RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 C9orf47Q6ZRZ4 202 aa7.28□□□□□ -1.24
HDAC3-205ENST00000469550 Q8N6K4 173 aa7.28□□□□□ -1.24
HDAC3-205ENST00000469550 SCGB3A1Q96QR1 104 aa7.28□□□□□ -1.24
HDAC3-205ENST00000469550 ZFAND3Q9H8U3 227 aa7.28□□□□□ -1.24
HDAC3-205ENST00000469550 ESM1Q9NQ30 184 aa7.28□□□□□ -1.24
HDAC3-205ENST00000469550 PGPEP1Q9NXJ5 209 aa7.28□□□□□ -1.24
HDAC3-205ENST00000469550 ONECUT1Q9UBC0 465 aa7.28□□□□□ -1.24
HDAC3-205ENST00000469550 M0R1W7 72 aa7.27□□□□□ -1.25
HDAC3-205ENST00000469550 CRYBA4P53673 196 aa7.27□□□□□ -1.25
HDAC3-205ENST00000469550 UBE2D3P61077 147 aa7.27□□□□□ -1.25
HDAC3-205ENST00000469550 UBE2D2P62837 147 aa7.27□□□□□ -1.25
HDAC3-205ENST00000469550 NDPQ00604 133 aa7.27□□□□□ -1.25
HDAC3-205ENST00000469550 TMEM78Q5T7P6 136 aa7.27□□□□□ -1.25
HDAC3-205ENST00000469550 SPANXN1Q5VSR9 72 aa7.27□□□□□ -1.25
HDAC3-205ENST00000469550 CLUHP3Q96NS8 147 aa7.27□□□□□ -1.25
HDAC3-205ENST00000469550 GEMIN7Q9H840 131 aaKnown RBP7.27□□□□□ -1.25
HDAC3-205ENST00000469550 LENEPQ9Y5L5 61 aa7.27□□□□□ -1.25
HDAC3-205ENST00000469550 HES1Q14469 280 aa7.26□□□□□ -1.25
HDAC3-205ENST00000469550 SBSPONQ8IVN8 264 aa7.26□□□□□ -1.25
HDAC3-205ENST00000469550 SYT8Q8NBV8 401 aa7.26□□□□□ -1.25
HDAC3-205ENST00000469550 PPDPFLQ8WWR9 84 aa7.26□□□□□ -1.25
HDAC3-205ENST00000469550 UFC1Q9Y3C8 167 aa7.26□□□□□ -1.25
HDAC3-205ENST00000469550 WNK2Q9Y3S1 2297 aa7.26□□□□□ -1.25
HDAC3-205ENST00000469550 AGRNO00468 2067 aa7.26□□□□□ -1.25
HDAC3-205ENST00000469550 TRBV20-1A0A075B6N2 111 aa7.26□□□□□ -1.25
HDAC3-205ENST00000469550 TRAV26-2A0A0B4J265 109 aa7.26□□□□□ -1.25
HDAC3-205ENST00000469550 LINC01549A6NIU2 74 aa7.26□□□□□ -1.25
HDAC3-205ENST00000469550 M0R381 172 aa7.26□□□□□ -1.25
HDAC3-205ENST00000469550 IGHV3-23P01764 117 aa7.26□□□□□ -1.25
HDAC3-205ENST00000469550 PRTN3P24158 256 aa7.26□□□□□ -1.25
HDAC3-205ENST00000469550 SUMO2P61956 95 aaKnown RBP7.26□□□□□ -1.25
HDAC3-205ENST00000469550 SHISA2Q6UWI4 295 aa7.26□□□□□ -1.25
HDAC3-205ENST00000469550 PRADC1Q9BSG0 188 aa7.26□□□□□ -1.25
HDAC3-205ENST00000469550 TRAV26-1A0A087WT03 109 aa7.25□□□□□ -1.25
HDAC3-205ENST00000469550 TRAV8-2A0A0B4J237 113 aa7.25□□□□□ -1.25
HDAC3-205ENST00000469550 PPP1R17O96001 155 aa7.25□□□□□ -1.25
HDAC3-205ENST00000469550 CD7P09564 240 aa7.25□□□□□ -1.25
HDAC3-205ENST00000469550 SPINK8P0C7L1 97 aa7.25□□□□□ -1.25
HDAC3-205ENST00000469550 ZFP36P26651 326 aaKnown RBP7.25□□□□□ -1.25
HDAC3-205ENST00000469550 PAPPA-AS1Q5QFB9 102 aa7.25□□□□□ -1.25
HDAC3-205ENST00000469550 NFE4Q86UQ8 179 aa7.25□□□□□ -1.25
HDAC3-205ENST00000469550 TEN1Q86WV5 123 aa7.25□□□□□ -1.25
HDAC3-205ENST00000469550 RNF182Q8N6D2 247 aa7.25□□□□□ -1.25
HDAC3-205ENST00000469550 FAM110DQ8TAY7 271 aaPredicted RBP7.25□□□□□ -1.25
HDAC3-205ENST00000469550 BAALCQ8WXS3 180 aa7.25□□□□□ -1.25
HDAC3-205ENST00000469550 ARHGAP32A7KAX9 2087 aa7.25□□□□□ -1.25
HDAC3-205ENST00000469550 IGHV7-81A0A0B4J1V7 117 aa7.24□□□□□ -1.25
HDAC3-205ENST00000469550 CLPSL1A2RUU4 121 aa7.24□□□□□ -1.25
HDAC3-205ENST00000469550 ZNF815PA8K554 130 aa7.24□□□□□ -1.25
HDAC3-205ENST00000469550 TSPAN13O95857 204 aa7.24□□□□□ -1.25
HDAC3-205ENST00000469550 C1orf122Q6ZSJ8 110 aa7.24□□□□□ -1.25
HDAC3-205ENST00000469550 Q6ZUT4 128 aa7.24□□□□□ -1.25
HDAC3-205ENST00000469550 PRSS29PA6NIE9 313 aa7.24□□□□□ -1.25
HDAC3-205ENST00000469550 RNASE1P07998 156 aaKnown RBP7.24□□□□□ -1.25
HDAC3-205ENST00000469550 MED14OSP0DP75 135 aa7.24□□□□□ -1.25
HDAC3-205ENST00000469550 MINOS1Q5TGZ0 78 aa7.24□□□□□ -1.25
HDAC3-205ENST00000469550 C2orf66Q6UXQ4 117 aa7.24□□□□□ -1.25
HDAC3-205ENST00000469550 C9orf139Q6ZV77 190 aa7.24□□□□□ -1.25
HDAC3-205ENST00000469550 RASL10AQ92737 203 aa7.24□□□□□ -1.25
HDAC3-205ENST00000469550 DPH3P1Q9H4G8 78 aa7.24□□□□□ -1.25
HDAC3-205ENST00000469550 MINOS1-NBL1R4GNA1 71 aa7.24□□□□□ -1.25
HDAC3-205ENST00000469550 U3KQE9 123 aa7.24□□□□□ -1.25
HDAC3-205ENST00000469550 IGHV1-69DA0A0B4J2H0 117 aa7.23□□□□□ -1.25
HDAC3-205ENST00000469550 DNAJC9-AS1A6NH13 148 aa7.23□□□□□ -1.25
HDAC3-205ENST00000469550 M0QXV9 152 aa7.23□□□□□ -1.25
HDAC3-205ENST00000469550 PSMB2P49721 201 aa7.23□□□□□ -1.25
HDAC3-205ENST00000469550 RPL32P62910 135 aaKnown RBP7.23□□□□□ -1.25
HDAC3-205ENST00000469550 SRSF9Q13242 221 aaKnown RBP eCLIP7.23□□□□□ -1.25
HDAC3-205ENST00000469550 SCGB1D4Q6XE38 83 aa7.23□□□□□ -1.25
HDAC3-205ENST00000469550 TMEM262E9PQX1 116 aa7.22□□□□□ -1.25
HDAC3-205ENST00000469550 CLEC3BP05452 202 aa7.22□□□□□ -1.25
HDAC3-205ENST00000469550 C15orf32Q32M92 178 aa7.22□□□□□ -1.25
HDAC3-205ENST00000469550 NDUFA11Q86Y39 141 aa7.22□□□□□ -1.25
HDAC3-205ENST00000469550 POM121L12Q8N7R1 296 aa7.22□□□□□ -1.25
HDAC3-205ENST00000469550 CARD19Q96LW7 228 aa7.22□□□□□ -1.25
HDAC3-205ENST00000469550 MGAM2Q2M2H8 2515 aa7.22□□□□□ -1.25
HDAC3-205ENST00000469550 MEGF8Q7Z7M0 2845 aa7.22□□□□□ -1.25
HDAC3-205ENST00000469550 LOC107984156A0A0G2JMH3 177 aa7.22□□□□□ -1.25
HDAC3-205ENST00000469550 A0A0J9YY99 117 aa7.22□□□□□ -1.25
HDAC3-205ENST00000469550 H3BVH4 76 aa7.22□□□□□ -1.25
HDAC3-205ENST00000469550 MT-ATP8P03928 68 aa7.22□□□□□ -1.25
HDAC3-205ENST00000469550 XGP55808 180 aa7.22□□□□□ -1.25
HDAC3-205ENST00000469550 HERVK_113P61574 105 aa7.22□□□□□ -1.25
HDAC3-205ENST00000469550 ZFP2Q6ZN57 461 aa7.22□□□□□ -1.25
HDAC3-205ENST00000469550 VMO1Q7Z5L0 202 aa7.22□□□□□ -1.25
HDAC3-205ENST00000469550 ARL17AQ8IVW1 177 aa7.22□□□□□ -1.25
HDAC3-205ENST00000469550 PLEKHB2Q96CS7 222 aa7.22□□□□□ -1.25
HDAC3-205ENST00000469550 LINC00477Q96M19 166 aa7.22□□□□□ -1.25
HDAC3-205ENST00000469550 A8MWV9 139 aa7.21□□□□□ -1.26
HDAC3-205ENST00000469550 FHL3Q13643 280 aa7.21□□□□□ -1.26
HDAC3-205ENST00000469550 Q8N9W7 124 aa7.21□□□□□ -1.26
HDAC3-205ENST00000469550 METTL26Q96S19 204 aa7.21□□□□□ -1.26
HDAC3-205ENST00000469550 ERG28Q9UKR5 140 aa7.21□□□□□ -1.26
HDAC3-205ENST00000469550 IGHV3OR16-8A0A075B7F1 116 aa7.2□□□□□ -1.26
HDAC3-205ENST00000469550 TRAV21A0A0B4J279 112 aa7.2□□□□□ -1.26
HDAC3-205ENST00000469550 ZNF688P0C7X2 276 aa7.2□□□□□ -1.26
HDAC3-205ENST00000469550 C10orf126Q8N4M7 172 aa7.2□□□□□ -1.26
HDAC3-205ENST00000469550 WFDC12Q8WWY7 111 aa7.2□□□□□ -1.26
HDAC3-205ENST00000469550 KLK15Q9H2R5 256 aa7.2□□□□□ -1.26
HDAC3-205ENST00000469550 TRBV7-1A0A0A6YYK4 115 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms