RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 HSD52Q0P140 79 aa13.89□□□□□ -0.19
TSPAN4-210ENST00000464987 ORMDL2Q53FV1 153 aa13.89□□□□□ -0.19
TSPAN4-210ENST00000464987 POM121L12Q8N7R1 296 aa13.89□□□□□ -0.19
TSPAN4-210ENST00000464987 UBE2E2Q96LR5 201 aa13.89□□□□□ -0.19
TSPAN4-210ENST00000464987 Q96MF0 132 aa13.89□□□□□ -0.19
TSPAN4-210ENST00000464987 SLURP1P55000 103 aa13.88□□□□□ -0.19
TSPAN4-210ENST00000464987 SEC11AP67812 179 aa13.88□□□□□ -0.19
TSPAN4-210ENST00000464987 SAMD13Q5VXD3 122 aa13.88□□□□□ -0.19
TSPAN4-210ENST00000464987 SCGB3A1Q96QR1 104 aa13.88□□□□□ -0.19
TSPAN4-210ENST00000464987 MYO9AB2RTY4 2548 aa13.88□□□□□ -0.19
TSPAN4-210ENST00000464987 C2orf66Q6UXQ4 117 aa13.88□□□□□ -0.19
TSPAN4-210ENST00000464987 LGALS9O00182 355 aa13.87□□□□□ -0.19
TSPAN4-210ENST00000464987 SUMO4Q6EEV6 95 aa13.87□□□□□ -0.19
TSPAN4-210ENST00000464987 DUX3Q96PT4 197 aa13.87□□□□□ -0.19
TSPAN4-210ENST00000464987 NAA38Q9BRA0 125 aaKnown RBP13.87□□□□□ -0.19
TSPAN4-210ENST00000464987 SONP18583 2426 aaKnown RBP13.87□□□□□ -0.19
TSPAN4-210ENST00000464987 IGHV3-16A0A0C4DH30 117 aa13.87□□□□□ -0.19
TSPAN4-210ENST00000464987 Q8N1Y9 231 aa13.87□□□□□ -0.19
TSPAN4-210ENST00000464987 MAPKAPK5-AS1Q8N8E1 139 aa13.87□□□□□ -0.19
TSPAN4-210ENST00000464987 TCTEX1D4Q5JR98 221 aa13.86□□□□□ -0.19
TSPAN4-210ENST00000464987 FAM74A4Q5TZK3 123 aa13.86□□□□□ -0.19
TSPAN4-210ENST00000464987 NEXN-AS1Q8NBZ9 246 aa13.86□□□□□ -0.19
TSPAN4-210ENST00000464987 TRBV25-1A0A075B6N4 114 aa13.85□□□□□ -0.19
TSPAN4-210ENST00000464987 KRTAP1-3Q8IUG1 177 aa13.85□□□□□ -0.19
TSPAN4-210ENST00000464987 C9orf85Q96MD7 179 aa13.85□□□□□ -0.19
TSPAN4-210ENST00000464987 ODF3Q96PU9 254 aa13.85□□□□□ -0.19
TSPAN4-210ENST00000464987 F5H697 171 aa13.84□□□□□ -0.19
TSPAN4-210ENST00000464987 F8VRH5 84 aa13.84□□□□□ -0.19
TSPAN4-210ENST00000464987 RNF152Q8N8N0 203 aa13.84□□□□□ -0.19
TSPAN4-210ENST00000464987 BAALCQ8WXS3 180 aa13.84□□□□□ -0.19
TSPAN4-210ENST00000464987 ITPR3Q14573 2671 aa13.84□□□□□ -0.19
TSPAN4-210ENST00000464987 TRAV12-1A0A0B4J245 112 aa13.84□□□□□ -0.19
TSPAN4-210ENST00000464987 DUSP14O95147 198 aaKnown RBP13.84□□□□□ -0.19
TSPAN4-210ENST00000464987 RAB37Q96AX2 223 aa13.84□□□□□ -0.19
TSPAN4-210ENST00000464987 H7C1H1 209 aa13.83□□□□□ -0.2
TSPAN4-210ENST00000464987 AMTNQ6UX39 209 aa13.83□□□□□ -0.2
TSPAN4-210ENST00000464987 JMJD8Q96S16 334 aa13.83□□□□□ -0.2
TSPAN4-210ENST00000464987 CHAC1Q9BUX1 264 aa13.83□□□□□ -0.2
TSPAN4-210ENST00000464987 FASNP49327 2511 aaKnown RBP13.83□□□□□ -0.2
TSPAN4-210ENST00000464987 RBMY1A1P0DJD3 496 aaKnown RBP13.83□□□□□ -0.2
TSPAN4-210ENST00000464987 RBMY1CP0DJD4 496 aa13.83□□□□□ -0.2
TSPAN4-210ENST00000464987 POLR2KP53803 58 aaKnown RBP13.83□□□□□ -0.2
TSPAN4-210ENST00000464987 FXYD2P54710 66 aa13.83□□□□□ -0.2
TSPAN4-210ENST00000464987 RBMY1FQ15415 496 aaKnown RBP13.83□□□□□ -0.2
TSPAN4-210ENST00000464987 IGHV1OR15-1A0A075B7D0 117 aa13.82□□□□□ -0.2
TSPAN4-210ENST00000464987 A6NDN8 102 aa13.82□□□□□ -0.2
TSPAN4-210ENST00000464987 KNCNA6PVL3 124 aa13.82□□□□□ -0.2
TSPAN4-210ENST00000464987 H3BRM9 83 aa13.82□□□□□ -0.2
TSPAN4-210ENST00000464987 K7EMI3 77 aa13.82□□□□□ -0.2
TSPAN4-210ENST00000464987 HLA-DRB4P13762 266 aa13.82□□□□□ -0.2
TSPAN4-210ENST00000464987 GCSHP23434 173 aa13.82□□□□□ -0.2
TSPAN4-210ENST00000464987 PLNP26678 52 aa13.82□□□□□ -0.2
TSPAN4-210ENST00000464987 HLA-DRB4X5D2U9 266 aa13.82□□□□□ -0.2
TSPAN4-210ENST00000464987 NF1P21359 2839 aa13.81□□□□□ -0.2
TSPAN4-210ENST00000464987 GAGE12BA1L429 117 aa13.81□□□□□ -0.2
TSPAN4-210ENST00000464987 RPL39P62891 51 aaKnown RBP13.81□□□□□ -0.2
TSPAN4-210ENST00000464987 MORN3Q6PF18 240 aaPredicted RBP13.81□□□□□ -0.2
TSPAN4-210ENST00000464987 HIGD1BQ9P298 99 aa13.81□□□□□ -0.2
TSPAN4-210ENST00000464987 PRSS29PA6NIE9 313 aa13.8□□□□□ -0.2
TSPAN4-210ENST00000464987 H3BUT2 72 aa13.8□□□□□ -0.2
TSPAN4-210ENST00000464987 PPP1R17O96001 155 aa13.8□□□□□ -0.2
TSPAN4-210ENST00000464987 TSHBP01222 138 aa13.8□□□□□ -0.2
TSPAN4-210ENST00000464987 ZFP2Q6ZN57 461 aa13.8□□□□□ -0.2
TSPAN4-210ENST00000464987 FOXI2Q6ZQN5 318 aa13.8□□□□□ -0.2
TSPAN4-210ENST00000464987 OR11H1Q8NG94 326 aa13.8□□□□□ -0.2
TSPAN4-210ENST00000464987 WNK1Q9H4A3 2382 aa13.8□□□□□ -0.2
TSPAN4-210ENST00000464987 SDHAF1A6NFY7 115 aa13.8□□□□□ -0.2
TSPAN4-210ENST00000464987 C9orf118A6NHY6 69 aa13.8□□□□□ -0.2
TSPAN4-210ENST00000464987 PRM2P04554 102 aa13.8□□□□□ -0.2
TSPAN4-210ENST00000464987 CRYGDP07320 174 aa13.8□□□□□ -0.2
TSPAN4-210ENST00000464987 TP53TG1Q9Y2A0 90 aa13.8□□□□□ -0.2
TSPAN4-210ENST00000464987 DEFB131AP59861 70 aa13.79□□□□□ -0.2
TSPAN4-210ENST00000464987 LRRC75A-AS1Q8N1F1 130 aa13.79□□□□□ -0.2
TSPAN4-210ENST00000464987 Q8N2B8 174 aa13.79□□□□□ -0.2
TSPAN4-210ENST00000464987 GCN1Q92616 2671 aaKnown RBP13.79□□□□□ -0.2
TSPAN4-210ENST00000464987 HTN1P15515 57 aa13.79□□□□□ -0.2
TSPAN4-210ENST00000464987 ZNF56Q15929 161 aa13.79□□□□□ -0.2
TSPAN4-210ENST00000464987 KHDC1LQ5JSQ8 128 aa13.79□□□□□ -0.2
TSPAN4-210ENST00000464987 HIST2H2BCQ6DN03 193 aa13.79□□□□□ -0.2
TSPAN4-210ENST00000464987 NACAE9PAV3 2078 aa13.77□□□□□ -0.2
TSPAN4-210ENST00000464987 K7ERJ3 54 aa13.77□□□□□ -0.21
TSPAN4-210ENST00000464987 EMP1P54849 157 aa13.77□□□□□ -0.21
TSPAN4-210ENST00000464987 CYSLTR1Q9Y271 337 aa13.77□□□□□ -0.21
TSPAN4-210ENST00000464987 ZNF256Q9Y2P7 627 aaPredicted RBP13.77□□□□□ -0.21
TSPAN4-210ENST00000464987 HELZ2Q9BYK8 2649 aaKnown RBP13.77□□□□□ -0.21
TSPAN4-210ENST00000464987 CCDC168Q8NDH2 2452 aa13.77□□□□□ -0.21
TSPAN4-210ENST00000464987 TENM4Q6N022 2769 aa13.77□□□□□ -0.21
TSPAN4-210ENST00000464987 RBMY1BA6NDE4 496 aaKnown RBP13.76□□□□□ -0.21
TSPAN4-210ENST00000464987 RBMY1EA6NEQ0 496 aaKnown RBP13.76□□□□□ -0.21
TSPAN4-210ENST00000464987 LINC01619G3V211 115 aa13.76□□□□□ -0.21
TSPAN4-210ENST00000464987 M0QY20 66 aa13.76□□□□□ -0.21
TSPAN4-210ENST00000464987 RBMY1DP0C7P1 496 aaKnown RBP13.76□□□□□ -0.21
TSPAN4-210ENST00000464987 RPL32P62910 135 aaKnown RBP13.76□□□□□ -0.21
TSPAN4-210ENST00000464987 TMEM61Q8N0U2 210 aa13.76□□□□□ -0.21
TSPAN4-210ENST00000464987 WFDC11Q8NEX6 87 aa13.76□□□□□ -0.21
TSPAN4-210ENST00000464987 IGIPA6NJ69 53 aa13.76□□□□□ -0.21
TSPAN4-210ENST00000464987 VCYO14598 125 aa13.76□□□□□ -0.21
TSPAN4-210ENST00000464987 RIPPLY3P57055 190 aa13.76□□□□□ -0.21
TSPAN4-210ENST00000464987 ZNF876PQ49A33 203 aa13.76□□□□□ -0.21
TSPAN4-210ENST00000464987 DLX4Q92988 240 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms