RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 PAX4O43316 350 aa8.23□□□□□ -1.09
CPNE1-221ENST00000462352 NUDT3O95989 172 aa8.23□□□□□ -1.09
CPNE1-221ENST00000462352 CRYGDP07320 174 aa8.23□□□□□ -1.09
CPNE1-221ENST00000462352 FOXA3P55318 350 aaPredicted RBP8.23□□□□□ -1.09
CPNE1-221ENST00000462352 FAM74A4Q5TZK3 123 aa8.23□□□□□ -1.09
CPNE1-221ENST00000462352 WDR73Q6P4I2 378 aa8.23□□□□□ -1.09
CPNE1-221ENST00000462352 PGLYRP4Q96LB8 373 aa8.23□□□□□ -1.09
CPNE1-221ENST00000462352 SEC11CQ9BY50 192 aa8.23□□□□□ -1.09
CPNE1-221ENST00000462352 CNFNQ9BYD5 112 aa8.23□□□□□ -1.09
CPNE1-221ENST00000462352 GFRA4Q9GZZ7 299 aa8.23□□□□□ -1.09
CPNE1-221ENST00000462352 MSRB1Q9NZV6 116 aa8.23□□□□□ -1.09
CPNE1-221ENST00000462352 HIGD1CA8MV81 97 aa8.22□□□□□ -1.09
CPNE1-221ENST00000462352 NTF3P20783 257 aa8.22□□□□□ -1.09
CPNE1-221ENST00000462352 SLC25A29Q8N8R3 303 aa8.22□□□□□ -1.09
CPNE1-221ENST00000462352 AP1S3Q96PC3 154 aa8.22□□□□□ -1.09
CPNE1-221ENST00000462352 LYSTQ99698 3801 aa8.22□□□□□ -1.09
CPNE1-221ENST00000462352 ALMS1Q8TCU4 4167 aa8.21□□□□□ -1.09
CPNE1-221ENST00000462352 TRBV6-4A0A1B0GX49 114 aa8.21□□□□□ -1.1
CPNE1-221ENST00000462352 TWIST1Q15672 202 aa8.21□□□□□ -1.1
CPNE1-221ENST00000462352 RNF212Q495C1 297 aa8.21□□□□□ -1.1
CPNE1-221ENST00000462352 Q6ZSN1 163 aa8.21□□□□□ -1.1
CPNE1-221ENST00000462352 C14orf178Q8N769 122 aaPredicted RBP8.21□□□□□ -1.1
CPNE1-221ENST00000462352 KMT2CQ8NEZ4 4911 aaKnown RBP8.2□□□□□ -1.1
CPNE1-221ENST00000462352 A0A096LPF7 62 aa8.2□□□□□ -1.1
CPNE1-221ENST00000462352 SMIM27A0A1W2PRY6 76 aa8.2□□□□□ -1.1
CPNE1-221ENST00000462352 PPP1R2P9O14990 202 aa8.2□□□□□ -1.1
CPNE1-221ENST00000462352 SMIM17P0DL12 118 aa8.2□□□□□ -1.1
CPNE1-221ENST00000462352 RHOHQ15669 191 aa8.2□□□□□ -1.1
CPNE1-221ENST00000462352 C10orf91Q5T1B1 145 aa8.2□□□□□ -1.1
CPNE1-221ENST00000462352 NUP35Q8NFH5 326 aa8.2□□□□□ -1.1
CPNE1-221ENST00000462352 LINC00476Q8WZB0 136 aa8.2□□□□□ -1.1
CPNE1-221ENST00000462352 BORCS7Q96B45 105 aa8.2□□□□□ -1.1
CPNE1-221ENST00000462352 NAT8BQ9UHF3 227 aa8.2□□□□□ -1.1
CPNE1-221ENST00000462352 ICOSQ9Y6W8 199 aa8.2□□□□□ -1.1
CPNE1-221ENST00000462352 KIF25-AS1Q9Y6Z4 181 aa8.2□□□□□ -1.1
CPNE1-221ENST00000462352 LOC100131303A0A0U1RQF7 123 aa8.19□□□□□ -1.1
CPNE1-221ENST00000462352 A0A1B0GUT8 65 aa8.19□□□□□ -1.1
CPNE1-221ENST00000462352 K7EQD1 137 aa8.19□□□□□ -1.1
CPNE1-221ENST00000462352 MT-ND4LP03901 98 aa8.19□□□□□ -1.1
CPNE1-221ENST00000462352 TRGC1P0CF51 173 aa8.19□□□□□ -1.1
CPNE1-221ENST00000462352 GYPEP15421 78 aa8.19□□□□□ -1.1
CPNE1-221ENST00000462352 EVI2AP22794 236 aa8.19□□□□□ -1.1
CPNE1-221ENST00000462352 LINC00315P59091 139 aa8.19□□□□□ -1.1
CPNE1-221ENST00000462352 ZNF56Q15929 161 aa8.19□□□□□ -1.1
CPNE1-221ENST00000462352 MRPL23Q16540 153 aaKnown RBP8.19□□□□□ -1.1
CPNE1-221ENST00000462352 LGALS9CQ6DKI2 356 aa8.19□□□□□ -1.1
CPNE1-221ENST00000462352 ANAPC16Q96DE5 110 aa8.19□□□□□ -1.1
CPNE1-221ENST00000462352 PRADC1Q9BSG0 188 aa8.19□□□□□ -1.1
CPNE1-221ENST00000462352 CARHSP1Q9Y2V2 147 aaKnown RBP8.19□□□□□ -1.1
CPNE1-221ENST00000462352 DNAH1Q9P2D7 4330 aa8.18□□□□□ -1.1
CPNE1-221ENST00000462352 LCE6AA0A183 80 aa8.18□□□□□ -1.1
CPNE1-221ENST00000462352 LY6G6CO95867 125 aa8.18□□□□□ -1.1
CPNE1-221ENST00000462352 P0DMU3 169 aa8.18□□□□□ -1.1
CPNE1-221ENST00000462352 FAM231AP0DMU4 169 aa8.18□□□□□ -1.1
CPNE1-221ENST00000462352 FAM231CP0DMU5 169 aa8.18□□□□□ -1.1
CPNE1-221ENST00000462352 SRIP30626 198 aa8.18□□□□□ -1.1
CPNE1-221ENST00000462352 RAB4BP61018 213 aa8.18□□□□□ -1.1
CPNE1-221ENST00000462352 SLC7A5P1Q8MH63 180 aa8.18□□□□□ -1.1
CPNE1-221ENST00000462352 DPH3P1Q9H4G8 78 aa8.18□□□□□ -1.1
CPNE1-221ENST00000462352 SACSQ9NZJ4 4579 aa8.17□□□□□ -1.1
CPNE1-221ENST00000462352 VPS13DQ5THJ4 4388 aa8.17□□□□□ -1.1
CPNE1-221ENST00000462352 F5H697 171 aa8.17□□□□□ -1.1
CPNE1-221ENST00000462352 MGPP08493 103 aa8.17□□□□□ -1.1
CPNE1-221ENST00000462352 NDUFA5Q16718 116 aa8.17□□□□□ -1.1
CPNE1-221ENST00000462352 Q9UF83 564 aa8.17□□□□□ -1.1
CPNE1-221ENST00000462352 RIGQ13278 110 aa8.16□□□□□ -1.1
CPNE1-221ENST00000462352 SMIM15Q7Z3B0 74 aa8.16□□□□□ -1.1
CPNE1-221ENST00000462352 NEGR1Q7Z3B1 354 aa8.16□□□□□ -1.1
CPNE1-221ENST00000462352 UBE2DNLQ8IWF7 75 aa8.16□□□□□ -1.1
CPNE1-221ENST00000462352 TRBV10-1A0A0K0K1A3 114 aa8.15□□□□□ -1.1
CPNE1-221ENST00000462352 GAGE12JA6NER3 117 aa8.15□□□□□ -1.1
CPNE1-221ENST00000462352 APOC3P02656 99 aa8.15□□□□□ -1.1
CPNE1-221ENST00000462352 CCL18P55774 89 aa8.15□□□□□ -1.1
CPNE1-221ENST00000462352 FAM3BP58499 235 aaPredicted RBP8.15□□□□□ -1.1
CPNE1-221ENST00000462352 GAGE1Q13065 139 aa8.15□□□□□ -1.1
CPNE1-221ENST00000462352 GAGE4Q13068 117 aa8.15□□□□□ -1.1
CPNE1-221ENST00000462352 GAGE5Q13069 117 aa8.15□□□□□ -1.1
CPNE1-221ENST00000462352 ESRGQ1W209 222 aa8.15□□□□□ -1.1
CPNE1-221ENST00000462352 GAGE13Q4V321 117 aa8.15□□□□□ -1.1
CPNE1-221ENST00000462352 SUMO4Q6EEV6 95 aa8.15□□□□□ -1.1
CPNE1-221ENST00000462352 CLRN3Q8NCR9 226 aa8.15□□□□□ -1.1
CPNE1-221ENST00000462352 CTDSP1Q9GZU7 261 aa8.15□□□□□ -1.1
CPNE1-221ENST00000462352 LINC00588Q9Y4M8 146 aa8.15□□□□□ -1.1
CPNE1-221ENST00000462352 LINC00694P0DN24 101 aa8.14□□□□□ -1.11
CPNE1-221ENST00000462352 MRPL54Q6P161 138 aaKnown RBP8.14□□□□□ -1.11
CPNE1-221ENST00000462352 LYPD5Q6UWN5 251 aa8.14□□□□□ -1.11
CPNE1-221ENST00000462352 SH2D6Q7Z4S9 175 aa8.14□□□□□ -1.11
CPNE1-221ENST00000462352 ZNRF2Q8NHG8 242 aa8.14□□□□□ -1.11
CPNE1-221ENST00000462352 TMEM191AQ9H0A3 160 aa8.14□□□□□ -1.11
CPNE1-221ENST00000462352 A0A1B0GW15 77 aa8.13□□□□□ -1.11
CPNE1-221ENST00000462352 C7orf77A4D0Y5 90 aa8.13□□□□□ -1.11
CPNE1-221ENST00000462352 M0QY20 66 aa8.13□□□□□ -1.11
CPNE1-221ENST00000462352 CAMPP49913 170 aa8.13□□□□□ -1.11
CPNE1-221ENST00000462352 RPL36AP83881 106 aaKnown RBP8.13□□□□□ -1.11
CPNE1-221ENST00000462352 RHEBQ15382 184 aa8.13□□□□□ -1.11
CPNE1-221ENST00000462352 NEXN-AS1Q8NBZ9 246 aa8.13□□□□□ -1.11
CPNE1-221ENST00000462352 ATP6V0E2Q8NHE4 81 aa8.13□□□□□ -1.11
CPNE1-221ENST00000462352 RPL36ALQ969Q0 106 aaKnown RBP8.13□□□□□ -1.11
CPNE1-221ENST00000462352 HYDINQ4G0P3 5121 aa8.13□□□□□ -1.11
CPNE1-221ENST00000462352 RYR2Q92736 4967 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms