RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 MBD3L2Q8NHZ7 208 aaPredicted RBP6.07□□□□□ -1.44
TPM3-215ENST00000469717 TMEM126AQ9H061 195 aa6.07□□□□□ -1.44
TPM3-215ENST00000469717 TRAV8-2A0A0B4J237 113 aa6.07□□□□□ -1.44
TPM3-215ENST00000469717 EIF4EBP3O60516 100 aaPredicted RBP6.07□□□□□ -1.44
TPM3-215ENST00000469717 CCL19Q99731 98 aa6.07□□□□□ -1.44
TPM3-215ENST00000469717 SMIM2Q9BVW6 85 aa6.07□□□□□ -1.44
TPM3-215ENST00000469717 A8MWV9 139 aa6.07□□□□□ -1.44
TPM3-215ENST00000469717 DUSP14O95147 198 aaKnown RBP6.07□□□□□ -1.44
TPM3-215ENST00000469717 RPL7P18124 248 aaKnown RBP6.07□□□□□ -1.44
TPM3-215ENST00000469717 LINC01559Q495D7 138 aa6.07□□□□□ -1.44
TPM3-215ENST00000469717 IGFL3Q6UXB1 125 aa6.07□□□□□ -1.44
TPM3-215ENST00000469717 COX8CQ7Z4L0 72 aa6.07□□□□□ -1.44
TPM3-215ENST00000469717 C11orf86A6NJI1 115 aa6.06□□□□□ -1.44
TPM3-215ENST00000469717 CTSGP08311 255 aa6.06□□□□□ -1.44
TPM3-215ENST00000469717 C14orf178Q8N769 122 aaPredicted RBP6.06□□□□□ -1.44
TPM3-215ENST00000469717 Q8NA96 180 aa6.06□□□□□ -1.44
TPM3-215ENST00000469717 OR11H6Q8NGC7 330 aa6.06□□□□□ -1.44
TPM3-215ENST00000469717 C21orf62Q9NYP8 219 aa6.06□□□□□ -1.44
TPM3-215ENST00000469717 VPS13CQ709C8 3753 aa6.06□□□□□ -1.44
TPM3-215ENST00000469717 C2orf66Q6UXQ4 117 aa6.06□□□□□ -1.44
TPM3-215ENST00000469717 MRAPQ8TCY5 172 aa6.06□□□□□ -1.44
TPM3-215ENST00000469717 CSMD2Q7Z408 3487 aa6.06□□□□□ -1.44
TPM3-215ENST00000469717 MUC4Q99102 2169 aa6.06□□□□□ -1.44
TPM3-215ENST00000469717 IGHV3-64A0A075B6Q5 118 aa6.06□□□□□ -1.44
TPM3-215ENST00000469717 F5H768 121 aa6.06□□□□□ -1.44
TPM3-215ENST00000469717 BEX4Q9NWD9 120 aaPredicted RBP6.06□□□□□ -1.44
TPM3-215ENST00000469717 USP24Q9UPU5 2620 aa6.06□□□□□ -1.44
TPM3-215ENST00000469717 A0A0J9YY99 117 aa6.05□□□□□ -1.44
TPM3-215ENST00000469717 CRYGDP07320 174 aa6.05□□□□□ -1.44
TPM3-215ENST00000469717 MGPP08493 103 aa6.05□□□□□ -1.44
TPM3-215ENST00000469717 CRYBG3Q68DQ2 2970 aa6.05□□□□□ -1.44
TPM3-215ENST00000469717 C8orf31Q8N9H6 132 aa6.05□□□□□ -1.44
TPM3-215ENST00000469717 FLNCQ14315 2725 aa6.05□□□□□ -1.44
TPM3-215ENST00000469717 IGLV11-55A0A075B6I3 123 aa6.05□□□□□ -1.44
TPM3-215ENST00000469717 RPL39P62891 51 aaKnown RBP6.05□□□□□ -1.44
TPM3-215ENST00000469717 PSMG4Q5JS54 123 aa6.05□□□□□ -1.44
TPM3-215ENST00000469717 NTN5Q8WTR8 489 aaPredicted RBP6.05□□□□□ -1.44
TPM3-215ENST00000469717 TEX49A0A1B0GTD5 131 aa6.05□□□□□ -1.44
TPM3-215ENST00000469717 SLC25A20O43772 301 aa6.05□□□□□ -1.44
TPM3-215ENST00000469717 NDUFV3P56181 108 aaKnown RBP6.05□□□□□ -1.44
TPM3-215ENST00000469717 OR13C6PQ8NH95 151 aa6.05□□□□□ -1.44
TPM3-215ENST00000469717 DNAJC30Q96LL9 226 aa6.05□□□□□ -1.44
TPM3-215ENST00000469717 NBR2O15453 112 aa6.04□□□□□ -1.44
TPM3-215ENST00000469717 SUMO2P61956 95 aaKnown RBP6.04□□□□□ -1.44
TPM3-215ENST00000469717 ZNF672Q499Z4 452 aaPredicted RBP6.04□□□□□ -1.44
TPM3-215ENST00000469717 FAM159AQ6UWV7 190 aa6.04□□□□□ -1.44
TPM3-215ENST00000469717 CENPVL3A0A0U1RRI6 287 aa6.04□□□□□ -1.44
TPM3-215ENST00000469717 TSHBP01222 138 aa6.04□□□□□ -1.44
TPM3-215ENST00000469717 LY6EQ16553 131 aa6.04□□□□□ -1.44
TPM3-215ENST00000469717 TOMM6Q96B49 74 aa6.04□□□□□ -1.44
TPM3-215ENST00000469717 ANKRD17O75179 2603 aaKnown RBP6.04□□□□□ -1.44
TPM3-215ENST00000469717 ATRQ13535 2644 aa6.04□□□□□ -1.44
TPM3-215ENST00000469717 RNF223E7ERA6 249 aa6.04□□□□□ -1.44
TPM3-215ENST00000469717 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.04□□□□□ -1.44
TPM3-215ENST00000469717 SETXQ7Z333 2677 aaKnown RBP6.04□□□□□ -1.44
TPM3-215ENST00000469717 TRAV12-1A0A0B4J245 112 aa6.03□□□□□ -1.44
TPM3-215ENST00000469717 IGHV4-39P01824 125 aa6.03□□□□□ -1.44
TPM3-215ENST00000469717 RPL11P62913 178 aaKnown RBP6.03□□□□□ -1.44
TPM3-215ENST00000469717 GAGE2BQ13066 116 aa6.03□□□□□ -1.44
TPM3-215ENST00000469717 GAGE2EQ4V326 116 aa6.03□□□□□ -1.44
TPM3-215ENST00000469717 OPRPNQ99935 248 aaPredicted RBP6.03□□□□□ -1.44
TPM3-215ENST00000469717 GAGE2DQ9UEU5 116 aa6.03□□□□□ -1.44
TPM3-215ENST00000469717 ZNF580Q9UK33 172 aa6.03□□□□□ -1.44
TPM3-215ENST00000469717 IGLV4-69A0A075B6H9 119 aa6.03□□□□□ -1.44
TPM3-215ENST00000469717 RHODO00212 210 aa6.03□□□□□ -1.44
TPM3-215ENST00000469717 IGHV3-30P01768 117 aa6.03□□□□□ -1.44
TPM3-215ENST00000469717 IGHV3-30-5P0DP03 117 aa6.03□□□□□ -1.44
TPM3-215ENST00000469717 TMEM170BQ5T4T1 132 aa6.03□□□□□ -1.44
TPM3-215ENST00000469717 C10orf126Q8N4M7 172 aa6.03□□□□□ -1.44
TPM3-215ENST00000469717 TTC32Q5I0X7 151 aa6.03□□□□□ -1.44
TPM3-215ENST00000469717 JPT2Q9H910 190 aa6.03□□□□□ -1.44
TPM3-215ENST00000469717 MAST4O15021 2626 aa6.03□□□□□ -1.44
TPM3-215ENST00000469717 LINC01619G3V211 115 aa6.02□□□□□ -1.44
TPM3-215ENST00000469717 SEC61GP60059 68 aa6.02□□□□□ -1.44
TPM3-215ENST00000469717 IGKV3-7A0A075B6H7 116 aa6.02□□□□□ -1.45
TPM3-215ENST00000469717 E7EQL1 145 aa6.02□□□□□ -1.45
TPM3-215ENST00000469717 SNCGO76070 127 aa6.02□□□□□ -1.45
TPM3-215ENST00000469717 SRD5A1P18405 259 aa6.02□□□□□ -1.45
TPM3-215ENST00000469717 MRPL23Q16540 153 aaKnown RBP6.02□□□□□ -1.45
TPM3-215ENST00000469717 Q8N1Y9 231 aa6.02□□□□□ -1.45
TPM3-215ENST00000469717 NUP37Q8NFH4 326 aa6.02□□□□□ -1.45
TPM3-215ENST00000469717 ADARB2-AS1A8MUL3 147 aa6.02□□□□□ -1.45
TPM3-215ENST00000469717 LY6LH3BQJ8 138 aa6.02□□□□□ -1.45
TPM3-215ENST00000469717 Q6ZSV7 163 aa6.02□□□□□ -1.45
TPM3-215ENST00000469717 SBSPONQ8IVN8 264 aa6.02□□□□□ -1.45
TPM3-215ENST00000469717 F8P00451 2351 aa6.02□□□□□ -1.45
TPM3-215ENST00000469717 BUB3O43684 328 aa6.02□□□□□ -1.45
TPM3-215ENST00000469717 ZNRF2Q8NHG8 242 aa6.02□□□□□ -1.45
TPM3-215ENST00000469717 ODF3Q96PU9 254 aa6.02□□□□□ -1.45
TPM3-215ENST00000469717 PRO1854Q9UHT4 67 aa6.02□□□□□ -1.45
TPM3-215ENST00000469717 TP53TG1Q9Y2A0 90 aa6.02□□□□□ -1.45
TPM3-215ENST00000469717 TRAV2A0A0B4J234 112 aa6.01□□□□□ -1.45
TPM3-215ENST00000469717 ECSCRQ19T08 205 aa6.01□□□□□ -1.45
TPM3-215ENST00000469717 IGSF10Q6WRI0 2623 aa6.01□□□□□ -1.45
TPM3-215ENST00000469717 J3QKU1 62 aa6.01□□□□□ -1.45
TPM3-215ENST00000469717 GNRH2O43555 120 aa6.01□□□□□ -1.45
TPM3-215ENST00000469717 C15orf32Q32M92 178 aa6.01□□□□□ -1.45
TPM3-215ENST00000469717 CLPSL1A2RUU4 121 aa6.01□□□□□ -1.45
TPM3-215ENST00000469717 F6UB75 175 aa6.01□□□□□ -1.45
TPM3-215ENST00000469717 ORMDL2Q53FV1 153 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms