RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 ZFP2Q6ZN57 461 aa8.9□□□□□ -0.98
COL18A1-206ENST00000459895 Q6ZSN1 163 aa8.9□□□□□ -0.98
COL18A1-206ENST00000459895 COMMD7Q86VX2 200 aa8.9□□□□□ -0.98
COL18A1-206ENST00000459895 UBE2DNLQ8IWF7 75 aa8.9□□□□□ -0.98
COL18A1-206ENST00000459895 SLC25A29Q8N8R3 303 aa8.9□□□□□ -0.98
COL18A1-206ENST00000459895 AP1S3Q96PC3 154 aa8.9□□□□□ -0.98
COL18A1-206ENST00000459895 ICOSQ9Y6W8 199 aa8.9□□□□□ -0.98
COL18A1-206ENST00000459895 K7EQD1 137 aa8.89□□□□□ -0.99
COL18A1-206ENST00000459895 ADCYAP1P18509 176 aa8.89□□□□□ -0.99
COL18A1-206ENST00000459895 SLAQ13239 276 aa8.89□□□□□ -0.99
COL18A1-206ENST00000459895 RHOHQ15669 191 aa8.89□□□□□ -0.99
COL18A1-206ENST00000459895 LYZL1Q6UWQ5 148 aa8.89□□□□□ -0.99
COL18A1-206ENST00000459895 OSTCQ9NRP0 149 aa8.89□□□□□ -0.99
COL18A1-206ENST00000459895 V9GYV3 84 aa8.89□□□□□ -0.99
COL18A1-206ENST00000459895 A0A1W2PPQ1 181 aa8.88□□□□□ -0.99
COL18A1-206ENST00000459895 CRYGDP07320 174 aa8.88□□□□□ -0.99
COL18A1-206ENST00000459895 C14orf178Q8N769 122 aaPredicted RBP8.88□□□□□ -0.99
COL18A1-206ENST00000459895 CNFNQ9BYD5 112 aa8.88□□□□□ -0.99
COL18A1-206ENST00000459895 MSRB1Q9NZV6 116 aa8.88□□□□□ -0.99
COL18A1-206ENST00000459895 LINC00588Q9Y4M8 146 aa8.88□□□□□ -0.99
COL18A1-206ENST00000459895 TRBV6-4A0A1B0GX49 114 aa8.87□□□□□ -0.99
COL18A1-206ENST00000459895 CIDEAO60543 219 aa8.87□□□□□ -0.99
COL18A1-206ENST00000459895 LINC00694P0DN24 101 aa8.87□□□□□ -0.99
COL18A1-206ENST00000459895 SRIP30626 198 aa8.87□□□□□ -0.99
COL18A1-206ENST00000459895 CACNG7P62955 275 aa8.87□□□□□ -0.99
COL18A1-206ENST00000459895 ZNF56Q15929 161 aa8.87□□□□□ -0.99
COL18A1-206ENST00000459895 UQCC3Q6UW78 93 aa8.87□□□□□ -0.99
COL18A1-206ENST00000459895 C15orf54Q8N8G6 183 aa8.87□□□□□ -0.99
COL18A1-206ENST00000459895 A8MWL6 223 aa8.86□□□□□ -0.99
COL18A1-206ENST00000459895 F2Z2F3 143 aa8.86□□□□□ -0.99
COL18A1-206ENST00000459895 TSKUQ8WUA8 353 aa8.86□□□□□ -0.99
COL18A1-206ENST00000459895 PGLYRP4Q96LB8 373 aa8.86□□□□□ -0.99
COL18A1-206ENST00000459895 Q9UF83 564 aa8.86□□□□□ -0.99
COL18A1-206ENST00000459895 KIF25-AS1Q9Y6Z4 181 aa8.86□□□□□ -0.99
COL18A1-206ENST00000459895 FRAS1Q86XX4 4008 aa8.86□□□□□ -0.99
COL18A1-206ENST00000459895 LINC00862A6NCI5 91 aa8.85□□□□□ -0.99
COL18A1-206ENST00000459895 HIGD1CA8MV81 97 aa8.85□□□□□ -0.99
COL18A1-206ENST00000459895 MGPP08493 103 aa8.85□□□□□ -0.99
COL18A1-206ENST00000459895 MRPL23Q16540 153 aaKnown RBP8.85□□□□□ -0.99
COL18A1-206ENST00000459895 ESRGQ1W209 222 aa8.85□□□□□ -0.99
COL18A1-206ENST00000459895 RNF212Q495C1 297 aa8.85□□□□□ -0.99
COL18A1-206ENST00000459895 OR10G8Q8NGN5 311 aa8.85□□□□□ -0.99
COL18A1-206ENST00000459895 PRADC1Q9BSG0 188 aa8.85□□□□□ -0.99
COL18A1-206ENST00000459895 GAGE12JA6NER3 117 aa8.84□□□□□ -0.99
COL18A1-206ENST00000459895 EVI2AP22794 236 aa8.84□□□□□ -0.99
COL18A1-206ENST00000459895 CCL18P55774 89 aa8.84□□□□□ -0.99
COL18A1-206ENST00000459895 LINC00315P59091 139 aa8.84□□□□□ -0.99
COL18A1-206ENST00000459895 GAGE1Q13065 139 aa8.84□□□□□ -0.99
COL18A1-206ENST00000459895 GAGE4Q13068 117 aa8.84□□□□□ -0.99
COL18A1-206ENST00000459895 GAGE5Q13069 117 aa8.84□□□□□ -0.99
COL18A1-206ENST00000459895 GAGE13Q4V321 117 aa8.84□□□□□ -0.99
COL18A1-206ENST00000459895 NEGR1Q7Z3B1 354 aa8.84□□□□□ -0.99
COL18A1-206ENST00000459895 GFRA4Q9GZZ7 299 aa8.84□□□□□ -0.99
COL18A1-206ENST00000459895 MRPS16Q9Y3D3 137 aaKnown RBP8.84□□□□□ -0.99
COL18A1-206ENST00000459895 IGLV2-18A0A075B6J9 118 aa8.83□□□□□ -1
COL18A1-206ENST00000459895 TRGC1P0CF51 173 aa8.83□□□□□ -1
COL18A1-206ENST00000459895 SMIM17P0DL12 118 aa8.83□□□□□ -1
COL18A1-206ENST00000459895 NTF3P20783 257 aa8.83□□□□□ -1
COL18A1-206ENST00000459895 PNRC1Q12796 327 aaPredicted RBP8.83□□□□□ -1
COL18A1-206ENST00000459895 TWIST1Q15672 202 aa8.83□□□□□ -1
COL18A1-206ENST00000459895 ZNRF2Q8NHG8 242 aa8.83□□□□□ -1
COL18A1-206ENST00000459895 TMEM218A2RU14 115 aa8.82□□□□□ -1
COL18A1-206ENST00000459895 FAM3BP58499 235 aaPredicted RBP8.82□□□□□ -1
COL18A1-206ENST00000459895 RAB4BP61018 213 aa8.82□□□□□ -1
COL18A1-206ENST00000459895 SUMO4Q6EEV6 95 aa8.82□□□□□ -1
COL18A1-206ENST00000459895 UPK3BQ9BT76 320 aa8.82□□□□□ -1
COL18A1-206ENST00000459895 DPH3P1Q9H4G8 78 aa8.82□□□□□ -1
COL18A1-206ENST00000459895 SMIM27A0A1W2PRY6 76 aa8.81□□□□□ -1
COL18A1-206ENST00000459895 FAM231BA6NCW3 169 aa8.81□□□□□ -1
COL18A1-206ENST00000459895 F8W036 122 aa8.81□□□□□ -1
COL18A1-206ENST00000459895 FOXA3P55318 350 aaPredicted RBP8.81□□□□□ -1
COL18A1-206ENST00000459895 WDR73Q6P4I2 378 aa8.81□□□□□ -1
COL18A1-206ENST00000459895 LYPD5Q6UWN5 251 aa8.81□□□□□ -1
COL18A1-206ENST00000459895 NEXN-AS1Q8NBZ9 246 aa8.81□□□□□ -1
COL18A1-206ENST00000459895 NUP35Q8NFH5 326 aa8.81□□□□□ -1
COL18A1-206ENST00000459895 BORCS7Q96B45 105 aa8.81□□□□□ -1
COL18A1-206ENST00000459895 NAT8BQ9UHF3 227 aa8.81□□□□□ -1
COL18A1-206ENST00000459895 DNAH2Q9P225 4427 aa8.81□□□□□ -1
COL18A1-206ENST00000459895 TRBV10-1A0A0K0K1A3 114 aa8.8□□□□□ -1
COL18A1-206ENST00000459895 A0A1B0GUT8 65 aa8.8□□□□□ -1
COL18A1-206ENST00000459895 F5H697 171 aa8.8□□□□□ -1
COL18A1-206ENST00000459895 WFDC10BQ8IUB3 73 aa8.8□□□□□ -1
COL18A1-206ENST00000459895 KRTAP1-5Q9BYS1 174 aa8.8□□□□□ -1
COL18A1-206ENST00000459895 TRAV26-2A0A0B4J265 109 aa8.79□□□□□ -1
COL18A1-206ENST00000459895 SH2D6Q7Z4S9 175 aa8.79□□□□□ -1
COL18A1-206ENST00000459895 SEC11CQ9BY50 192 aa8.79□□□□□ -1
COL18A1-206ENST00000459895 DNAH10Q8IVF4 4471 aa8.79□□□□□ -1
COL18A1-206ENST00000459895 M0QY20 66 aa8.78□□□□□ -1
COL18A1-206ENST00000459895 M0R2N4 97 aa8.78□□□□□ -1
COL18A1-206ENST00000459895 TIRAPP58753 221 aa8.78□□□□□ -1
COL18A1-206ENST00000459895 UBE2D3P61077 147 aa8.78□□□□□ -1
COL18A1-206ENST00000459895 UBE2D2P62837 147 aa8.78□□□□□ -1
COL18A1-206ENST00000459895 RPL36AP83881 106 aaKnown RBP8.78□□□□□ -1
COL18A1-206ENST00000459895 ATP6V0E2Q8NHE4 81 aa8.78□□□□□ -1
COL18A1-206ENST00000459895 RPL36ALQ969Q0 106 aaKnown RBP8.78□□□□□ -1
COL18A1-206ENST00000459895 PPP1R2P9O14990 202 aa8.77□□□□□ -1.01
COL18A1-206ENST00000459895 MRPL54Q6P161 138 aaKnown RBP8.77□□□□□ -1.01
COL18A1-206ENST00000459895 Q6ZR54 194 aa8.77□□□□□ -1.01
COL18A1-206ENST00000459895 GTSF1LQ9H1H1 148 aa8.77□□□□□ -1.01
COL18A1-206ENST00000459895 CARHSP1Q9Y2V2 147 aaKnown RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms