RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 TCTEX1D4Q5JR98 221 aa12.38□□□□□ -0.43
TVP23B-202ENST00000476139 ACANP16112 2415 aa12.38□□□□□ -0.43
TVP23B-202ENST00000476139 ITPR2Q14571 2701 aa12.38□□□□□ -0.43
TVP23B-202ENST00000476139 SETD2Q9BYW2 2564 aaPredicted RBP12.37□□□□□ -0.43
TVP23B-202ENST00000476139 PCP4P48539 62 aa12.37□□□□□ -0.43
TVP23B-202ENST00000476139 SUMO2P61956 95 aaKnown RBP12.37□□□□□ -0.43
TVP23B-202ENST00000476139 RNF152Q8N8N0 203 aa12.37□□□□□ -0.43
TVP23B-202ENST00000476139 SMIM2Q9BVW6 85 aa12.37□□□□□ -0.43
TVP23B-202ENST00000476139 MDFICQ9P1T7 246 aa12.37□□□□□ -0.43
TVP23B-202ENST00000476139 TRBV25-1A0A075B6N4 114 aa12.36□□□□□ -0.43
TVP23B-202ENST00000476139 A0A087WWL8 130 aa12.36□□□□□ -0.43
TVP23B-202ENST00000476139 C9orf118A6NHY6 69 aa12.36□□□□□ -0.43
TVP23B-202ENST00000476139 ATP5LO75964 103 aa12.36□□□□□ -0.43
TVP23B-202ENST00000476139 OR11H1Q8NG94 326 aa12.36□□□□□ -0.43
TVP23B-202ENST00000476139 NIPBLQ6KC79 2804 aaeCLIP12.36□□□□□ -0.43
TVP23B-202ENST00000476139 H3BRM9 83 aa12.36□□□□□ -0.43
TVP23B-202ENST00000476139 MED14OSP0DP75 135 aa12.36□□□□□ -0.43
TVP23B-202ENST00000476139 KHDC1LQ5JSQ8 128 aa12.36□□□□□ -0.43
TVP23B-202ENST00000476139 SAMD13Q5VXD3 122 aa12.36□□□□□ -0.43
TVP23B-202ENST00000476139 LINC00315P59091 139 aa12.36□□□□□ -0.43
TVP23B-202ENST00000476139 CHAC1Q9BUX1 264 aa12.36□□□□□ -0.43
TVP23B-202ENST00000476139 PDZD2O15018 2839 aa12.35□□□□□ -0.43
TVP23B-202ENST00000476139 SCGB3A1Q96QR1 104 aa12.35□□□□□ -0.43
TVP23B-202ENST00000476139 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.35□□□□□ -0.43
TVP23B-202ENST00000476139 SIVA1O15304 175 aa12.35□□□□□ -0.43
TVP23B-202ENST00000476139 Q8N2B8 174 aa12.35□□□□□ -0.43
TVP23B-202ENST00000476139 KIF25-AS1Q9Y6Z4 181 aa12.35□□□□□ -0.43
TVP23B-202ENST00000476139 Q8N1Y9 231 aa12.34□□□□□ -0.43
TVP23B-202ENST00000476139 CDKN1BP46527 198 aa12.34□□□□□ -0.43
TVP23B-202ENST00000476139 HELZ2Q9BYK8 2649 aaKnown RBP12.34□□□□□ -0.43
TVP23B-202ENST00000476139 A0A087WX48 190 aa12.33□□□□□ -0.43
TVP23B-202ENST00000476139 OCIAD2Q56VL3 154 aa12.33□□□□□ -0.43
TVP23B-202ENST00000476139 KNCNA6PVL3 124 aa12.33□□□□□ -0.44
TVP23B-202ENST00000476139 NXPH4O95158 308 aa12.33□□□□□ -0.44
TVP23B-202ENST00000476139 NHP2Q9NX24 153 aaKnown RBP12.33□□□□□ -0.44
TVP23B-202ENST00000476139 SAP30O75446 220 aa12.32□□□□□ -0.44
TVP23B-202ENST00000476139 C11orf44Q8N8P7 122 aa12.32□□□□□ -0.44
TVP23B-202ENST00000476139 IGHV3-16A0A0C4DH30 117 aa12.32□□□□□ -0.44
TVP23B-202ENST00000476139 EMP1P54849 157 aa12.32□□□□□ -0.44
TVP23B-202ENST00000476139 FAM74A4Q5TZK3 123 aa12.32□□□□□ -0.44
TVP23B-202ENST00000476139 C20orf78Q9BR46 151 aa12.32□□□□□ -0.44
TVP23B-202ENST00000476139 HTN1P15515 57 aa12.31□□□□□ -0.44
TVP23B-202ENST00000476139 DLX4Q92988 240 aaPredicted RBP12.31□□□□□ -0.44
TVP23B-202ENST00000476139 CSTL1Q9H114 145 aa12.31□□□□□ -0.44
TVP23B-202ENST00000476139 F5H697 171 aa12.31□□□□□ -0.44
TVP23B-202ENST00000476139 LINC01619G3V211 115 aa12.31□□□□□ -0.44
TVP23B-202ENST00000476139 PRM2P04554 102 aa12.31□□□□□ -0.44
TVP23B-202ENST00000476139 AMTNQ6UX39 209 aa12.31□□□□□ -0.44
TVP23B-202ENST00000476139 C2orf66Q6UXQ4 117 aa12.31□□□□□ -0.44
TVP23B-202ENST00000476139 VPS25Q9BRG1 176 aa12.31□□□□□ -0.44
TVP23B-202ENST00000476139 MTORP42345 2549 aa12.3□□□□□ -0.44
TVP23B-202ENST00000476139 SMIM13P0DJ93 91 aa12.3□□□□□ -0.44
TVP23B-202ENST00000476139 DEFB131AP59861 70 aa12.3□□□□□ -0.44
TVP23B-202ENST00000476139 TMEM61Q8N0U2 210 aa12.3□□□□□ -0.44
TVP23B-202ENST00000476139 ODF3Q96PU9 254 aa12.3□□□□□ -0.44
TVP23B-202ENST00000476139 CHTOPQ9Y3Y2 248 aaKnown RBP12.3□□□□□ -0.44
TVP23B-202ENST00000476139 RBMY1A1P0DJD3 496 aaKnown RBP12.3□□□□□ -0.44
TVP23B-202ENST00000476139 RBMY1CP0DJD4 496 aa12.3□□□□□ -0.44
TVP23B-202ENST00000476139 RBMY1FQ15415 496 aaKnown RBP12.3□□□□□ -0.44
TVP23B-202ENST00000476139 SUMO4Q6EEV6 95 aa12.3□□□□□ -0.44
TVP23B-202ENST00000476139 Q6ZSV7 163 aa12.3□□□□□ -0.44
TVP23B-202ENST00000476139 KLHL30-AS1Q8NEE0 82 aa12.3□□□□□ -0.44
TVP23B-202ENST00000476139 SPCS1Q9Y6A9 102 aa12.3□□□□□ -0.44
TVP23B-202ENST00000476139 NOTCH3Q9UM47 2321 aa12.29□□□□□ -0.44
TVP23B-202ENST00000476139 WNK1Q9H4A3 2382 aa12.29□□□□□ -0.44
TVP23B-202ENST00000476139 UFSP1Q6NVU6 142 aa12.29□□□□□ -0.44
TVP23B-202ENST00000476139 FOXI2Q6ZQN5 318 aa12.29□□□□□ -0.44
TVP23B-202ENST00000476139 POM121L12Q8N7R1 296 aa12.29□□□□□ -0.44
TVP23B-202ENST00000476139 A0A1W2PPM0 123 aa12.29□□□□□ -0.44
TVP23B-202ENST00000476139 ORMDL2Q53FV1 153 aa12.29□□□□□ -0.44
TVP23B-202ENST00000476139 GTF2H5Q6ZYL4 71 aa12.29□□□□□ -0.44
TVP23B-202ENST00000476139 C9orf85Q96MD7 179 aa12.29□□□□□ -0.44
TVP23B-202ENST00000476139 IGHV1OR15-1A0A075B7D0 117 aa12.28□□□□□ -0.44
TVP23B-202ENST00000476139 F8VRH5 84 aa12.28□□□□□ -0.44
TVP23B-202ENST00000476139 H7C1H1 209 aa12.28□□□□□ -0.44
TVP23B-202ENST00000476139 SAMD5Q5TGI4 173 aa12.28□□□□□ -0.44
TVP23B-202ENST00000476139 TOMM6Q96B49 74 aa12.28□□□□□ -0.44
TVP23B-202ENST00000476139 ESM1Q9NQ30 184 aa12.28□□□□□ -0.44
TVP23B-202ENST00000476139 DUSP14O95147 198 aaKnown RBP12.28□□□□□ -0.44
TVP23B-202ENST00000476139 C4orf3Q8WVX3 66 aa12.28□□□□□ -0.44
TVP23B-202ENST00000476139 DNAJC9-AS1A6NH13 148 aa12.27□□□□□ -0.44
TVP23B-202ENST00000476139 K7EP34 96 aa12.27□□□□□ -0.44
TVP23B-202ENST00000476139 BAALCQ8WXS3 180 aa12.27□□□□□ -0.45
TVP23B-202ENST00000476139 PRSS29PA6NIE9 313 aa12.27□□□□□ -0.45
TVP23B-202ENST00000476139 RPL39P62891 51 aaKnown RBP12.27□□□□□ -0.45
TVP23B-202ENST00000476139 CEND1Q8N111 149 aa12.27□□□□□ -0.45
TVP23B-202ENST00000476139 A0A1W2PRX2 142 aa12.26□□□□□ -0.45
TVP23B-202ENST00000476139 NEXN-AS1Q8NBZ9 246 aa12.26□□□□□ -0.45
TVP23B-202ENST00000476139 HIST1H4GQ99525 98 aa12.26□□□□□ -0.45
TVP23B-202ENST00000476139 HIGD1BQ9P298 99 aa12.26□□□□□ -0.45
TVP23B-202ENST00000476139 PLNP26678 52 aa12.26□□□□□ -0.45
TVP23B-202ENST00000476139 CRYGDP07320 174 aa12.25□□□□□ -0.45
TVP23B-202ENST00000476139 RBMY1BA6NDE4 496 aaKnown RBP12.25□□□□□ -0.45
TVP23B-202ENST00000476139 RBMY1EA6NEQ0 496 aaKnown RBP12.25□□□□□ -0.45
TVP23B-202ENST00000476139 RBMY1DP0C7P1 496 aaKnown RBP12.25□□□□□ -0.45
TVP23B-202ENST00000476139 FABP2P12104 132 aa12.25□□□□□ -0.45
TVP23B-202ENST00000476139 HLA-DRB4P13762 266 aa12.25□□□□□ -0.45
TVP23B-202ENST00000476139 ZNF876PQ49A33 203 aa12.25□□□□□ -0.45
TVP23B-202ENST00000476139 PEMTQ9UBM1 199 aa12.25□□□□□ -0.45
TVP23B-202ENST00000476139 HLA-DRB4X5D2U9 266 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms