RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 TRGV1A0A0A0MS02 117 aa10.91□□□□□ -0.66
TMEM39A-203ENST00000461654 MIFP14174 115 aa10.91□□□□□ -0.66
TMEM39A-203ENST00000461654 LGALS9BQ3B8N2 356 aa10.91□□□□□ -0.66
TMEM39A-203ENST00000461654 KIAA1644Q3SXP7 199 aa10.91□□□□□ -0.66
TMEM39A-203ENST00000461654 NOP10Q9NPE3 64 aaKnown RBP10.91□□□□□ -0.66
TMEM39A-203ENST00000461654 MRPL16Q9NX20 251 aaKnown RBP10.91□□□□□ -0.66
TMEM39A-203ENST00000461654 PPBPP02775 128 aa10.9□□□□□ -0.66
TMEM39A-203ENST00000461654 MGPP08493 103 aa10.9□□□□□ -0.66
TMEM39A-203ENST00000461654 RAB4AP20338 218 aa10.9□□□□□ -0.66
TMEM39A-203ENST00000461654 CKS2P33552 79 aa10.9□□□□□ -0.66
TMEM39A-203ENST00000461654 EMP1P54849 157 aa10.9□□□□□ -0.66
TMEM39A-203ENST00000461654 IL17DQ8TAD2 202 aa10.9□□□□□ -0.66
TMEM39A-203ENST00000461654 RASL10AQ92737 203 aa10.9□□□□□ -0.66
TMEM39A-203ENST00000461654 F5H697 171 aa10.89□□□□□ -0.67
TMEM39A-203ENST00000461654 S100A6P06703 90 aa10.89□□□□□ -0.67
TMEM39A-203ENST00000461654 MRPL51Q4U2R6 128 aaKnown RBP10.89□□□□□ -0.67
TMEM39A-203ENST00000461654 FAM74A4Q5TZK3 123 aa10.89□□□□□ -0.67
TMEM39A-203ENST00000461654 ORMDL3Q8N138 153 aa10.89□□□□□ -0.67
TMEM39A-203ENST00000461654 OVOL2Q9BRP0 275 aa10.89□□□□□ -0.67
TMEM39A-203ENST00000461654 A0A087WWL8 130 aa10.88□□□□□ -0.67
TMEM39A-203ENST00000461654 RHODO00212 210 aa10.88□□□□□ -0.67
TMEM39A-203ENST00000461654 PHOX2AO14813 284 aa10.88□□□□□ -0.67
TMEM39A-203ENST00000461654 HIST1H2BKO60814 126 aa10.88□□□□□ -0.67
TMEM39A-203ENST00000461654 HIST1H2BJP06899 126 aa10.88□□□□□ -0.67
TMEM39A-203ENST00000461654 HIST1H2BOP23527 126 aa10.88□□□□□ -0.67
TMEM39A-203ENST00000461654 SRIP30626 198 aa10.88□□□□□ -0.67
TMEM39A-203ENST00000461654 HIST1H2BBP33778 126 aa10.88□□□□□ -0.67
TMEM39A-203ENST00000461654 HIST1H2BDP58876 126 aa10.88□□□□□ -0.67
TMEM39A-203ENST00000461654 HIST1H2BCP62807 126 aa10.88□□□□□ -0.67
TMEM39A-203ENST00000461654 HIST2H2BEQ16778 126 aa10.88□□□□□ -0.67
TMEM39A-203ENST00000461654 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.88□□□□□ -0.67
TMEM39A-203ENST00000461654 HIST1H2BHQ93079 126 aa10.88□□□□□ -0.67
TMEM39A-203ENST00000461654 MRAP2Q96G30 205 aa10.88□□□□□ -0.67
TMEM39A-203ENST00000461654 HIST1H2BNQ99877 126 aa10.88□□□□□ -0.67
TMEM39A-203ENST00000461654 HIST1H2BMQ99879 126 aa10.88□□□□□ -0.67
TMEM39A-203ENST00000461654 IGHV4-28A0A0C4DH34 117 aa10.87□□□□□ -0.67
TMEM39A-203ENST00000461654 PLAC8L1A1L4L8 177 aa10.87□□□□□ -0.67
TMEM39A-203ENST00000461654 D6R8Y8 96 aa10.87□□□□□ -0.67
TMEM39A-203ENST00000461654 ZNF56Q15929 161 aa10.87□□□□□ -0.67
TMEM39A-203ENST00000461654 OR4C5Q8NGB2 326 aa10.87□□□□□ -0.67
TMEM39A-203ENST00000461654 RNF185Q96GF1 192 aa10.87□□□□□ -0.67
TMEM39A-203ENST00000461654 ALKBH7Q9BT30 221 aaPredicted RBP10.87□□□□□ -0.67
TMEM39A-203ENST00000461654 JPT2Q9H910 190 aa10.87□□□□□ -0.67
TMEM39A-203ENST00000461654 NBEAL2Q6ZNJ1 2754 aa10.87□□□□□ -0.67
TMEM39A-203ENST00000461654 TRGV2A0A075B6R0 118 aa10.86□□□□□ -0.67
TMEM39A-203ENST00000461654 GAGE12BA1L429 117 aa10.86□□□□□ -0.67
TMEM39A-203ENST00000461654 RS1O15537 224 aa10.86□□□□□ -0.67
TMEM39A-203ENST00000461654 GAGE7O76087 117 aa10.86□□□□□ -0.67
TMEM39A-203ENST00000461654 PPP1R17O96001 155 aa10.86□□□□□ -0.67
