RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 M0R2N4 97 aa13.29□□□□□ -0.28
USP11-205ENST00000467378 NXPH4O95158 308 aa13.29□□□□□ -0.28
USP11-205ENST00000467378 SAMD10Q9BYL1 202 aa13.29□□□□□ -0.28
USP11-205ENST00000467378 OSTCQ9NRP0 149 aa13.29□□□□□ -0.28
USP11-205ENST00000467378 MUC21A0A0G2JKD1 596 aa13.28□□□□□ -0.28
USP11-205ENST00000467378 MUC21A0A140T8X8 626 aa13.28□□□□□ -0.28
USP11-205ENST00000467378 PAX4O43316 350 aa13.28□□□□□ -0.28
USP11-205ENST00000467378 NUDT3O95989 172 aa13.28□□□□□ -0.28
USP11-205ENST00000467378 GATA1P15976 413 aaPredicted RBP13.28□□□□□ -0.28
USP11-205ENST00000467378 UFSP1Q6NVU6 142 aa13.28□□□□□ -0.28
USP11-205ENST00000467378 IGHV3-73A0A0B4J1V6 119 aa13.27□□□□□ -0.29
USP11-205ENST00000467378 A0A1W2PPQ1 181 aa13.27□□□□□ -0.29
USP11-205ENST00000467378 ADIRFQ15847 76 aa13.27□□□□□ -0.29
USP11-205ENST00000467378 CT83Q5H943 113 aa13.27□□□□□ -0.29
USP11-205ENST00000467378 SPANXN1Q5VSR9 72 aa13.27□□□□□ -0.29
USP11-205ENST00000467378 UQCC3Q6UW78 93 aa13.27□□□□□ -0.29
USP11-205ENST00000467378 LYZL1Q6UWQ5 148 aa13.27□□□□□ -0.29
USP11-205ENST00000467378 ZFP2Q6ZN57 461 aa13.27□□□□□ -0.29
USP11-205ENST00000467378 LINC00862A6NCI5 91 aa13.26□□□□□ -0.29
USP11-205ENST00000467378 A8MWL6 223 aa13.26□□□□□ -0.29
USP11-205ENST00000467378 F2Z2F3 143 aa13.26□□□□□ -0.29
USP11-205ENST00000467378 CRYGDP07320 174 aa13.26□□□□□ -0.29
USP11-205ENST00000467378 GTSF1Q8WW33 167 aa13.26□□□□□ -0.29
USP11-205ENST00000467378 TPPP3Q9BW30 176 aa13.26□□□□□ -0.29
USP11-205ENST00000467378 V9GYV3 84 aa13.25□□□□□ -0.29
USP11-205ENST00000467378 A0A096LPF7 62 aa13.24□□□□□ -0.29
USP11-205ENST00000467378 CTRLP40313 264 aa13.24□□□□□ -0.29
USP11-205ENST00000467378 FOXA3P55318 350 aaPredicted RBP13.24□□□□□ -0.29
USP11-205ENST00000467378 SSTP61278 116 aa13.24□□□□□ -0.29
USP11-205ENST00000467378 CACNG7P62955 275 aa13.24□□□□□ -0.29
USP11-205ENST00000467378 WDR73Q6P4I2 378 aa13.24□□□□□ -0.29
USP11-205ENST00000467378 Q6ZSN1 163 aa13.24□□□□□ -0.29
USP11-205ENST00000467378 COMMD7Q86VX2 200 aa13.24□□□□□ -0.29
USP11-205ENST00000467378 MAPKAPK5-AS1Q8N8E1 139 aa13.24□□□□□ -0.29
USP11-205ENST00000467378 C15orf54Q8N8G6 183 aa13.24□□□□□ -0.29
USP11-205ENST00000467378 SLC25A29Q8N8R3 303 aa13.24□□□□□ -0.29
USP11-205ENST00000467378 MSRB1Q9NZV6 116 aa13.24□□□□□ -0.29
USP11-205ENST00000467378 A0A087WWL8 130 aa13.23□□□□□ -0.29
USP11-205ENST00000467378 TRBV6-4A0A1B0GX49 114 aa13.23□□□□□ -0.29
USP11-205ENST00000467378 RHODO00212 210 aa13.23□□□□□ -0.29
USP11-205ENST00000467378 P0DMU3 169 aa13.23□□□□□ -0.29
USP11-205ENST00000467378 FAM231AP0DMU4 169 aa13.23□□□□□ -0.29
USP11-205ENST00000467378 FAM231CP0DMU5 169 aa13.23□□□□□ -0.29
USP11-205ENST00000467378 OR10G8Q8NGN5 311 aa13.23□□□□□ -0.29
USP11-205ENST00000467378 HSPG2P98160 4391 aa13.22□□□□□ -0.29
USP11-205ENST00000467378 NTF3P20783 257 aa13.22□□□□□ -0.29
USP11-205ENST00000467378 FAM74A4Q5TZK3 123 aa13.22□□□□□ -0.29
USP11-205ENST00000467378 TSKUQ8WUA8 353 aa13.22□□□□□ -0.29
USP11-205ENST00000467378 CNFNQ9BYD5 112 aa13.22□□□□□ -0.29
USP11-205ENST00000467378 ICOSQ9Y6W8 199 aa13.22□□□□□ -0.29
USP11-205ENST00000467378 KIF25-AS1Q9Y6Z4 181 aa13.22□□□□□ -0.29
USP11-205ENST00000467378 LOC100131303A0A0U1RQF7 123 aa13.21□□□□□ -0.29
USP11-205ENST00000467378 TMEM218A2RU14 115 aa13.21□□□□□ -0.29
USP11-205ENST00000467378 K7EQD1 137 aa13.21□□□□□ -0.29
USP11-205ENST00000467378 GYPEP15421 78 aa13.21□□□□□ -0.29
USP11-205ENST00000467378 GFRA4Q9GZZ7 299 aa13.21□□□□□ -0.29
USP11-205ENST00000467378 FAM231BA6NCW3 169 aa13.2□□□□□ -0.3
USP11-205ENST00000467378 ADCYAP1P18509 176 aa13.2□□□□□ -0.3
USP11-205ENST00000467378 MRPL23Q16540 153 aaKnown RBP13.2□□□□□ -0.3
USP11-205ENST00000467378 RNF212Q495C1 297 aa13.2□□□□□ -0.3
USP11-205ENST00000467378 C14orf178Q8N769 122 aaPredicted RBP13.2□□□□□ -0.3
USP11-205ENST00000467378 LINC00315P59091 139 aa13.19□□□□□ -0.3
USP11-205ENST00000467378 PNRC1Q12796 327 aaPredicted RBP13.19□□□□□ -0.3
USP11-205ENST00000467378 RHOHQ15669 191 aa13.19□□□□□ -0.3
USP11-205ENST00000467378 ESRGQ1W209 222 aa13.19□□□□□ -0.3
USP11-205ENST00000467378 PGLYRP4Q96LB8 373 aa13.19□□□□□ -0.3
USP11-205ENST00000467378 AP1S3Q96PC3 154 aa13.19□□□□□ -0.3
USP11-205ENST00000467378 PRADC1Q9BSG0 188 aa13.19□□□□□ -0.3
USP11-205ENST00000467378 LINC00588Q9Y4M8 146 aa13.18□□□□□ -0.3
USP11-205ENST00000467378 HIGD1CA8MV81 97 aa13.17□□□□□ -0.3
USP11-205ENST00000467378 F8W036 122 aa13.17□□□□□ -0.3
USP11-205ENST00000467378 CCL18P55774 89 aa13.17□□□□□ -0.3
USP11-205ENST00000467378 RAB4BP61018 213 aa13.17□□□□□ -0.3
USP11-205ENST00000467378 TWIST1Q15672 202 aa13.17□□□□□ -0.3
USP11-205ENST00000467378 NEGR1Q7Z3B1 354 aa13.17□□□□□ -0.3
USP11-205ENST00000467378 Q9UF83 564 aa13.17□□□□□ -0.3
USP11-205ENST00000467378 SMIM27A0A1W2PRY6 76 aa13.16□□□□□ -0.3
USP11-205ENST00000467378 CDK2AP2O75956 126 aa13.16□□□□□ -0.3
USP11-205ENST00000467378 TRGC1P0CF51 173 aa13.16□□□□□ -0.3
USP11-205ENST00000467378 SMIM17P0DL12 118 aa13.16□□□□□ -0.3
USP11-205ENST00000467378 EVI2AP22794 236 aa13.16□□□□□ -0.3
USP11-205ENST00000467378 SRIP30626 198 aa13.16□□□□□ -0.3
USP11-205ENST00000467378 UBE2DNLQ8IWF7 75 aa13.16□□□□□ -0.3
USP11-205ENST00000467378 LYPD5Q6UWN5 251 aa13.15□□□□□ -0.3
USP11-205ENST00000467378 NUP35Q8NFH5 326 aa13.15□□□□□ -0.3
USP11-205ENST00000467378 SEC11CQ9BY50 192 aa13.15□□□□□ -0.3
USP11-205ENST00000467378 IGLV2-18A0A075B6J9 118 aa13.14□□□□□ -0.31
USP11-205ENST00000467378 C16orf90A8MZG2 172 aa13.14□□□□□ -0.31
USP11-205ENST00000467378 ZNF56Q15929 161 aa13.14□□□□□ -0.31
USP11-205ENST00000467378 DPH3P1Q9H4G8 78 aa13.14□□□□□ -0.31
USP11-205ENST00000467378 NAT8BQ9UHF3 227 aa13.14□□□□□ -0.31
USP11-205ENST00000467378 A0A1B0GUT8 65 aa13.13□□□□□ -0.31
USP11-205ENST00000467378 PPP1R2P9O14990 202 aa13.13□□□□□ -0.31
USP11-205ENST00000467378 LINC00694P0DN24 101 aa13.13□□□□□ -0.31
USP11-205ENST00000467378 FAM3BP58499 235 aaPredicted RBP13.13□□□□□ -0.31
USP11-205ENST00000467378 C10orf91Q5T1B1 145 aa13.13□□□□□ -0.31
USP11-205ENST00000467378 SH2D6Q7Z4S9 175 aa13.13□□□□□ -0.31
USP11-205ENST00000467378 TRBV10-1A0A0K0K1A3 114 aa13.12□□□□□ -0.31
USP11-205ENST00000467378 GAGE12JA6NER3 117 aa13.12□□□□□ -0.31
USP11-205ENST00000467378 F5H697 171 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms