RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 Q6ZSN1 163 aa6.87□□□□□ -1.31
SF3A3-204ENST00000462258 ZFP82Q8N141 532 aa6.87□□□□□ -1.31
SF3A3-204ENST00000462258 C14orf178Q8N769 122 aaPredicted RBP6.87□□□□□ -1.31
SF3A3-204ENST00000462258 ATP6V0E2Q8NHE4 81 aa6.87□□□□□ -1.31
SF3A3-204ENST00000462258 GTSF1LQ9H1H1 148 aa6.87□□□□□ -1.31
SF3A3-204ENST00000462258 GNG13Q9P2W3 67 aa6.87□□□□□ -1.31
SF3A3-204ENST00000462258 A0A087WTM6 91 aa6.86□□□□□ -1.31
SF3A3-204ENST00000462258 A0A087WWL8 130 aa6.86□□□□□ -1.31
SF3A3-204ENST00000462258 CXCL1P09341 107 aa6.86□□□□□ -1.31
SF3A3-204ENST00000462258 RAB5CP51148 216 aa6.86□□□□□ -1.31
SF3A3-204ENST00000462258 RPL19P84098 196 aaKnown RBP6.86□□□□□ -1.31
SF3A3-204ENST00000462258 PRR27Q6MZM9 219 aa6.86□□□□□ -1.31
SF3A3-204ENST00000462258 BAGE2Q86Y30 109 aa6.86□□□□□ -1.31
SF3A3-204ENST00000462258 C11orf52Q96A22 123 aa6.86□□□□□ -1.31
SF3A3-204ENST00000462258 SFRP2Q96HF1 295 aa6.86□□□□□ -1.31
SF3A3-204ENST00000462258 MLST8Q9BVC4 326 aa6.86□□□□□ -1.31
SF3A3-204ENST00000462258 TEX46H3BTG2 121 aa6.85□□□□□ -1.31
SF3A3-204ENST00000462258 IGHV3-30P01768 117 aa6.85□□□□□ -1.31
SF3A3-204ENST00000462258 IGHV3-33P01772 117 aa6.85□□□□□ -1.31
SF3A3-204ENST00000462258 C1QBP02746 253 aa6.85□□□□□ -1.31
SF3A3-204ENST00000462258 IGHV3-30-3P0DP02 117 aa6.85□□□□□ -1.31
SF3A3-204ENST00000462258 IGHV3-30-5P0DP03 117 aa6.85□□□□□ -1.31
SF3A3-204ENST00000462258 RPL35P42766 123 aaKnown RBP6.85□□□□□ -1.31
SF3A3-204ENST00000462258 CCL20P78556 96 aa6.85□□□□□ -1.31
SF3A3-204ENST00000462258 CDPF1Q6NVV7 123 aa6.85□□□□□ -1.31
SF3A3-204ENST00000462258 DERL1Q9BUN8 251 aa6.85□□□□□ -1.31
SF3A3-204ENST00000462258 TRAV1-1A0A0B4J248 108 aa6.84□□□□□ -1.31
SF3A3-204ENST00000462258 IBA57-AS1B1ANH7 110 aa6.84□□□□□ -1.31
SF3A3-204ENST00000462258 PSCAO43653 123 aa6.84□□□□□ -1.31
SF3A3-204ENST00000462258 FUSP35637 526 aaKnown RBP eCLIP6.84□□□□□ -1.31
SF3A3-204ENST00000462258 SULT1A2P50226 295 aa6.84□□□□□ -1.31
SF3A3-204ENST00000462258 CENPWQ5EE01 88 aa6.84□□□□□ -1.31
SF3A3-204ENST00000462258 SLC51BQ86UW2 128 aa6.84□□□□□ -1.31
SF3A3-204ENST00000462258 MAPKAPK5-AS1Q8N8E1 139 aa6.84□□□□□ -1.31
SF3A3-204ENST00000462258 OR10AG1Q8NH19 301 aa6.84□□□□□ -1.31
SF3A3-204ENST00000462258 Q9HAA7 133 aa6.84□□□□□ -1.31
SF3A3-204ENST00000462258 Q9UF83 564 aa6.84□□□□□ -1.31
SF3A3-204ENST00000462258 SNAI2O43623 268 aa6.83□□□□□ -1.32
SF3A3-204ENST00000462258 IFNA1P01562 189 aa6.83□□□□□ -1.32
SF3A3-204ENST00000462258 MEF2BQ02080 365 aaPredicted RBP6.83□□□□□ -1.32
SF3A3-204ENST00000462258 LAGE3Q14657 143 aa6.83□□□□□ -1.32
SF3A3-204ENST00000462258 ZNF56Q15929 161 aa6.83□□□□□ -1.32
SF3A3-204ENST00000462258 Q6ZNX1 250 aa6.83□□□□□ -1.32
SF3A3-204ENST00000462258 Q8N3U1 123 aa6.83□□□□□ -1.32
SF3A3-204ENST00000462258 A0A087WWC5 75 aa6.82□□□□□ -1.32
SF3A3-204ENST00000462258 TRBV10-1A0A0K0K1A3 114 aa6.82□□□□□ -1.32
SF3A3-204ENST00000462258 OR5AL1P0C617 328 aa6.82□□□□□ -1.32
SF3A3-204ENST00000462258 BCL2P10415 239 aa6.82□□□□□ -1.32
SF3A3-204ENST00000462258 SPANXN1Q5VSR9 72 aa6.82□□□□□ -1.32
SF3A3-204ENST00000462258 AKAP14Q86UN6 197 aa6.82□□□□□ -1.32
SF3A3-204ENST00000462258 PGPEP1Q9NXJ5 209 aa6.82□□□□□ -1.32
SF3A3-204ENST00000462258 DNAH8Q96JB1 4490 aa6.82□□□□□ -1.32
SF3A3-204ENST00000462258 FAT1Q14517 4588 aa6.82□□□□□ -1.32
SF3A3-204ENST00000462258 hCG_2014768A0A024R1R8 64 aa6.81□□□□□ -1.32
SF3A3-204ENST00000462258 PDE6DO43924 150 aa6.81□□□□□ -1.32
SF3A3-204ENST00000462258 GNG4P50150 75 aa6.81□□□□□ -1.32
SF3A3-204ENST00000462258 RPL36AP83881 106 aaKnown RBP6.81□□□□□ -1.32
SF3A3-204ENST00000462258 RPL36ALQ969Q0 106 aaKnown RBP6.81□□□□□ -1.32
SF3A3-204ENST00000462258 AP1S3Q96PC3 154 aa6.81□□□□□ -1.32
SF3A3-204ENST00000462258 SSBP4Q9BWG4 385 aaPredicted RBP6.81□□□□□ -1.32
SF3A3-204ENST00000462258 KRTAP4-5Q9BYR2 181 aa6.81□□□□□ -1.32
SF3A3-204ENST00000462258 TRBV7-3A0A075B6L6 115 aa6.8□□□□□ -1.32
SF3A3-204ENST00000462258 MUC21A0A0G2JKD1 596 aa6.8□□□□□ -1.32
SF3A3-204ENST00000462258 MUC21A0A140T8X8 626 aa6.8□□□□□ -1.32
SF3A3-204ENST00000462258 LRCOL1A6NCL2 159 aa6.8□□□□□ -1.32
SF3A3-204ENST00000462258 IGLV2-8P01709 118 aa6.8□□□□□ -1.32
SF3A3-204ENST00000462258 RAB4BP61018 213 aa6.8□□□□□ -1.32
SF3A3-204ENST00000462258 UBE2D3P61077 147 aa6.8□□□□□ -1.32
SF3A3-204ENST00000462258 UBE2D2P62837 147 aa6.8□□□□□ -1.32
SF3A3-204ENST00000462258 C9orf62Q8N4C0 152 aa6.8□□□□□ -1.32
SF3A3-204ENST00000462258 OR10G8Q8NGN5 311 aa6.8□□□□□ -1.32
SF3A3-204ENST00000462258 SMIM12Q96EX1 92 aa6.8□□□□□ -1.32
SF3A3-204ENST00000462258 TPPP3Q9BW30 176 aa6.8□□□□□ -1.32
SF3A3-204ENST00000462258 URGCP-MRPS24S4R325 110 aa6.8□□□□□ -1.32
SF3A3-204ENST00000462258 TRBV20OR9-2A0A075B6H5 130 aa6.79□□□□□ -1.32
SF3A3-204ENST00000462258 RAB19A4D1S5 217 aa6.79□□□□□ -1.32
SF3A3-204ENST00000462258 C19orf71A6NCJ1 209 aa6.79□□□□□ -1.32
SF3A3-204ENST00000462258 GZMBP10144 247 aa6.79□□□□□ -1.32
SF3A3-204ENST00000462258 SSTP61278 116 aa6.79□□□□□ -1.32
SF3A3-204ENST00000462258 TOR2AQ5JU69 321 aa6.79□□□□□ -1.32
SF3A3-204ENST00000462258 DAZ4Q86SG3 579 aaKnown RBP6.79□□□□□ -1.32
SF3A3-204ENST00000462258 NIT1Q86X76 327 aa6.79□□□□□ -1.32
SF3A3-204ENST00000462258 Q8N1X5 172 aa6.79□□□□□ -1.32
SF3A3-204ENST00000462258 OR2D3Q8NGH3 330 aa6.79□□□□□ -1.32
SF3A3-204ENST00000462258 NTN5Q8WTR8 489 aaPredicted RBP6.79□□□□□ -1.32
SF3A3-204ENST00000462258 DAZAP1Q96EP5 407 aaKnown RBP6.79□□□□□ -1.32
SF3A3-204ENST00000462258 TM2D2Q9BX73 214 aa6.79□□□□□ -1.32
SF3A3-204ENST00000462258 DAZ3Q9NR90 486 aaKnown RBP6.79□□□□□ -1.32
SF3A3-204ENST00000462258 MED9Q9NWA0 146 aa6.79□□□□□ -1.32
SF3A3-204ENST00000462258 VAX2Q9UIW0 290 aa6.79□□□□□ -1.32
SF3A3-204ENST00000462258 IGLV5-52A0A0A0MRZ9 124 aa6.78□□□□□ -1.32
SF3A3-204ENST00000462258 TRAV8-3A0A0A6YYJ7 113 aa6.78□□□□□ -1.32
SF3A3-204ENST00000462258 LCE2BO14633 110 aa6.78□□□□□ -1.32
SF3A3-204ENST00000462258 P01737 135 aa6.78□□□□□ -1.32
SF3A3-204ENST00000462258 IGLC6P0CF74 106 aa6.78□□□□□ -1.32
SF3A3-204ENST00000462258 SMIM17P0DL12 118 aa6.78□□□□□ -1.32
SF3A3-204ENST00000462258 TAGLN2P37802 199 aaKnown RBP6.78□□□□□ -1.32
SF3A3-204ENST00000462258 KRTAP10-1P60331 282 aa6.78□□□□□ -1.32
SF3A3-204ENST00000462258 RPS20P60866 119 aaKnown RBP6.78□□□□□ -1.32
SF3A3-204ENST00000462258 Q8N814 137 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms