RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 C16orf90A8MZG2 172 aa14.31□□□□□ -0.12
LIME1-204ENST00000476183 RHODO00212 210 aa14.31□□□□□ -0.12
LIME1-204ENST00000476183 IGLV2-8P01709 118 aa14.31□□□□□ -0.12
LIME1-204ENST00000476183 CXCL1P09341 107 aa14.31□□□□□ -0.12
LIME1-204ENST00000476183 MEF2BQ02080 365 aaPredicted RBP14.31□□□□□ -0.12
LIME1-204ENST00000476183 CENPWQ5EE01 88 aa14.31□□□□□ -0.12
LIME1-204ENST00000476183 SPATA12Q7Z6I5 190 aa14.31□□□□□ -0.12
LIME1-204ENST00000476183 GTSF1LQ9H1H1 148 aa14.31□□□□□ -0.12
LIME1-204ENST00000476183 IGHV3-38A0A0C4DH36 116 aa14.3□□□□□ -0.12
LIME1-204ENST00000476183 A0A1B0GVG6 124 aa14.3□□□□□ -0.12
LIME1-204ENST00000476183 RAB19A4D1S5 217 aa14.3□□□□□ -0.12
LIME1-204ENST00000476183 BCL2P10415 239 aa14.3□□□□□ -0.12
LIME1-204ENST00000476183 KRTAP10-2P60368 255 aa14.3□□□□□ -0.12
LIME1-204ENST00000476183 OR10J3Q5JRS4 329 aa14.3□□□□□ -0.12
LIME1-204ENST00000476183 LELP1Q5T871 98 aa14.3□□□□□ -0.12
LIME1-204ENST00000476183 OR10AG1Q8NH19 301 aa14.3□□□□□ -0.12
LIME1-204ENST00000476183 MSRB1Q9NZV6 116 aa14.3□□□□□ -0.12
LIME1-204ENST00000476183 K7EP13 123 aa14.29□□□□□ -0.12
LIME1-204ENST00000476183 LINC01556Q5JQF7 62 aa14.29□□□□□ -0.12
LIME1-204ENST00000476183 APOBP04114 4563 aaKnown RBP14.29□□□□□ -0.12
LIME1-204ENST00000476183 TRAV8-6A0A0B4J262 113 aa14.28□□□□□ -0.12
LIME1-204ENST00000476183 SNAI2O43623 268 aa14.28□□□□□ -0.12
LIME1-204ENST00000476183 IFNA1P01562 189 aa14.28□□□□□ -0.12
LIME1-204ENST00000476183 SSBP4Q9BWG4 385 aaPredicted RBP14.28□□□□□ -0.12
LIME1-204ENST00000476183 TRBV20OR9-2A0A075B6H5 130 aa14.27□□□□□ -0.13
LIME1-204ENST00000476183 MUC21A0A0G2JKD1 596 aa14.27□□□□□ -0.13
LIME1-204ENST00000476183 MUC21A0A140T8X8 626 aa14.27□□□□□ -0.13
LIME1-204ENST00000476183 PDE6DO43924 150 aa14.27□□□□□ -0.13
LIME1-204ENST00000476183 ALKAL2Q6UX46 152 aa14.27□□□□□ -0.13
LIME1-204ENST00000476183 NFE4Q86UQ8 179 aa14.27□□□□□ -0.13
LIME1-204ENST00000476183 C10orf126Q8N4M7 172 aa14.27□□□□□ -0.13
LIME1-204ENST00000476183 MED9Q9NWA0 146 aa14.27□□□□□ -0.13
LIME1-204ENST00000476183 VAX2Q9UIW0 290 aa14.27□□□□□ -0.13
LIME1-204ENST00000476183 OR5AL1P0C617 328 aa14.26□□□□□ -0.13
LIME1-204ENST00000476183 C19orf71A6NCJ1 209 aa14.25□□□□□ -0.13
LIME1-204ENST00000476183 GNG4P50150 75 aa14.25□□□□□ -0.13
LIME1-204ENST00000476183 NKX2-5P52952 324 aaPredicted RBP14.25□□□□□ -0.13
LIME1-204ENST00000476183 IGHV3-30P01768 117 aa14.24□□□□□ -0.13
LIME1-204ENST00000476183 IGHV3-33P01772 117 aa14.24□□□□□ -0.13
LIME1-204ENST00000476183 IGHV3-30-3P0DP02 117 aa14.24□□□□□ -0.13
LIME1-204ENST00000476183 IGHV3-30-5P0DP03 117 aa14.24□□□□□ -0.13
LIME1-204ENST00000476183 GZMBP10144 247 aa14.24□□□□□ -0.13
LIME1-204ENST00000476183 Q8N3U1 123 aa14.24□□□□□ -0.13
LIME1-204ENST00000476183 SMIM12Q96EX1 92 aa14.23□□□□□ -0.13
LIME1-204ENST00000476183 BOLA1Q9Y3E2 137 aa14.23□□□□□ -0.13
LIME1-204ENST00000476183 IBA57-AS1B1ANH7 110 aa14.22□□□□□ -0.13
LIME1-204ENST00000476183 TAGLN2P37802 199 aaKnown RBP14.22□□□□□ -0.13
LIME1-204ENST00000476183 SSTP61278 116 aa14.22□□□□□ -0.13
LIME1-204ENST00000476183 SPANXN1Q5VSR9 72 aa14.22□□□□□ -0.13
LIME1-204ENST00000476183 OR2D3Q8NGH3 330 aa14.22□□□□□ -0.13
LIME1-204ENST00000476183 A0A087WTM6 91 aa14.21□□□□□ -0.13
LIME1-204ENST00000476183 TRBV10-1A0A0K0K1A3 114 aa14.21□□□□□ -0.13
LIME1-204ENST00000476183 RBFOX3A6NFN3 312 aa14.21□□□□□ -0.13
LIME1-204ENST00000476183 IGLC6P0CF74 106 aa14.21□□□□□ -0.13
LIME1-204ENST00000476183 FUSP35637 526 aaKnown RBP eCLIP14.21□□□□□ -0.13
LIME1-204ENST00000476183 ERVFC1-1P60608 527 aa14.21□□□□□ -0.13
LIME1-204ENST00000476183 DAZAP1Q96EP5 407 aaKnown RBP14.21□□□□□ -0.13
LIME1-204ENST00000476183 RAB4BP61018 213 aa14.2□□□□□ -0.14
LIME1-204ENST00000476183 BLOC1S1P78537 153 aa14.2□□□□□ -0.14
LIME1-204ENST00000476183 LYPD6BQ8NI32 183 aa14.2□□□□□ -0.14
LIME1-204ENST00000476183 UBE2D3P61077 147 aa14.19□□□□□ -0.14
LIME1-204ENST00000476183 UBE2D2P62837 147 aa14.19□□□□□ -0.14
LIME1-204ENST00000476183 ZNF56Q15929 161 aa14.19□□□□□ -0.14
LIME1-204ENST00000476183 KIF25-AS1Q9Y6Z4 181 aa14.19□□□□□ -0.14
LIME1-204ENST00000476183 PCLOQ9Y6V0 5065 aa14.18□□□□□ -0.14
LIME1-204ENST00000476183 A0A087WWC5 75 aa14.18□□□□□ -0.14
LIME1-204ENST00000476183 P01737 135 aa14.18□□□□□ -0.14
LIME1-204ENST00000476183 RPS20P60866 119 aaKnown RBP14.18□□□□□ -0.14
LIME1-204ENST00000476183 RPL36AP83881 106 aaKnown RBP14.18□□□□□ -0.14
LIME1-204ENST00000476183 FER1L6-AS1Q8NA97 138 aa14.18□□□□□ -0.14
LIME1-204ENST00000476183 OR10G8Q8NGN5 311 aa14.18□□□□□ -0.14
LIME1-204ENST00000476183 RPL36ALQ969Q0 106 aaKnown RBP14.18□□□□□ -0.14
LIME1-204ENST00000476183 TPPP3Q9BW30 176 aa14.18□□□□□ -0.14
LIME1-204ENST00000476183 Q9HAA7 133 aa14.18□□□□□ -0.14
LIME1-204ENST00000476183 TRBV7-3A0A075B6L6 115 aa14.17□□□□□ -0.14
LIME1-204ENST00000476183 EREGO14944 169 aa14.17□□□□□ -0.14
LIME1-204ENST00000476183 NEXN-AS1Q8NBZ9 246 aa14.17□□□□□ -0.14
LIME1-204ENST00000476183 K7EN84 100 aa14.16□□□□□ -0.14
LIME1-204ENST00000476183 CDK2AP2O75956 126 aa14.16□□□□□ -0.14
LIME1-204ENST00000476183 NUDT10Q8NFP7 164 aa14.16□□□□□ -0.14
LIME1-204ENST00000476183 NUDT11Q96G61 164 aa14.16□□□□□ -0.14
LIME1-204ENST00000476183 KRTAP17-1Q9BYP8 105 aa14.16□□□□□ -0.14
LIME1-204ENST00000476183 BIN3Q9NQY0 253 aa14.16□□□□□ -0.14
LIME1-204ENST00000476183 DAZ4Q86SG3 579 aaKnown RBP14.15□□□□□ -0.14
LIME1-204ENST00000476183 OCC1Q8TAD7 63 aa14.15□□□□□ -0.14
LIME1-204ENST00000476183 AP1S3Q96PC3 154 aa14.15□□□□□ -0.14
LIME1-204ENST00000476183 DAZ3Q9NR90 486 aaKnown RBP14.15□□□□□ -0.14
LIME1-204ENST00000476183 F5H697 171 aa14.14□□□□□ -0.15
LIME1-204ENST00000476183 LAGE3Q14657 143 aa14.14□□□□□ -0.15
LIME1-204ENST00000476183 NIT1Q86X76 327 aa14.14□□□□□ -0.15
LIME1-204ENST00000476183 RNASE7Q9H1E1 156 aaKnown RBP14.14□□□□□ -0.15
LIME1-204ENST00000476183 PGPEP1Q9NXJ5 209 aa14.14□□□□□ -0.15
LIME1-204ENST00000476183 XKRY2A2RUG3 117 aa14.13□□□□□ -0.15
LIME1-204ENST00000476183 LRCOL1A6NCL2 159 aa14.13□□□□□ -0.15
LIME1-204ENST00000476183 TMEM250H0YL14 139 aa14.13□□□□□ -0.15
LIME1-204ENST00000476183 SMIM17P0DL12 118 aa14.13□□□□□ -0.15
LIME1-204ENST00000476183 LYZL1Q6UWQ5 148 aa14.13□□□□□ -0.15
LIME1-204ENST00000476183 ABCA13Q86UQ4 5058 aa14.13□□□□□ -0.15
LIME1-204ENST00000476183 PSCAO43653 123 aa14.12□□□□□ -0.15
LIME1-204ENST00000476183 CACNG7P62955 275 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 522.2 ms