RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 TIMM17BO60830 172 aa1.39□□□□□ -2.19
SMC4-203ENST00000462668 IGLV3-19P01714 112 aa1.39□□□□□ -2.19
SMC4-203ENST00000462668 HBDP02042 147 aa1.39□□□□□ -2.19
SMC4-203ENST00000462668 IGKV3-11P04433 115 aa1.39□□□□□ -2.19
SMC4-203ENST00000462668 IFNA4P05014 189 aa1.39□□□□□ -2.19
SMC4-203ENST00000462668 NCS1P62166 190 aa1.39□□□□□ -2.19
SMC4-203ENST00000462668 SELENOWP63302 87 aa1.39□□□□□ -2.19
SMC4-203ENST00000462668 LINC00470Q9BZP3 86 aa1.39□□□□□ -2.19
SMC4-203ENST00000462668 C5orf67F2Z3F1 127 aa1.39□□□□□ -2.19
SMC4-203ENST00000462668 TRGC1P0CF51 173 aa1.39□□□□□ -2.19
SMC4-203ENST00000462668 HLA-DRB4P13762 266 aa1.39□□□□□ -2.19
SMC4-203ENST00000462668 MYL5Q02045 173 aa1.39□□□□□ -2.19
SMC4-203ENST00000462668 EMX2Q04743 252 aa1.39□□□□□ -2.19
SMC4-203ENST00000462668 KHDC3LQ587J8 217 aa1.39□□□□□ -2.19
SMC4-203ENST00000462668 ANKRD11Q6UB99 2663 aaPredicted RBP1.39□□□□□ -2.19
SMC4-203ENST00000462668 LINC00311Q8N616 119 aa1.39□□□□□ -2.19
SMC4-203ENST00000462668 LCE3DQ9BYE3 92 aa1.39□□□□□ -2.19
SMC4-203ENST00000462668 CALML5Q9NZT1 146 aa1.39□□□□□ -2.19
SMC4-203ENST00000462668 HLA-DRB4X5D2U9 266 aa1.39□□□□□ -2.19
SMC4-203ENST00000462668 FAM208BQ5VWN6 2430 aa1.38□□□□□ -2.19
SMC4-203ENST00000462668 PLECQ15149 4684 aaKnown RBP1.38□□□□□ -2.19
SMC4-203ENST00000462668 TACC2O95359 2948 aa1.38□□□□□ -2.19
SMC4-203ENST00000462668 ITPR3Q14573 2671 aa1.38□□□□□ -2.19
SMC4-203ENST00000462668 CST8O60676 142 aa1.38□□□□□ -2.19
SMC4-203ENST00000462668 MT-ND4LP03901 98 aa1.38□□□□□ -2.19
SMC4-203ENST00000462668 GPX1P07203 203 aa1.38□□□□□ -2.19
SMC4-203ENST00000462668 COX4I1P13073 169 aa1.38□□□□□ -2.19
SMC4-203ENST00000462668 RRAS2P62070 204 aaPredicted RBP1.38□□□□□ -2.19
SMC4-203ENST00000462668 HES1Q14469 280 aa1.38□□□□□ -2.19
SMC4-203ENST00000462668 Q6ZRN7 208 aaPredicted RBP1.38□□□□□ -2.19
SMC4-203ENST00000462668 LINC00471Q8N535 108 aa1.38□□□□□ -2.19
SMC4-203ENST00000462668 ZCCHC13Q8WW36 166 aaKnown RBP1.38□□□□□ -2.19
SMC4-203ENST00000462668 DNAJC9Q8WXX5 260 aa1.38□□□□□ -2.19
SMC4-203ENST00000462668 DNAH11Q96DT5 4516 aa1.38□□□□□ -2.19
SMC4-203ENST00000462668 TRAV27A0A087WT01 109 aa1.38□□□□□ -2.19
SMC4-203ENST00000462668 C9orf170A2RU37 121 aa1.38□□□□□ -2.19
SMC4-203ENST00000462668 SAA1P0DJI8 122 aaPredicted RBP1.38□□□□□ -2.19
SMC4-203ENST00000462668 RPS25P62851 125 aaKnown RBP1.38□□□□□ -2.19
SMC4-203ENST00000462668 ZNF833PQ6ZTB9 187 aa1.38□□□□□ -2.19
SMC4-203ENST00000462668 MAGOHBQ96A72 148 aaKnown RBP1.38□□□□□ -2.19
SMC4-203ENST00000462668 METTL1Q9UBP6 276 aaKnown RBP1.38□□□□□ -2.19
SMC4-203ENST00000462668 GPR179Q6PRD1 2367 aa1.38□□□□□ -2.19
SMC4-203ENST00000462668 GVINP1Q7Z2Y8 2422 aa1.38□□□□□ -2.19
SMC4-203ENST00000462668 E7EQL1 145 aa1.38□□□□□ -2.19
SMC4-203ENST00000462668 TCRAP04437 139 aa1.38□□□□□ -2.19
SMC4-203ENST00000462668 RNASE3P12724 160 aaKnown RBP1.38□□□□□ -2.19
SMC4-203ENST00000462668 BTG2P78543 158 aa1.38□□□□□ -2.19
SMC4-203ENST00000462668 KLRD1Q13241 179 aa1.38□□□□□ -2.19
SMC4-203ENST00000462668 RPS19BP1Q86WX3 136 aaKnown RBP1.38□□□□□ -2.19
SMC4-203ENST00000462668 OR5D14Q8NGL3 314 aa1.38□□□□□ -2.19
SMC4-203ENST00000462668 LZICQ8WZA0 190 aa1.38□□□□□ -2.19
SMC4-203ENST00000462668 RER1O15258 196 aa1.37□□□□□ -2.19
SMC4-203ENST00000462668 IL9P15248 144 aa1.37□□□□□ -2.19
SMC4-203ENST00000462668 MRPS36P82909 103 aaKnown RBP1.37□□□□□ -2.19
SMC4-203ENST00000462668 DEFB113Q30KQ7 82 aa1.37□□□□□ -2.19
SMC4-203ENST00000462668 NIT2Q9NQR4 276 aa1.37□□□□□ -2.19
SMC4-203ENST00000462668 HMCN2Q8NDA2 5059 aa1.37□□□□□ -2.19
SMC4-203ENST00000462668 TANC2Q9HCD6 1990 aa1.37□□□□□ -2.19
SMC4-203ENST00000462668 CD14P08571 375 aa1.37□□□□□ -2.19
SMC4-203ENST00000462668 SSR2P43308 183 aa1.37□□□□□ -2.19
SMC4-203ENST00000462668 MAXP61244 160 aa1.37□□□□□ -2.19
SMC4-203ENST00000462668 NCKAP5O14513 1909 aa1.37□□□□□ -2.19
SMC4-203ENST00000462668 NDUFA6P56556 154 aa1.37□□□□□ -2.19
SMC4-203ENST00000462668 CCSMST1Q4G0I0 132 aa1.37□□□□□ -2.19
SMC4-203ENST00000462668 EIF5AL1Q6IS14 154 aaKnown RBP1.37□□□□□ -2.19
SMC4-203ENST00000462668 HMSDA8MTL9 139 aa1.36□□□□□ -2.19
SMC4-203ENST00000462668 CD3DP04234 171 aa1.36□□□□□ -2.19
SMC4-203ENST00000462668 CDK5R1Q15078 307 aa1.36□□□□□ -2.19
SMC4-203ENST00000462668 C1orf134Q5TEV5 83 aa1.36□□□□□ -2.19
SMC4-203ENST00000462668 POP5Q969H6 163 aaKnown RBP1.36□□□□□ -2.19
SMC4-203ENST00000462668 MXRA5Q9NR99 2828 aa1.36□□□□□ -2.19
SMC4-203ENST00000462668 KIAA1549Q9HCM3 1950 aa1.36□□□□□ -2.19
SMC4-203ENST00000462668 C10orf142B7Z368 130 aa1.36□□□□□ -2.19
SMC4-203ENST00000462668 IGF2P01344 180 aa1.36□□□□□ -2.19
SMC4-203ENST00000462668 PYDC2Q56P42 97 aa1.36□□□□□ -2.19
SMC4-203ENST00000462668 DPPA3Q6W0C5 159 aa1.36□□□□□ -2.19
SMC4-203ENST00000462668 PRELID3AQ96N28 172 aa1.36□□□□□ -2.19
SMC4-203ENST00000462668 GPR98Q8WXG9 6306 aa1.36□□□□□ -2.19
SMC4-203ENST00000462668 ABCA12Q86UK0 2595 aa1.36□□□□□ -2.19
SMC4-203ENST00000462668 CHD8Q9HCK8 2581 aa1.36□□□□□ -2.19
SMC4-203ENST00000462668 PAEPP09466 180 aa1.36□□□□□ -2.19
SMC4-203ENST00000462668 ZANQ9Y493 2812 aa1.36□□□□□ -2.19
SMC4-203ENST00000462668 NCOA6Q14686 2063 aaPredicted RBP1.36□□□□□ -2.19
SMC4-203ENST00000462668 hDV103S1A0JD37 113 aa1.35□□□□□ -2.19
SMC4-203ENST00000462668 ASAH2BP0C7U1 165 aa1.35□□□□□ -2.19
SMC4-203ENST00000462668 KRTAP5-1Q6L8H4 278 aa1.35□□□□□ -2.19
SMC4-203ENST00000462668 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.35□□□□□ -2.19
SMC4-203ENST00000462668 OR4B1Q8NGF8 309 aa1.35□□□□□ -2.19
SMC4-203ENST00000462668 RETNLBQ9BQ08 111 aa1.35□□□□□ -2.19
SMC4-203ENST00000462668 SLC35B3Q9H1N7 401 aa1.35□□□□□ -2.19
SMC4-203ENST00000462668 MPC1Q9Y5U8 109 aa1.35□□□□□ -2.19
SMC4-203ENST00000462668 ZNF670-ZNF695F2Z2N8 137 aa1.35□□□□□ -2.19
SMC4-203ENST00000462668 FABP2P12104 132 aa1.35□□□□□ -2.19
SMC4-203ENST00000462668 PLGLB1Q02325 96 aa1.35□□□□□ -2.19
SMC4-203ENST00000462668 KRTAP13-4Q3LI77 160 aa1.35□□□□□ -2.19
SMC4-203ENST00000462668 CACNA1BQ00975 2339 aa1.35□□□□□ -2.19
SMC4-203ENST00000462668 M0R2P5 195 aa1.35□□□□□ -2.19
SMC4-203ENST00000462668 PMP2P02689 132 aa1.35□□□□□ -2.19
SMC4-203ENST00000462668 FABP4P15090 132 aa1.35□□□□□ -2.19
SMC4-203ENST00000462668 FAM19A2Q8N3H0 131 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms