRPF39-203ENST00000477626 MAJINQ3KP22 176 aa8.61□□□□□ -1.03
PRPF39-203ENST00000477626 SHISA2Q6UWI4 295 aa8.61□□□□□ -1.03
PRPF39-203ENST00000477626 MCRIP2Q9BUT9 160 aaKnown RBP8.61□□□□□ -1.03
PRPF39-203ENST00000477626 A8MWV9 139 aa8.61□□□□□ -1.03
PRPF39-203ENST00000477626 KPRPQ5T749 579 aaPredicted RBP8.61□□□□□ -1.03
PRPF39-203ENST00000477626 PET117Q6UWS5 81 aa8.61□□□□□ -1.03
PRPF39-203ENST00000477626 COL6A5A8TX70 2615 aa8.61□□□□□ -1.03
PRPF39-203ENST00000477626 C16orf74Q96GX8 76 aa8.6□□□□□ -1.03
PRPF39-203ENST00000477626 HHLA3Q9XRX5 114 aa8.6□□□□□ -1.03
PRPF39-203ENST00000477626 LEPROTL1O95214 131 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms