RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 CDPF1Q6NVV7 123 aa12.72□□□□□ -0.37
COL5A1-203ENST00000460264 ZFP82Q8N141 532 aa12.72□□□□□ -0.37
COL5A1-203ENST00000460264 SFRP2Q96HF1 295 aa12.72□□□□□ -0.37
COL5A1-203ENST00000460264 DNAH5Q8TE73 4624 aa12.71□□□□□ -0.37
COL5A1-203ENST00000460264 IBA57-AS1B1ANH7 110 aa12.71□□□□□ -0.37
COL5A1-203ENST00000460264 IGHV3-30P01768 117 aa12.71□□□□□ -0.37
COL5A1-203ENST00000460264 IGHV3-33P01772 117 aa12.71□□□□□ -0.37
COL5A1-203ENST00000460264 IGHV3-30-3P0DP02 117 aa12.71□□□□□ -0.37
COL5A1-203ENST00000460264 IGHV3-30-5P0DP03 117 aa12.71□□□□□ -0.37
COL5A1-203ENST00000460264 BAGE2Q86Y30 109 aa12.71□□□□□ -0.37
COL5A1-203ENST00000460264 MAPKAPK5-AS1Q8N8E1 139 aa12.71□□□□□ -0.37
COL5A1-203ENST00000460264 MANBALQ9NQG1 85 aa12.71□□□□□ -0.37
COL5A1-203ENST00000460264 APOBP04114 4563 aaKnown RBP12.71□□□□□ -0.38
COL5A1-203ENST00000460264 ABCA13Q86UQ4 5058 aa12.71□□□□□ -0.38
COL5A1-203ENST00000460264 TRAV1-1A0A0B4J248 108 aa12.7□□□□□ -0.38
COL5A1-203ENST00000460264 RAB5CP51148 216 aa12.7□□□□□ -0.38
COL5A1-203ENST00000460264 CCL20P78556 96 aa12.7□□□□□ -0.38
COL5A1-203ENST00000460264 RPL19P84098 196 aaKnown RBP12.7□□□□□ -0.38
COL5A1-203ENST00000460264 TCTE3Q8IZS6 198 aa12.7□□□□□ -0.38
COL5A1-203ENST00000460264 GNG13Q9P2W3 67 aa12.7□□□□□ -0.38
COL5A1-203ENST00000460264 CXCL1P09341 107 aa12.69□□□□□ -0.38
COL5A1-203ENST00000460264 EIF5AL1Q6IS14 154 aaKnown RBP12.69□□□□□ -0.38
COL5A1-203ENST00000460264 Q8N3U1 123 aa12.69□□□□□ -0.38
COL5A1-203ENST00000460264 C11orf52Q96A22 123 aa12.69□□□□□ -0.38
COL5A1-203ENST00000460264 Q9HAA7 133 aa12.69□□□□□ -0.38
COL5A1-203ENST00000460264 RPL35P42766 123 aaKnown RBP12.68□□□□□ -0.38
COL5A1-203ENST00000460264 DERL1Q9BUN8 251 aa12.68□□□□□ -0.38
COL5A1-203ENST00000460264 A0A087WWC5 75 aa12.67□□□□□ -0.38
COL5A1-203ENST00000460264 PSCAO43653 123 aa12.67□□□□□ -0.38
COL5A1-203ENST00000460264 LAGE3Q14657 143 aa12.67□□□□□ -0.38
COL5A1-203ENST00000460264 PRR27Q6MZM9 219 aa12.67□□□□□ -0.38
COL5A1-203ENST00000460264 OR10AG1Q8NH19 301 aa12.67□□□□□ -0.38
COL5A1-203ENST00000460264 LRCOL1A6NCL2 159 aa12.66□□□□□ -0.38
COL5A1-203ENST00000460264 SULT1A2P50226 295 aa12.66□□□□□ -0.38
COL5A1-203ENST00000460264 Q8N1X5 172 aa12.66□□□□□ -0.38
COL5A1-203ENST00000460264 TRBV10-1A0A0K0K1A3 114 aa12.65□□□□□ -0.38
COL5A1-203ENST00000460264 SNAI2O43623 268 aa12.65□□□□□ -0.38
COL5A1-203ENST00000460264 TEX46H3BTG2 121 aa12.64□□□□□ -0.39
COL5A1-203ENST00000460264 C1QBP02746 253 aa12.64□□□□□ -0.39
COL5A1-203ENST00000460264 OR5AL1P0C617 328 aa12.64□□□□□ -0.39
COL5A1-203ENST00000460264 CENPWQ5EE01 88 aa12.64□□□□□ -0.39
COL5A1-203ENST00000460264 SSBP4Q9BWG4 385 aaPredicted RBP12.64□□□□□ -0.39
COL5A1-203ENST00000460264 KRTAP10-1P60331 282 aa12.63□□□□□ -0.39
COL5A1-203ENST00000460264 Q6ZNX1 250 aa12.63□□□□□ -0.39
COL5A1-203ENST00000460264 SLC51BQ86UW2 128 aa12.63□□□□□ -0.39
COL5A1-203ENST00000460264 MUC21A0A0G2JKD1 596 aa12.62□□□□□ -0.39
COL5A1-203ENST00000460264 MUC21A0A140T8X8 626 aa12.62□□□□□ -0.39
COL5A1-203ENST00000460264 IGLV2-8P01709 118 aa12.62□□□□□ -0.39
COL5A1-203ENST00000460264 RAB4BP61018 213 aa12.62□□□□□ -0.39
COL5A1-203ENST00000460264 MEF2BQ02080 365 aaPredicted RBP12.62□□□□□ -0.39
COL5A1-203ENST00000460264 DAZ4Q86SG3 579 aaKnown RBP12.62□□□□□ -0.39
COL5A1-203ENST00000460264 DAZ3Q9NR90 486 aaKnown RBP12.62□□□□□ -0.39
COL5A1-203ENST00000460264 TRBV7-3A0A075B6L6 115 aa12.61□□□□□ -0.39
COL5A1-203ENST00000460264 UBE2D3P61077 147 aa12.61□□□□□ -0.39
COL5A1-203ENST00000460264 UBE2D2P62837 147 aa12.61□□□□□ -0.39
COL5A1-203ENST00000460264 RPL36AP83881 106 aaKnown RBP12.61□□□□□ -0.39
COL5A1-203ENST00000460264 ZNF56Q15929 161 aa12.61□□□□□ -0.39
COL5A1-203ENST00000460264 SPANXN1Q5VSR9 72 aa12.61□□□□□ -0.39
COL5A1-203ENST00000460264 OR10G8Q8NGN5 311 aa12.61□□□□□ -0.39
COL5A1-203ENST00000460264 RPL36ALQ969Q0 106 aaKnown RBP12.61□□□□□ -0.39
COL5A1-203ENST00000460264 PDE6DO43924 150 aa12.6□□□□□ -0.39
COL5A1-203ENST00000460264 IFNA1P01562 189 aa12.6□□□□□ -0.39
COL5A1-203ENST00000460264 NIT1Q86X76 327 aa12.6□□□□□ -0.39
COL5A1-203ENST00000460264 TM2D2Q9BX73 214 aa12.6□□□□□ -0.39
COL5A1-203ENST00000460264 TRAV8-3A0A0A6YYJ7 113 aa12.59□□□□□ -0.39
COL5A1-203ENST00000460264 RAB19A4D1S5 217 aa12.59□□□□□ -0.39
COL5A1-203ENST00000460264 BCL2P10415 239 aa12.59□□□□□ -0.39
COL5A1-203ENST00000460264 GCSHP23434 173 aa12.59□□□□□ -0.39
COL5A1-203ENST00000460264 GNG4P50150 75 aa12.59□□□□□ -0.39
COL5A1-203ENST00000460264 TOR2AQ5JU69 321 aa12.59□□□□□ -0.39
COL5A1-203ENST00000460264 Q8N814 137 aa12.59□□□□□ -0.39
COL5A1-203ENST00000460264 NTN5Q8WTR8 489 aaPredicted RBP12.59□□□□□ -0.39
COL5A1-203ENST00000460264 URGCP-MRPS24S4R325 110 aa12.59□□□□□ -0.39
COL5A1-203ENST00000460264 TRBV20OR9-2A0A075B6H5 130 aa12.58□□□□□ -0.4
COL5A1-203ENST00000460264 C19orf71A6NCJ1 209 aa12.58□□□□□ -0.4
COL5A1-203ENST00000460264 GZMBP10144 247 aa12.58□□□□□ -0.4
COL5A1-203ENST00000460264 XGP55808 180 aa12.58□□□□□ -0.4
COL5A1-203ENST00000460264 SSTP61278 116 aa12.58□□□□□ -0.4
COL5A1-203ENST00000460264 NEXN-AS1Q8NBZ9 246 aa12.58□□□□□ -0.4
COL5A1-203ENST00000460264 SMIM12Q96EX1 92 aa12.58□□□□□ -0.4
COL5A1-203ENST00000460264 IGLV5-52A0A0A0MRZ9 124 aa12.57□□□□□ -0.4
COL5A1-203ENST00000460264 IGLC6P0CF74 106 aa12.57□□□□□ -0.4
COL5A1-203ENST00000460264 AKAP14Q86UN6 197 aa12.57□□□□□ -0.4
COL5A1-203ENST00000460264 C9orf62Q8N4C0 152 aa12.57□□□□□ -0.4
COL5A1-203ENST00000460264 AP1S3Q96PC3 154 aa12.57□□□□□ -0.4
COL5A1-203ENST00000460264 VAX2Q9UIW0 290 aa12.57□□□□□ -0.4
COL5A1-203ENST00000460264 KIF25-AS1Q9Y6Z4 181 aa12.57□□□□□ -0.4
COL5A1-203ENST00000460264 RPS20P60866 119 aaKnown RBP12.56□□□□□ -0.4
COL5A1-203ENST00000460264 WFDC2Q14508 124 aa12.56□□□□□ -0.4
COL5A1-203ENST00000460264 OR2D3Q8NGH3 330 aa12.56□□□□□ -0.4
COL5A1-203ENST00000460264 DAZAP1Q96EP5 407 aaKnown RBP12.56□□□□□ -0.4
COL5A1-203ENST00000460264 MED9Q9NWA0 146 aa12.56□□□□□ -0.4
COL5A1-203ENST00000460264 hCG_2014768A0A024R1R8 64 aa12.55□□□□□ -0.4
COL5A1-203ENST00000460264 RBFOX3A6NFN3 312 aa12.55□□□□□ -0.4
COL5A1-203ENST00000460264 F5H697 171 aa12.55□□□□□ -0.4
COL5A1-203ENST00000460264 FER1L6-AS1Q8NA97 138 aa12.55□□□□□ -0.4
COL5A1-203ENST00000460264 CHCHD7Q9BUK0 85 aa12.55□□□□□ -0.4
COL5A1-203ENST00000460264 TPPP3Q9BW30 176 aa12.55□□□□□ -0.4
COL5A1-203ENST00000460264 A0A087WX48 190 aa12.54□□□□□ -0.4
COL5A1-203ENST00000460264 TRBV6-8A0A0A6YYG3 113 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms