RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 SCRT2Q9NQ03 307 aa11.04□□□□□ -0.64
NCKIPSD-208ENST00000454134 ABCA13Q86UQ4 5058 aa11.03□□□□□ -0.64
NCKIPSD-208ENST00000454134 PSCAO43653 123 aa11.03□□□□□ -0.64
NCKIPSD-208ENST00000454134 PFDN1O60925 122 aa11.03□□□□□ -0.64
NCKIPSD-208ENST00000454134 H2AFB1P0C5Y9 115 aa11.03□□□□□ -0.64
NCKIPSD-208ENST00000454134 TPT1P13693 172 aaKnown RBP11.03□□□□□ -0.64
NCKIPSD-208ENST00000454134 CDPF1Q6NVV7 123 aa11.03□□□□□ -0.64
NCKIPSD-208ENST00000454134 Q8N1X5 172 aa11.03□□□□□ -0.64
NCKIPSD-208ENST00000454134 DNAH5Q8TE73 4624 aa11.03□□□□□ -0.64
NCKIPSD-208ENST00000454134 RHODO00212 210 aa11.02□□□□□ -0.65
NCKIPSD-208ENST00000454134 KRTAP10-1P60331 282 aa11.02□□□□□ -0.65
NCKIPSD-208ENST00000454134 EIF5AP63241 154 aaKnown RBP11.02□□□□□ -0.65
NCKIPSD-208ENST00000454134 RPL19P84098 196 aaKnown RBP11.02□□□□□ -0.65
NCKIPSD-208ENST00000454134 SFRP2Q96HF1 295 aa11.02□□□□□ -0.65
NCKIPSD-208ENST00000454134 S100A9P06702 114 aaKnown RBP11.01□□□□□ -0.65
NCKIPSD-208ENST00000454134 CCL20P78556 96 aa11.01□□□□□ -0.65
NCKIPSD-208ENST00000454134 BAGE2Q86Y30 109 aa11.01□□□□□ -0.65
NCKIPSD-208ENST00000454134 ZFP82Q8N141 532 aa11.01□□□□□ -0.65
NCKIPSD-208ENST00000454134 BOLA1Q9Y3E2 137 aa11.01□□□□□ -0.65
NCKIPSD-208ENST00000454134 LRCOL1A6NCL2 159 aa11□□□□□ -0.65
NCKIPSD-208ENST00000454134 MLST8Q9BVC4 326 aa11□□□□□ -0.65
NCKIPSD-208ENST00000454134 PRR27Q6MZM9 219 aa10.99□□□□□ -0.65
NCKIPSD-208ENST00000454134 GNG13Q9P2W3 67 aa10.99□□□□□ -0.65
NCKIPSD-208ENST00000454134 MUC21A0A0G2JKD1 596 aa10.98□□□□□ -0.65
NCKIPSD-208ENST00000454134 MUC21A0A140T8X8 626 aa10.98□□□□□ -0.65
NCKIPSD-208ENST00000454134 XGP55808 180 aa10.98□□□□□ -0.65
NCKIPSD-208ENST00000454134 DAZ4Q86SG3 579 aaKnown RBP10.98□□□□□ -0.65
NCKIPSD-208ENST00000454134 OR10AG1Q8NH19 301 aa10.98□□□□□ -0.65
NCKIPSD-208ENST00000454134 DAZ3Q9NR90 486 aaKnown RBP10.98□□□□□ -0.65
NCKIPSD-208ENST00000454134 A0A087WWC5 75 aa10.97□□□□□ -0.65
NCKIPSD-208ENST00000454134 RPL35P42766 123 aaKnown RBP10.97□□□□□ -0.65
NCKIPSD-208ENST00000454134 DERL1Q9BUN8 251 aa10.97□□□□□ -0.65
NCKIPSD-208ENST00000454134 GCSHP23434 173 aa10.96□□□□□ -0.65
NCKIPSD-208ENST00000454134 SSTP61278 116 aa10.96□□□□□ -0.65
NCKIPSD-208ENST00000454134 LAGE3Q14657 143 aa10.96□□□□□ -0.65
NCKIPSD-208ENST00000454134 MANBALQ9NQG1 85 aa10.96□□□□□ -0.65
NCKIPSD-208ENST00000454134 IGLV5-52A0A0A0MRZ9 124 aa10.95□□□□□ -0.66
NCKIPSD-208ENST00000454134 Q8N814 137 aa10.95□□□□□ -0.66
NCKIPSD-208ENST00000454134 TRAV1-1A0A0B4J248 108 aa10.94□□□□□ -0.66
NCKIPSD-208ENST00000454134 CXCL1P09341 107 aa10.94□□□□□ -0.66
NCKIPSD-208ENST00000454134 RPL36AP83881 106 aaKnown RBP10.94□□□□□ -0.66
NCKIPSD-208ENST00000454134 WFDC2Q14508 124 aa10.94□□□□□ -0.66
NCKIPSD-208ENST00000454134 ZNF56Q15929 161 aa10.94□□□□□ -0.66
NCKIPSD-208ENST00000454134 RPL36ALQ969Q0 106 aaKnown RBP10.94□□□□□ -0.66
NCKIPSD-208ENST00000454134 C11orf52Q96A22 123 aa10.94□□□□□ -0.66
NCKIPSD-208ENST00000454134 TRBV10-1A0A0K0K1A3 114 aa10.93□□□□□ -0.66
NCKIPSD-208ENST00000454134 LECT2O14960 151 aa10.93□□□□□ -0.66
NCKIPSD-208ENST00000454134 SNAI2O43623 268 aa10.93□□□□□ -0.66
NCKIPSD-208ENST00000454134 RAB5CP51148 216 aa10.93□□□□□ -0.66
NCKIPSD-208ENST00000454134 UBE2D3P61077 147 aa10.93□□□□□ -0.66
NCKIPSD-208ENST00000454134 UBE2D2P62837 147 aa10.93□□□□□ -0.66
NCKIPSD-208ENST00000454134 HAMPP81172 84 aa10.93□□□□□ -0.66
NCKIPSD-208ENST00000454134 CENPWQ5EE01 88 aa10.93□□□□□ -0.66
NCKIPSD-208ENST00000454134 SPANXN1Q5VSR9 72 aa10.93□□□□□ -0.66
NCKIPSD-208ENST00000454134 EIF5AL1Q6IS14 154 aaKnown RBP10.93□□□□□ -0.66
NCKIPSD-208ENST00000454134 NIT1Q86X76 327 aa10.93□□□□□ -0.66
NCKIPSD-208ENST00000454134 TCTE3Q8IZS6 198 aa10.93□□□□□ -0.66
NCKIPSD-208ENST00000454134 DNAJC30Q96LL9 226 aa10.93□□□□□ -0.66
NCKIPSD-208ENST00000454134 SSBP4Q9BWG4 385 aaPredicted RBP10.93□□□□□ -0.66
NCKIPSD-208ENST00000454134 TM2D2Q9BX73 214 aa10.93□□□□□ -0.66
NCKIPSD-208ENST00000454134 URGCP-MRPS24S4R325 110 aa10.93□□□□□ -0.66
NCKIPSD-208ENST00000454134 TRBV7-3A0A075B6L6 115 aa10.92□□□□□ -0.66
NCKIPSD-208ENST00000454134 TRAV8-3A0A0A6YYJ7 113 aa10.92□□□□□ -0.66
NCKIPSD-208ENST00000454134 RAB19A4D1S5 217 aa10.92□□□□□ -0.66
NCKIPSD-208ENST00000454134 OR5AL1P0C617 328 aa10.92□□□□□ -0.66
NCKIPSD-208ENST00000454134 SULT1A2P50226 295 aa10.92□□□□□ -0.66
NCKIPSD-208ENST00000454134 RAB4BP61018 213 aa10.92□□□□□ -0.66
NCKIPSD-208ENST00000454134 NTN5Q8WTR8 489 aaPredicted RBP10.92□□□□□ -0.66
NCKIPSD-208ENST00000454134 EPM2AB3EWF7 344 aa10.91□□□□□ -0.66
NCKIPSD-208ENST00000454134 TEX46H3BTG2 121 aa10.91□□□□□ -0.66
NCKIPSD-208ENST00000454134 IGLV2-8P01709 118 aa10.91□□□□□ -0.66
NCKIPSD-208ENST00000454134 GZMBP10144 247 aa10.91□□□□□ -0.66
NCKIPSD-208ENST00000454134 KLK12Q9UKR0 248 aa10.91□□□□□ -0.66
NCKIPSD-208ENST00000454134 RBFOX3A6NFN3 312 aa10.9□□□□□ -0.66
NCKIPSD-208ENST00000454134 F5H697 171 aa10.9□□□□□ -0.66
NCKIPSD-208ENST00000454134 TOR2AQ5JU69 321 aa10.9□□□□□ -0.66
NCKIPSD-208ENST00000454134 NEXN-AS1Q8NBZ9 246 aa10.9□□□□□ -0.66
NCKIPSD-208ENST00000454134 OR10G8Q8NGN5 311 aa10.9□□□□□ -0.66
NCKIPSD-208ENST00000454134 A0A087WX48 190 aa10.89□□□□□ -0.67
NCKIPSD-208ENST00000454134 C1QBP02746 253 aa10.89□□□□□ -0.67
NCKIPSD-208ENST00000454134 SMR3BP02814 79 aaPredicted RBP10.89□□□□□ -0.67
NCKIPSD-208ENST00000454134 MEF2BQ02080 365 aaPredicted RBP10.89□□□□□ -0.67
NCKIPSD-208ENST00000454134 OR2D3Q8NGH3 330 aa10.89□□□□□ -0.67
NCKIPSD-208ENST00000454134 BAALCQ8WXS3 180 aa10.89□□□□□ -0.67
NCKIPSD-208ENST00000454134 TPPP3Q9BW30 176 aa10.89□□□□□ -0.67
NCKIPSD-208ENST00000454134 GNG4P50150 75 aa10.88□□□□□ -0.67
NCKIPSD-208ENST00000454134 SLC51BQ86UW2 128 aa10.88□□□□□ -0.67
NCKIPSD-208ENST00000454134 UBE2WQ96B02 151 aa10.88□□□□□ -0.67
NCKIPSD-208ENST00000454134 DAZAP1Q96EP5 407 aaKnown RBP10.88□□□□□ -0.67
NCKIPSD-208ENST00000454134 MED9Q9NWA0 146 aa10.88□□□□□ -0.67
NCKIPSD-208ENST00000454134 KIF25-AS1Q9Y6Z4 181 aa10.88□□□□□ -0.67
NCKIPSD-208ENST00000454134 TRBV20OR9-2A0A075B6H5 130 aa10.87□□□□□ -0.67
NCKIPSD-208ENST00000454134 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.87□□□□□ -0.67
NCKIPSD-208ENST00000454134 IGKV2D-24A0A075B6R9 120 aa10.87□□□□□ -0.67
NCKIPSD-208ENST00000454134 TRBV6-8A0A0A6YYG3 113 aa10.87□□□□□ -0.67
NCKIPSD-208ENST00000454134 C19orf71A6NCJ1 209 aa10.87□□□□□ -0.67
NCKIPSD-208ENST00000454134 TMEM262E9PQX1 116 aa10.87□□□□□ -0.67
NCKIPSD-208ENST00000454134 PDE6DO43924 150 aa10.87□□□□□ -0.67
NCKIPSD-208ENST00000454134 Q5VSD8 79 aa10.87□□□□□ -0.67
NCKIPSD-208ENST00000454134 Q6ZNX1 250 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 151.4 ms