TMEM39A-203ENST00000461654 GAGE12FP0CL80 117 aa10.86□□□□□ -0.67
TMEM39A-203ENST00000461654 GAGE12GP0CL81 117 aa10.86□□□□□ -0.67
TMEM39A-203ENST00000461654 GAGE12IP0CL82 117 aa10.86□□□□□ -0.67
TMEM39A-203ENST00000461654 Q6ZTI0 123 aa10.86□□□□□ -0.67
TMEM39A-203ENST00000461654 PRELID3AQ96N28 172 aa10.86□□□□□ -0.67
TMEM39A-203ENST00000461654 LAMTOR2Q9Y2Q5 125 aa10.86□□□□□ -0.67
TMEM39A-203ENST00000461654 KIF25-AS1Q9Y6Z4 181 aa10.86□□□□□ -0.67
TMEM39A-203ENST00000461654 RYR3Q15413 4870 aa10.85□□□□□ -0.67
TMEM39A-203ENST00000461654 LYRM9A8MSI8 78 aa10.85□□□□□ -0.67
TMEM39A-203ENST00000461654 CIDEAO60543 219 aa10.85□□□□□ -0.67
TMEM39A-203ENST00000461654 CRYGDP07320 174 aa10.85□□□□□ -0.67
TMEM39A-203ENST00000461654 NDUFA6P56556 154 aa10.85□□□□□ -0.67
TMEM39A-203ENST00000461654 OR10J3Q5JRS4 329 aa10.85□□□□□ -0.67
TMEM39A-203ENST00000461654 CFAP126Q5VTH2 177 aa10.85□□□□□ -0.67
TMEM39A-203ENST00000461654 RETNQ9HD89 108 aa10.85□□□□□ -0.67
TMEM39A-203ENST00000461654 TRAV4A0A0B4J268 109 aa10.84□□□□□ -0.67
TMEM39A-203ENST00000461654 TEX48A0A1B0GUV7 120 aa10.84□□□□□ -0.67
TMEM39A-203ENST00000461654 H7C1H1 209 aa10.84□□□□□ -0.67
TMEM39A-203ENST00000461654 ZFP2Q6ZN57 461 aa10.84□□□□□ -0.67
TMEM39A-203ENST00000461654 BAGE3Q86Y29 109 aa10.84□□□□□ -0.67
TMEM39A-203ENST00000461654 POM121L12Q8N7R1 296 aa10.84□□□□□ -0.67
TMEM39A-203ENST00000461654 Q8NAQ8 132 aa10.84□□□□□ -0.67
TMEM39A-203ENST00000461654 SAMD10Q9BYL1 202 aa10.84□□□□□ -0.67
TMEM39A-203ENST00000461654 SMKR1H3BMG3 65 aa10.83□□□□□ -0.68
TMEM39A-203ENST00000461654 NCR2O95944 276 aa10.83□□□□□ -0.68
TMEM39A-203ENST00000461654 SPART-AS1P0CW21 52 aa10.83□□□□□ -0.68
TMEM39A-203ENST00000461654 DEFB130BP0DP73 79 aa10.83□□□□□ -0.68
TMEM39A-203ENST00000461654 DEFB130AP0DP74 79 aa10.83□□□□□ -0.68
TMEM39A-203ENST00000461654 Q0VG73 95 aa10.83□□□□□ -0.68
TMEM39A-203ENST00000461654 IGHV3-73A0A0B4J1V6 119 aa10.82□□□□□ -0.68
TMEM39A-203ENST00000461654 TRAV26-2A0A0B4J265 109 aa10.82□□□□□ -0.68
TMEM39A-203ENST00000461654 DEFB4AO15263 64 aa10.82□□□□□ -0.68
TMEM39A-203ENST00000461654 LINC00315P59091 139 aa10.82□□□□□ -0.68
TMEM39A-203ENST00000461654 FAM222AQ5U5X8 452 aa10.82□□□□□ -0.68
TMEM39A-203ENST00000461654 SUMO4Q6EEV6 95 aa10.82□□□□□ -0.68
TMEM39A-203ENST00000461654 C18orf32Q8TCD1 76 aa10.82□□□□□ -0.68
TMEM39A-203ENST00000461654 MAP1LC3AQ9H492 121 aa10.82□□□□□ -0.68
TMEM39A-203ENST00000461654 TNFRSF6BO95407 300 aa10.81□□□□□ -0.68
TMEM39A-203ENST00000461654 ZFAND6Q6FIF0 208 aa10.81□□□□□ -0.68
TMEM39A-203ENST00000461654 DKK2Q9UBU2 259 aa10.81□□□□□ -0.68
TMEM39A-203ENST00000461654 MUC4Q99102 2169 aa10.81□□□□□ -0.68
TMEM39A-203ENST00000461654 LCE6AA0A183 80 aa10.8□□□□□ -0.68
TMEM39A-203ENST00000461654 NPYP01303 97 aa10.8□□□□□ -0.68
TMEM39A-203ENST00000461654 IGHV3-53P01767 116 aa10.8□□□□□ -0.68
TMEM39A-203ENST00000461654 DAD1P61803 113 aa10.8□□□□□ -0.68
TMEM39A-203ENST00000461654 LINC00612Q8N6U2 182 aa10.8□□□□□ -0.68
TMEM39A-203ENST00000461654 PRSS3P2Q8NHM4 247 aa10.8□□□□□ -0.68
TMEM39A-203ENST00000461654 C18orf15Q96N68 181 aa10.8□□□□□ -0.68
TMEM39A-203ENST00000461654 TRGV4A0A0C4DH28 118 aa10.79□□□□□ -0.68
TMEM39A-203ENST00000461654 IQCJQ1A5X6 159 aa10.79□□□□□ -0.68
TMEM39A-203ENST00000461654 UFSP1Q6NVU6 142 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms