RNA–Protein interactions for RNA: ENST00000455113.6

COPS7A-202, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-202ENST00000455113 F2Z2F3 143 aa12.47□□□□□ -0.41
COPS7A-202ENST00000455113 CTRLP40313 264 aa12.47□□□□□ -0.41
COPS7A-202ENST00000455113 Q6ZTI0 123 aa12.47□□□□□ -0.41
COPS7A-202ENST00000455113 OR10AG1Q8NH19 301 aa12.46□□□□□ -0.41
COPS7A-202ENST00000455113 PHLDA3Q9Y5J5 127 aa12.46□□□□□ -0.41
COPS7A-202ENST00000455113 SPINK4O60575 86 aa12.45□□□□□ -0.42
COPS7A-202ENST00000455113 SSTP61278 116 aa12.45□□□□□ -0.42
COPS7A-202ENST00000455113 LGALS9BQ3B8N2 356 aa12.45□□□□□ -0.42
COPS7A-202ENST00000455113 ELOBQ15370 118 aa12.44□□□□□ -0.42
COPS7A-202ENST00000455113 BORCS7Q96B45 105 aa12.44□□□□□ -0.42
COPS7A-202ENST00000455113 C18orf15Q96N68 181 aa12.44□□□□□ -0.42
COPS7A-202ENST00000455113 SPXQ9BT56 116 aa12.44□□□□□ -0.42
COPS7A-202ENST00000455113 TRAV9-1A0A075B6T8 112 aa12.43□□□□□ -0.42
COPS7A-202ENST00000455113 TRAV26-1A0A087WT03 109 aa12.43□□□□□ -0.42
COPS7A-202ENST00000455113 A0A1B0GUT8 65 aa12.43□□□□□ -0.42
COPS7A-202ENST00000455113 M0R381 172 aa12.43□□□□□ -0.42
COPS7A-202ENST00000455113 CCL18P55774 89 aa12.43□□□□□ -0.42
COPS7A-202ENST00000455113 SPANXN1Q5VSR9 72 aa12.43□□□□□ -0.42
COPS7A-202ENST00000455113 BTF3L4Q96K17 158 aa12.43□□□□□ -0.42
COPS7A-202ENST00000455113 CNFNQ9BYD5 112 aa12.43□□□□□ -0.42
COPS7A-202ENST00000455113 NTF3P20783 257 aa12.42□□□□□ -0.42
COPS7A-202ENST00000455113 CACNG7P62955 275 aa12.42□□□□□ -0.42
COPS7A-202ENST00000455113 MRPL54Q6P161 138 aaKnown RBP12.42□□□□□ -0.42
COPS7A-202ENST00000455113 YPEL4Q96NS1 127 aa12.42□□□□□ -0.42
COPS7A-202ENST00000455113 KMT2AQ03164 3969 aa12.42□□□□□ -0.42
COPS7A-202ENST00000455113 TGIF2-C20orf24A0A0A6YYL0 155 aa12.42□□□□□ -0.42
COPS7A-202ENST00000455113 A0A0J9YY99 117 aa12.42□□□□□ -0.42
COPS7A-202ENST00000455113 M0R2P5 195 aa12.42□□□□□ -0.42
COPS7A-202ENST00000455113 DMRTA1Q5VZB9 504 aa12.42□□□□□ -0.42
COPS7A-202ENST00000455113 WDR73Q6P4I2 378 aa12.42□□□□□ -0.42
COPS7A-202ENST00000455113 ZFP82Q8N141 532 aa12.42□□□□□ -0.42
COPS7A-202ENST00000455113 MRPL16Q9NX20 251 aaKnown RBP12.42□□□□□ -0.42
COPS7A-202ENST00000455113 MSRB1Q9NZV6 116 aa12.42□□□□□ -0.42
COPS7A-202ENST00000455113 TWIST1Q15672 202 aa12.41□□□□□ -0.42
COPS7A-202ENST00000455113 ZNF876PQ49A33 203 aa12.41□□□□□ -0.42
COPS7A-202ENST00000455113 TRBV24-1A0A075B6N3 115 aa12.4□□□□□ -0.42
COPS7A-202ENST00000455113 H3BNG1 76 aa12.4□□□□□ -0.42
COPS7A-202ENST00000455113 NXPH4O95158 308 aa12.4□□□□□ -0.42
COPS7A-202ENST00000455113 HOXA5P20719 270 aa12.4□□□□□ -0.42
COPS7A-202ENST00000455113 RIGQ13278 110 aa12.4□□□□□ -0.42
COPS7A-202ENST00000455113 SYT8Q8NBV8 401 aa12.4□□□□□ -0.42
COPS7A-202ENST00000455113 ATP5L2Q7Z4Y8 100 aa12.4□□□□□ -0.43
COPS7A-202ENST00000455113 PTH2Q96A98 100 aa12.4□□□□□ -0.43
COPS7A-202ENST00000455113 A0A1B0GXF2 115 aa12.39□□□□□ -0.43
COPS7A-202ENST00000455113 M0R2N4 97 aa12.39□□□□□ -0.43
COPS7A-202ENST00000455113 CAMPP49913 170 aa12.39□□□□□ -0.43
COPS7A-202ENST00000455113 SLAQ13239 276 aa12.39□□□□□ -0.43
COPS7A-202ENST00000455113 RASL10AQ92737 203 aa12.39□□□□□ -0.43
COPS7A-202ENST00000455113 IGLV2-18A0A075B6J9 118 aa12.38□□□□□ -0.43
COPS7A-202ENST00000455113 HBBP68871 147 aa12.38□□□□□ -0.43
COPS7A-202ENST00000455113 A0A1B0GW15 77 aa12.37□□□□□ -0.43
COPS7A-202ENST00000455113 IGHV3-53P01767 116 aa12.37□□□□□ -0.43
COPS7A-202ENST00000455113 COLCA2A8K830 154 aa12.37□□□□□ -0.43
COPS7A-202ENST00000455113 PIK3CD-AS1Q5SR53 167 aa12.37□□□□□ -0.43
COPS7A-202ENST00000455113 JPT2Q9H910 190 aa12.37□□□□□ -0.43
COPS7A-202ENST00000455113 TRGV4A0A0C4DH28 118 aa12.36□□□□□ -0.43
COPS7A-202ENST00000455113 RASL11AQ6T310 242 aa12.36□□□□□ -0.43
COPS7A-202ENST00000455113 PRO0255Q9UI72 69 aa12.36□□□□□ -0.43
COPS7A-202ENST00000455113 PAX4O43316 350 aa12.35□□□□□ -0.43
COPS7A-202ENST00000455113 S100A8P05109 93 aa12.35□□□□□ -0.43
COPS7A-202ENST00000455113 TRGC1P0CF51 173 aa12.35□□□□□ -0.43
COPS7A-202ENST00000455113 EVI2AP22794 236 aa12.35□□□□□ -0.43
COPS7A-202ENST00000455113 AP1S3Q96PC3 154 aa12.35□□□□□ -0.43
COPS7A-202ENST00000455113 HHLA3Q9XRX5 114 aa12.35□□□□□ -0.43
COPS7A-202ENST00000455113 NACAE9PAV3 2078 aa12.34□□□□□ -0.43
COPS7A-202ENST00000455113 RAB4BP61018 213 aa12.34□□□□□ -0.43
COPS7A-202ENST00000455113 C14orf178Q8N769 122 aaPredicted RBP12.34□□□□□ -0.43
COPS7A-202ENST00000455113 LINC00336Q6ZUF6 198 aa12.34□□□□□ -0.43
COPS7A-202ENST00000455113 TMEM191AQ9H0A3 160 aa12.34□□□□□ -0.43
COPS7A-202ENST00000455113 LINC00588Q9Y4M8 146 aa12.34□□□□□ -0.43
COPS7A-202ENST00000455113 ICOSQ9Y6W8 199 aa12.34□□□□□ -0.43
COPS7A-202ENST00000455113 A0A087WWL8 130 aa12.33□□□□□ -0.44
COPS7A-202ENST00000455113 A8MWV9 139 aa12.33□□□□□ -0.44
COPS7A-202ENST00000455113 SMIM15Q7Z3B0 74 aa12.33□□□□□ -0.44
COPS7A-202ENST00000455113 OR4C5Q8NGB2 326 aa12.33□□□□□ -0.44
COPS7A-202ENST00000455113 SAMD10Q9BYL1 202 aa12.33□□□□□ -0.44
COPS7A-202ENST00000455113 TRAV4A0A0B4J268 109 aa12.32□□□□□ -0.44
COPS7A-202ENST00000455113 CFAP126Q5VTH2 177 aa12.32□□□□□ -0.44
COPS7A-202ENST00000455113 TMEM136Q6ZRR5 245 aa12.32□□□□□ -0.44
COPS7A-202ENST00000455113 GATD1Q8NB37 220 aa12.32□□□□□ -0.44
COPS7A-202ENST00000455113 VSIG2Q96IQ7 327 aa12.32□□□□□ -0.44
COPS7A-202ENST00000455113 RS1O15537 224 aa12.31□□□□□ -0.44
COPS7A-202ENST00000455113 CRYGDP07320 174 aa12.31□□□□□ -0.44
COPS7A-202ENST00000455113 RAB5AP20339 215 aa12.31□□□□□ -0.44
COPS7A-202ENST00000455113 COX19Q49B96 90 aa12.31□□□□□ -0.44
COPS7A-202ENST00000455113 FAM74A4Q5TZK3 123 aa12.31□□□□□ -0.44
COPS7A-202ENST00000455113 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.31□□□□□ -0.44
COPS7A-202ENST00000455113 GNB1LQ9BYB4 327 aa12.31□□□□□ -0.44
COPS7A-202ENST00000455113 DPH3P1Q9H4G8 78 aa12.31□□□□□ -0.44
COPS7A-202ENST00000455113 KIF25-AS1Q9Y6Z4 181 aa12.31□□□□□ -0.44
COPS7A-202ENST00000455113 VPS13DQ5THJ4 4388 aa12.31□□□□□ -0.44
COPS7A-202ENST00000455113 A0A096LPF7 62 aa12.31□□□□□ -0.44
COPS7A-202ENST00000455113 SMIM17P0DL12 118 aa12.31□□□□□ -0.44
COPS7A-202ENST00000455113 CRYBA4P53673 196 aa12.31□□□□□ -0.44
COPS7A-202ENST00000455113 FHL2Q14192 279 aa12.31□□□□□ -0.44
COPS7A-202ENST00000455113 ZNRF2Q8NHG8 242 aa12.31□□□□□ -0.44
COPS7A-202ENST00000455113 ZNF479Q96JC4 524 aa12.31□□□□□ -0.44
COPS7A-202ENST00000455113 MRPL23Q16540 153 aaKnown RBP12.3□□□□□ -0.44
COPS7A-202ENST00000455113 AMN1Q8IY45 258 aa12.3□□□□□ -0.44
COPS7A-202ENST00000455113 Q9H8V8 135 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 136.4 ms