RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 SMIM27A0A1W2PRY6 76 aa13.99□□□□□ -0.17
APP-215ENST00000474136 PLAC8L1A1L4L8 177 aa13.99□□□□□ -0.17
APP-215ENST00000474136 F2Z2F3 143 aa13.99□□□□□ -0.17
APP-215ENST00000474136 AZU1P20160 251 aa13.99□□□□□ -0.17
APP-215ENST00000474136 S100A4P26447 101 aaKnown RBP13.99□□□□□ -0.17
APP-215ENST00000474136 Q6ZQT7 251 aa13.99□□□□□ -0.17
APP-215ENST00000474136 BTF3L4Q96K17 158 aa13.99□□□□□ -0.17
APP-215ENST00000474136 SMCO4Q9NRQ5 59 aa13.99□□□□□ -0.17
APP-215ENST00000474136 NAT8BQ9UHF3 227 aa13.99□□□□□ -0.17
APP-215ENST00000474136 TRAV9-1A0A075B6T8 112 aa13.98□□□□□ -0.17
APP-215ENST00000474136 TMSB15BA0A087X1C1 80 aa13.98□□□□□ -0.17
APP-215ENST00000474136 ATP5G1P05496 136 aa13.98□□□□□ -0.17
APP-215ENST00000474136 FUSP35637 526 aaKnown RBP eCLIP13.98□□□□□ -0.17
APP-215ENST00000474136 TP53TG3Q9ULZ0 132 aa13.98□□□□□ -0.17
APP-215ENST00000474136 TYMSP04818 313 aa13.97□□□□□ -0.17
APP-215ENST00000474136 BTF3P20290 206 aaKnown RBP13.97□□□□□ -0.17
APP-215ENST00000474136 ATRAIDQ6UW56 229 aa13.97□□□□□ -0.17
APP-215ENST00000474136 FER1L6-AS1Q8NA97 138 aa13.97□□□□□ -0.17
APP-215ENST00000474136 BORCS7Q96B45 105 aa13.97□□□□□ -0.17
APP-215ENST00000474136 GNRH2O43555 120 aa13.96□□□□□ -0.17
APP-215ENST00000474136 OR5AL1P0C617 328 aa13.96□□□□□ -0.17
APP-215ENST00000474136 HTN1P15515 57 aa13.96□□□□□ -0.17
APP-215ENST00000474136 ZNF415Q09FC8 603 aa13.96□□□□□ -0.17
APP-215ENST00000474136 TMEM263Q8WUH6 116 aaKnown RBP13.96□□□□□ -0.17
APP-215ENST00000474136 C16orf74Q96GX8 76 aa13.96□□□□□ -0.17
APP-215ENST00000474136 GRIFINA4D1Z8 144 aa13.95□□□□□ -0.18
APP-215ENST00000474136 HIGD1CA8MV81 97 aa13.95□□□□□ -0.18
APP-215ENST00000474136 TTC32Q5I0X7 151 aa13.95□□□□□ -0.18
APP-215ENST00000474136 WDR73Q6P4I2 378 aa13.95□□□□□ -0.18
APP-215ENST00000474136 SPXQ9BT56 116 aa13.95□□□□□ -0.18
APP-215ENST00000474136 SSBP4Q9BWG4 385 aaPredicted RBP13.95□□□□□ -0.18
APP-215ENST00000474136 FLG2Q5D862 2391 aaPredicted RBP13.95□□□□□ -0.18
APP-215ENST00000474136 IGHV3-16A0A0C4DH30 117 aa13.94□□□□□ -0.18
APP-215ENST00000474136 IGLC6P0CF74 106 aa13.94□□□□□ -0.18
APP-215ENST00000474136 XGP55808 180 aa13.94□□□□□ -0.18
APP-215ENST00000474136 SNAI2O43623 268 aa13.93□□□□□ -0.18
APP-215ENST00000474136 ARMS2P0C7Q2 107 aa13.93□□□□□ -0.18
APP-215ENST00000474136 GZMBP10144 247 aa13.93□□□□□ -0.18
APP-215ENST00000474136 CACNG7P62955 275 aa13.93□□□□□ -0.18
APP-215ENST00000474136 Q5VSD8 79 aa13.93□□□□□ -0.18
APP-215ENST00000474136 GTSF1Q8WW33 167 aa13.93□□□□□ -0.18
APP-215ENST00000474136 CTRLP40313 264 aa13.92□□□□□ -0.18
APP-215ENST00000474136 NUP35Q8NFH5 326 aa13.92□□□□□ -0.18
APP-215ENST00000474136 RNASE8Q8TDE3 154 aaKnown RBP13.92□□□□□ -0.18
APP-215ENST00000474136 TPPP3Q9BW30 176 aa13.92□□□□□ -0.18
APP-215ENST00000474136 PHLDA3Q9Y5J5 127 aa13.92□□□□□ -0.18
APP-215ENST00000474136 A0A1B0GUT8 65 aa13.91□□□□□ -0.18
APP-215ENST00000474136 A0A1B0GW15 77 aa13.91□□□□□ -0.18
APP-215ENST00000474136 SNURFLB1AK76 121 aa13.91□□□□□ -0.18
APP-215ENST00000474136 RNASE3P12724 160 aaKnown RBP13.91□□□□□ -0.18
APP-215ENST00000474136 TCL1AP56279 114 aa13.91□□□□□ -0.18
APP-215ENST00000474136 PIK3CD-AS1Q5SR53 167 aa13.91□□□□□ -0.18
APP-215ENST00000474136 LYZL1Q6UWQ5 148 aa13.91□□□□□ -0.18
APP-215ENST00000474136 PGLYRP4Q96LB8 373 aa13.91□□□□□ -0.18
APP-215ENST00000474136 C9orf85Q96MD7 179 aa13.91□□□□□ -0.18
APP-215ENST00000474136 CNFNQ9BYD5 112 aa13.91□□□□□ -0.18
APP-215ENST00000474136 MDFICQ9P1T7 246 aa13.91□□□□□ -0.18
APP-215ENST00000474136 H3BVH4 76 aa13.9□□□□□ -0.18
APP-215ENST00000474136 S100A8P05109 93 aa13.9□□□□□ -0.18
APP-215ENST00000474136 RIGQ13278 110 aa13.9□□□□□ -0.18
APP-215ENST00000474136 ESRGQ1W209 222 aa13.9□□□□□ -0.18
APP-215ENST00000474136 ATP5L2Q7Z4Y8 100 aa13.9□□□□□ -0.18
APP-215ENST00000474136 SYT8Q8NBV8 401 aa13.9□□□□□ -0.18
APP-215ENST00000474136 PTH2Q96A98 100 aa13.9□□□□□ -0.18
APP-215ENST00000474136 URGCP-MRPS24S4R325 110 aa13.9□□□□□ -0.18
APP-215ENST00000474136 TRAV26-1A0A087WT03 109 aa13.9□□□□□ -0.19
APP-215ENST00000474136 A0A0J9YY99 117 aa13.9□□□□□ -0.19
APP-215ENST00000474136 DAZ2Q13117 558 aaKnown RBP13.9□□□□□ -0.19
APP-215ENST00000474136 SPANXN1Q5VSR9 72 aa13.9□□□□□ -0.19
APP-215ENST00000474136 RASL11AQ6T310 242 aa13.9□□□□□ -0.19
APP-215ENST00000474136 C11orf72Q8NBR9 251 aa13.9□□□□□ -0.19
APP-215ENST00000474136 UPK3BQ9BT76 320 aa13.9□□□□□ -0.19
APP-215ENST00000474136 TRBV24-1A0A075B6N3 115 aa13.89□□□□□ -0.19
APP-215ENST00000474136 M0R2P5 195 aa13.89□□□□□ -0.19
APP-215ENST00000474136 LINC00315P59091 139 aa13.89□□□□□ -0.19
APP-215ENST00000474136 ELOBQ15370 118 aa13.89□□□□□ -0.19
APP-215ENST00000474136 COX19Q49B96 90 aa13.89□□□□□ -0.19
APP-215ENST00000474136 ZFP82Q8N141 532 aa13.89□□□□□ -0.19
APP-215ENST00000474136 NOP10Q9NPE3 64 aaKnown RBP13.89□□□□□ -0.19
APP-215ENST00000474136 GSN-AS1Q9NRJ2 163 aa13.89□□□□□ -0.19
APP-215ENST00000474136 TIMM8BQ9Y5J9 83 aaPredicted RBP13.89□□□□□ -0.19
APP-215ENST00000474136 Q6ZRN7 208 aaPredicted RBP13.88□□□□□ -0.19
APP-215ENST00000474136 CBLN2Q8IUK8 224 aa13.88□□□□□ -0.19
APP-215ENST00000474136 FRZBQ92765 325 aa13.88□□□□□ -0.19
APP-215ENST00000474136 SMIM15Q7Z3B0 74 aa13.87□□□□□ -0.19
APP-215ENST00000474136 PGPEP1Q9NXJ5 209 aa13.87□□□□□ -0.19
APP-215ENST00000474136 MRPS16Q9Y3D3 137 aaKnown RBP13.87□□□□□ -0.19
APP-215ENST00000474136 HOXA5P20719 270 aa13.86□□□□□ -0.19
APP-215ENST00000474136 NTF3P20783 257 aa13.86□□□□□ -0.19
APP-215ENST00000474136 TWIST1Q15672 202 aa13.86□□□□□ -0.19
APP-215ENST00000474136 SCO1O75880 301 aa13.85□□□□□ -0.19
APP-215ENST00000474136 NXPH4O95158 308 aa13.85□□□□□ -0.19
APP-215ENST00000474136 TRGC1P0CF51 173 aa13.85□□□□□ -0.19
APP-215ENST00000474136 HBBP68871 147 aa13.85□□□□□ -0.19
APP-215ENST00000474136 ZNF876PQ49A33 203 aa13.85□□□□□ -0.19
APP-215ENST00000474136 OR10AG1Q8NH19 301 aa13.85□□□□□ -0.19
APP-215ENST00000474136 M0R381 172 aa13.84□□□□□ -0.19
APP-215ENST00000474136 SMR3BP02814 79 aaPredicted RBP13.84□□□□□ -0.19
APP-215ENST00000474136 KRTAP10-1P60331 282 aa13.84□□□□□ -0.19
APP-215ENST00000474136 RASL10AQ92737 203 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms