RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 TRAV7A0A075B6U4 112 aa2.63□□□□□ -1.99
HMGB3P8-201ENST00000449709 IGHV4-61A0A0C4DH41 118 aa2.63□□□□□ -1.99
HMGB3P8-201ENST00000449709 A0A0J9YXY3 114 aa2.63□□□□□ -1.99
HMGB3P8-201ENST00000449709 DNAJC9-AS1A6NH13 148 aa2.63□□□□□ -1.99
HMGB3P8-201ENST00000449709 C12orf77C9JDV5 145 aa2.63□□□□□ -1.99
HMGB3P8-201ENST00000449709 PRAC2D3DTV9 90 aa2.63□□□□□ -1.99
HMGB3P8-201ENST00000449709 E7EUB6 86 aa2.63□□□□□ -1.99
HMGB3P8-201ENST00000449709 IGHV4-59P01825 116 aa2.63□□□□□ -1.99
HMGB3P8-201ENST00000449709 FXYD7P58549 80 aa2.63□□□□□ -1.99
HMGB3P8-201ENST00000449709 TSPEAR-AS2P59090 65 aa2.63□□□□□ -1.99
HMGB3P8-201ENST00000449709 NSUN5P1Q3KNT7 163 aa2.63□□□□□ -1.99
HMGB3P8-201ENST00000449709 C10orf113Q5VZT2 155 aa2.63□□□□□ -1.99
HMGB3P8-201ENST00000449709 SFTA2Q6UW10 78 aa2.63□□□□□ -1.99
HMGB3P8-201ENST00000449709 LYZL1Q6UWQ5 148 aa2.63□□□□□ -1.99
HMGB3P8-201ENST00000449709 SCGB1D4Q6XE38 83 aa2.63□□□□□ -1.99
HMGB3P8-201ENST00000449709 VMO1Q7Z5L0 202 aa2.63□□□□□ -1.99
HMGB3P8-201ENST00000449709 DYNAPQ8N1N2 210 aa2.63□□□□□ -1.99
HMGB3P8-201ENST00000449709 C14orf178Q8N769 122 aaPredicted RBP2.63□□□□□ -1.99
HMGB3P8-201ENST00000449709 DEFB118Q96PH6 123 aa2.63□□□□□ -1.99
HMGB3P8-201ENST00000449709 Q9H3A6 140 aa2.63□□□□□ -1.99
HMGB3P8-201ENST00000449709 KNTC1P50748 2209 aa2.62□□□□□ -1.99
HMGB3P8-201ENST00000449709 ZNF407Q9C0G0 2248 aa2.62□□□□□ -1.99
HMGB3P8-201ENST00000449709 A0A087WZ39 114 aa2.62□□□□□ -1.99
HMGB3P8-201ENST00000449709 IGHV5-10-1A0A0J9YXX1 117 aa2.62□□□□□ -1.99
HMGB3P8-201ENST00000449709 J3QT63 122 aa2.62□□□□□ -1.99
HMGB3P8-201ENST00000449709 LEPROTO15243 131 aa2.62□□□□□ -1.99
HMGB3P8-201ENST00000449709 TIMM17BO60830 172 aa2.62□□□□□ -1.99
HMGB3P8-201ENST00000449709 ERC2-IT1O76042 136 aa2.62□□□□□ -1.99
HMGB3P8-201ENST00000449709 NDUFA3O95167 84 aa2.62□□□□□ -1.99
HMGB3P8-201ENST00000449709 COX6CP09669 75 aa2.62□□□□□ -1.99
HMGB3P8-201ENST00000449709 ZNF80P51504 273 aaPredicted RBP2.62□□□□□ -1.99
HMGB3P8-201ENST00000449709 DSCR9P59020 149 aa2.62□□□□□ -1.99
HMGB3P8-201ENST00000449709 SNRPD3P62318 126 aaKnown RBP2.62□□□□□ -1.99
HMGB3P8-201ENST00000449709 NNATQ16517 81 aa2.62□□□□□ -1.99
HMGB3P8-201ENST00000449709 Q1T7F1 81 aa2.62□□□□□ -1.99
HMGB3P8-201ENST00000449709 ORMDL2Q53FV1 153 aa2.62□□□□□ -1.99
HMGB3P8-201ENST00000449709 SPINK9Q5DT21 86 aa2.62□□□□□ -1.99
HMGB3P8-201ENST00000449709 C9orf47Q6ZRZ4 202 aa2.62□□□□□ -1.99
HMGB3P8-201ENST00000449709 LINC00305Q7Z4B0 112 aa2.62□□□□□ -1.99
HMGB3P8-201ENST00000449709 KTN1-AS1Q86SY8 53 aa2.62□□□□□ -1.99
HMGB3P8-201ENST00000449709 TMEM61Q8N0U2 210 aa2.62□□□□□ -1.99
HMGB3P8-201ENST00000449709 C6orf223Q8N319 242 aa2.62□□□□□ -1.99
HMGB3P8-201ENST00000449709 SMIM2Q9BVW6 85 aa2.62□□□□□ -1.99
HMGB3P8-201ENST00000449709 CXXC4Q9H2H0 198 aa2.62□□□□□ -1.99
HMGB3P8-201ENST00000449709 RBM12B-AS1Q9P1G2 102 aa2.62□□□□□ -1.99
HMGB3P8-201ENST00000449709 CTSZQ9UBR2 303 aa2.62□□□□□ -1.99
HMGB3P8-201ENST00000449709 LSM7Q9UK45 103 aaKnown RBP2.62□□□□□ -1.99
HMGB3P8-201ENST00000449709 Q9Y3F1 56 aa2.62□□□□□ -1.99
HMGB3P8-201ENST00000449709 TIMM8BQ9Y5J9 83 aaPredicted RBP2.62□□□□□ -1.99
HMGB3P8-201ENST00000449709 FER1L5A0AVI2 2057 aa2.62□□□□□ -1.99
HMGB3P8-201ENST00000449709 DOCK7Q96N67 2140 aa2.62□□□□□ -1.99
HMGB3P8-201ENST00000449709 DSCAMO60469 2012 aa2.61□□□□□ -1.99
HMGB3P8-201ENST00000449709 A0A0C4DFX4 3053 aa2.61□□□□□ -1.99
HMGB3P8-201ENST00000449709 TMEM30CPA0ZSE6 113 aa2.61□□□□□ -1.99
HMGB3P8-201ENST00000449709 RBMY1BA6NDE4 496 aaKnown RBP2.61□□□□□ -1.99
HMGB3P8-201ENST00000449709 RBMY1EA6NEQ0 496 aaKnown RBP2.61□□□□□ -1.99
HMGB3P8-201ENST00000449709 E7EQL1 145 aa2.61□□□□□ -1.99
HMGB3P8-201ENST00000449709 SMKR1H3BMG3 65 aa2.61□□□□□ -1.99
HMGB3P8-201ENST00000449709 I3L3M4 83 aa2.61□□□□□ -1.99
HMGB3P8-201ENST00000449709 M0R381 172 aa2.61□□□□□ -1.99
HMGB3P8-201ENST00000449709 COX7A2LO14548 114 aa2.61□□□□□ -1.99
HMGB3P8-201ENST00000449709 NXPH4O95158 308 aa2.61□□□□□ -1.99
HMGB3P8-201ENST00000449709 GAS8-AS1O95177 125 aa2.61□□□□□ -1.99
HMGB3P8-201ENST00000449709 RBMY1DP0C7P1 496 aaKnown RBP2.61□□□□□ -1.99
HMGB3P8-201ENST00000449709 RBMY1A1P0DJD3 496 aaKnown RBP2.61□□□□□ -1.99
HMGB3P8-201ENST00000449709 RBMY1CP0DJD4 496 aa2.61□□□□□ -1.99
HMGB3P8-201ENST00000449709 PLGLAQ15195 96 aa2.61□□□□□ -1.99
HMGB3P8-201ENST00000449709 RBMY1FQ15415 496 aaKnown RBP2.61□□□□□ -1.99
HMGB3P8-201ENST00000449709 SS18Q15532 418 aa2.61□□□□□ -1.99
HMGB3P8-201ENST00000449709 ZNF876PQ49A33 203 aa2.61□□□□□ -1.99
HMGB3P8-201ENST00000449709 PHF5AQ7RTV0 110 aaKnown RBP2.61□□□□□ -1.99
HMGB3P8-201ENST00000449709 MRPL55Q7Z7F7 128 aaKnown RBP2.61□□□□□ -1.99
HMGB3P8-201ENST00000449709 MUSTN1Q8IVN3 82 aa2.61□□□□□ -1.99
HMGB3P8-201ENST00000449709 C11orf45Q8TAV5 145 aa2.61□□□□□ -1.99
HMGB3P8-201ENST00000449709 EEF1AKMT3Q96AZ1 226 aa2.61□□□□□ -1.99
HMGB3P8-201ENST00000449709 IMMP1LQ96LU5 166 aa2.61□□□□□ -1.99
HMGB3P8-201ENST00000449709 TIMM17AQ99595 171 aa2.61□□□□□ -1.99
HMGB3P8-201ENST00000449709 DCTN5Q9BTE1 182 aa2.61□□□□□ -1.99
HMGB3P8-201ENST00000449709 DEFB127Q9H1M4 99 aa2.61□□□□□ -1.99
HMGB3P8-201ENST00000449709 LINC00474Q9P2X8 69 aa2.61□□□□□ -1.99
HMGB3P8-201ENST00000449709 LINC00588Q9Y4M8 146 aa2.61□□□□□ -1.99
HMGB3P8-201ENST00000449709 DSCAML1Q8TD84 2053 aa2.61□□□□□ -1.99
HMGB3P8-201ENST00000449709 NOTCH4Q99466 2003 aa2.6□□□□□ -1.99
HMGB3P8-201ENST00000449709 IGHV1OR15-9A0A0B4J2B8 117 aa2.6□□□□□ -1.99
HMGB3P8-201ENST00000449709 TRBV7-4A0A0J9YYF1 115 aa2.6□□□□□ -1.99
HMGB3P8-201ENST00000449709 TRBV27A0A0K0K1C4 114 aa2.6□□□□□ -1.99
HMGB3P8-201ENST00000449709 H3BTX0 84 aa2.6□□□□□ -1.99
HMGB3P8-201ENST00000449709 SH2D1AO60880 128 aa2.6□□□□□ -1.99
HMGB3P8-201ENST00000449709 RNASE4P34096 147 aaKnown RBP2.6□□□□□ -1.99
HMGB3P8-201ENST00000449709 SUB1P53999 127 aaKnown RBP eCLIP2.6□□□□□ -1.99
HMGB3P8-201ENST00000449709 PDE6HQ13956 83 aa2.6□□□□□ -1.99
HMGB3P8-201ENST00000449709 ATP1A1-AS1Q5TC04 95 aa2.6□□□□□ -1.99
HMGB3P8-201ENST00000449709 UNQ9165/PRO28630Q6UXU0 137 aa2.6□□□□□ -1.99
HMGB3P8-201ENST00000449709 ZNF826PQ6ZT77 177 aa2.6□□□□□ -1.99
HMGB3P8-201ENST00000449709 Q6ZVQ6 151 aa2.6□□□□□ -1.99
HMGB3P8-201ENST00000449709 VKORC1L1Q8N0U8 176 aa2.6□□□□□ -1.99
HMGB3P8-201ENST00000449709 LY6G5BQ8NDX9 201 aa2.6□□□□□ -1.99
HMGB3P8-201ENST00000449709 KLHL30-AS1Q8NEE0 82 aa2.6□□□□□ -1.99
HMGB3P8-201ENST00000449709 NDUFA4L2Q9NRX3 87 aa2.6□□□□□ -1.99
HMGB3P8-201ENST00000449709 ESPL1Q14674 2120 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms