RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 UBE2D2P62837 147 aa14.26□□□□□ -0.13
SDCBP-204ENST00000447182 IGHV4-61A0A0C4DH41 118 aa14.25□□□□□ -0.13
SDCBP-204ENST00000447182 SDHAF1A6NFY7 115 aa14.25□□□□□ -0.13
SDCBP-204ENST00000447182 BLCAPP62952 87 aa14.25□□□□□ -0.13
SDCBP-204ENST00000447182 NDUFS8O00217 210 aa14.24□□□□□ -0.13
SDCBP-204ENST00000447182 RPL39P62891 51 aaKnown RBP14.24□□□□□ -0.13
SDCBP-204ENST00000447182 CFHR3Q02985 330 aa14.24□□□□□ -0.13
SDCBP-204ENST00000447182 ZNF876PQ49A33 203 aa14.24□□□□□ -0.13
SDCBP-204ENST00000447182 PIMREGQ9BSJ6 248 aa14.24□□□□□ -0.13
SDCBP-204ENST00000447182 C19orf84I3L1E1 186 aa14.24□□□□□ -0.13
SDCBP-204ENST00000447182 SMAGPQ0VAQ4 97 aa14.24□□□□□ -0.13
SDCBP-204ENST00000447182 ODF3Q96PU9 254 aa14.24□□□□□ -0.13
SDCBP-204ENST00000447182 APOMO95445 188 aa14.23□□□□□ -0.13
SDCBP-204ENST00000447182 SRD5A1P18405 259 aa14.23□□□□□ -0.13
SDCBP-204ENST00000447182 LYRM7Q5U5X0 104 aa14.23□□□□□ -0.13
SDCBP-204ENST00000447182 Q6ZS46 218 aa14.23□□□□□ -0.13
SDCBP-204ENST00000447182 NDUFA11Q86Y39 141 aa14.23□□□□□ -0.13
SDCBP-204ENST00000447182 C9orf85Q96MD7 179 aa14.23□□□□□ -0.13
SDCBP-204ENST00000447182 C1QTNF4Q9BXJ3 329 aa14.23□□□□□ -0.13
SDCBP-204ENST00000447182 A0A087WWL8 130 aa14.23□□□□□ -0.13
SDCBP-204ENST00000447182 SMCPP49901 116 aaPredicted RBP14.23□□□□□ -0.13
SDCBP-204ENST00000447182 INSL3P51460 131 aa14.23□□□□□ -0.13
SDCBP-204ENST00000447182 EMP1P54849 157 aa14.23□□□□□ -0.13
SDCBP-204ENST00000447182 SLC25A29Q8N8R3 303 aa14.23□□□□□ -0.13
SDCBP-204ENST00000447182 TRAV12-3A0A0B4J271 114 aa14.22□□□□□ -0.13
SDCBP-204ENST00000447182 F5H697 171 aa14.22□□□□□ -0.13
SDCBP-204ENST00000447182 ZNRF2Q8NHG8 242 aa14.22□□□□□ -0.13
SDCBP-204ENST00000447182 IGHV3-30P01768 117 aa14.21□□□□□ -0.13
SDCBP-204ENST00000447182 IGHV3-30-5P0DP03 117 aa14.21□□□□□ -0.13
SDCBP-204ENST00000447182 FOXI1Q12951 378 aa14.21□□□□□ -0.13
SDCBP-204ENST00000447182 ZNF580Q9UK33 172 aa14.21□□□□□ -0.13
SDCBP-204ENST00000447182 SPTAN1Q13813 2472 aaKnown RBP14.21□□□□□ -0.13
SDCBP-204ENST00000447182 IGHV3-16A0A0C4DH30 117 aa14.21□□□□□ -0.13
SDCBP-204ENST00000447182 TSPEAR-AS2P59090 65 aa14.21□□□□□ -0.13
SDCBP-204ENST00000447182 C10orf105Q8TEF2 133 aa14.21□□□□□ -0.13
SDCBP-204ENST00000447182 AMELXQ99217 191 aa14.21□□□□□ -0.13
SDCBP-204ENST00000447182 EDN2P20800 178 aa14.2□□□□□ -0.14
SDCBP-204ENST00000447182 CLEC2AQ6UVW9 174 aa14.2□□□□□ -0.14
SDCBP-204ENST00000447182 NFE4Q86UQ8 179 aa14.2□□□□□ -0.14
SDCBP-204ENST00000447182 LOC107984156A0A0G2JMH3 177 aa14.2□□□□□ -0.14
SDCBP-204ENST00000447182 NSUN5P1Q3KNT7 163 aa14.2□□□□□ -0.14
SDCBP-204ENST00000447182 TMEM170BQ5T4T1 132 aa14.2□□□□□ -0.14
SDCBP-204ENST00000447182 ARL17AQ8IVW1 177 aa14.2□□□□□ -0.14
SDCBP-204ENST00000447182 PSMB2P49721 201 aa14.19□□□□□ -0.14
SDCBP-204ENST00000447182 RHOHQ15669 191 aa14.19□□□□□ -0.14
SDCBP-204ENST00000447182 M0QY20 66 aa14.18□□□□□ -0.14
SDCBP-204ENST00000447182 CIDEAO60543 219 aa14.18□□□□□ -0.14
SDCBP-204ENST00000447182 SYT8Q8NBV8 401 aa14.18□□□□□ -0.14
SDCBP-204ENST00000447182 TRBV20-1A0A075B6N2 111 aa14.18□□□□□ -0.14
SDCBP-204ENST00000447182 J3QQQ9 107 aa14.18□□□□□ -0.14
SDCBP-204ENST00000447182 CFC1BP0CG36 223 aa14.18□□□□□ -0.14
SDCBP-204ENST00000447182 CFC1P0CG37 223 aa14.18□□□□□ -0.14
SDCBP-204ENST00000447182 WFDC12Q8WWY7 111 aa14.18□□□□□ -0.14
SDCBP-204ENST00000447182 DEFB104AQ8WTQ1 72 aa14.17□□□□□ -0.14
SDCBP-204ENST00000447182 LY6DQ14210 128 aa14.17□□□□□ -0.14
SDCBP-204ENST00000447182 FAM74A4Q5TZK3 123 aa14.17□□□□□ -0.14
SDCBP-204ENST00000447182 C10orf126Q8N4M7 172 aa14.17□□□□□ -0.14
SDCBP-204ENST00000447182 A0A0J9YX75 114 aa14.16□□□□□ -0.14
SDCBP-204ENST00000447182 PSMB8P28062 276 aa14.16□□□□□ -0.14
SDCBP-204ENST00000447182 TRPT1Q86TN4 253 aaKnown RBP14.16□□□□□ -0.14
SDCBP-204ENST00000447182 MDFICQ9P1T7 246 aa14.16□□□□□ -0.14
SDCBP-204ENST00000447182 ZNF256Q9Y2P7 627 aaPredicted RBP14.15□□□□□ -0.14
SDCBP-204ENST00000447182 CELSR1Q9NYQ6 3014 aa14.15□□□□□ -0.14
SDCBP-204ENST00000447182 LGALS3P17931 250 aaKnown RBP14.15□□□□□ -0.14
SDCBP-204ENST00000447182 ZNF56Q15929 161 aa14.15□□□□□ -0.14
SDCBP-204ENST00000447182 SBSPONQ8IVN8 264 aa14.15□□□□□ -0.14
SDCBP-204ENST00000447182 Q8N1Y9 231 aa14.15□□□□□ -0.14
SDCBP-204ENST00000447182 TMEM223A0PJW6 202 aa14.14□□□□□ -0.15
SDCBP-204ENST00000447182 LEPROTO15243 131 aa14.14□□□□□ -0.15
SDCBP-204ENST00000447182 TCL1BO95988 128 aa14.14□□□□□ -0.15
SDCBP-204ENST00000447182 MSMBP08118 114 aa14.14□□□□□ -0.15
SDCBP-204ENST00000447182 ZNF688P0C7X2 276 aa14.14□□□□□ -0.15
SDCBP-204ENST00000447182 SNRPD3P62318 126 aaKnown RBP14.14□□□□□ -0.15
SDCBP-204ENST00000447182 SFTA2Q6UW10 78 aa14.14□□□□□ -0.15
SDCBP-204ENST00000447182 IGHV1OR15-1A0A075B7D0 117 aa14.14□□□□□ -0.15
SDCBP-204ENST00000447182 CCL19Q99731 98 aa14.14□□□□□ -0.15
SDCBP-204ENST00000447182 PRO1854Q9UHT4 67 aa14.14□□□□□ -0.15
SDCBP-204ENST00000447182 P0DMU3 169 aa14.13□□□□□ -0.15
SDCBP-204ENST00000447182 FAM231AP0DMU4 169 aa14.13□□□□□ -0.15
SDCBP-204ENST00000447182 FAM231CP0DMU5 169 aa14.13□□□□□ -0.15
SDCBP-204ENST00000447182 TEN1Q86WV5 123 aa14.13□□□□□ -0.15
SDCBP-204ENST00000447182 VPS13CQ709C8 3753 aa14.13□□□□□ -0.15
SDCBP-204ENST00000447182 K7EQG2 157 aa14.12□□□□□ -0.15
SDCBP-204ENST00000447182 C20orf203Q8NBC4 194 aa14.12□□□□□ -0.15
SDCBP-204ENST00000447182 ZNF418Q8TF45 676 aaPredicted RBP14.12□□□□□ -0.15
SDCBP-204ENST00000447182 CDIP1Q9H305 208 aa14.12□□□□□ -0.15
SDCBP-204ENST00000447182 TRAV12-2A0A075B6T6 113 aa14.12□□□□□ -0.15
SDCBP-204ENST00000447182 RNF152Q8N8N0 203 aa14.12□□□□□ -0.15
SDCBP-204ENST00000447182 PPDPFLQ8WWR9 84 aa14.12□□□□□ -0.15
SDCBP-204ENST00000447182 IGHV4-30-2A0A087WSY4 118 aa14.11□□□□□ -0.15
SDCBP-204ENST00000447182 A0A1B0GV72 72 aa14.11□□□□□ -0.15
SDCBP-204ENST00000447182 TMEM89A2RUT3 159 aa14.11□□□□□ -0.15
SDCBP-204ENST00000447182 I3L3M4 83 aa14.11□□□□□ -0.15
SDCBP-204ENST00000447182 GNLYP22749 145 aa14.11□□□□□ -0.15
SDCBP-204ENST00000447182 TCTEX1D4Q5JR98 221 aa14.11□□□□□ -0.15
SDCBP-204ENST00000447182 OPRPNQ99935 248 aaPredicted RBP14.11□□□□□ -0.15
SDCBP-204ENST00000447182 TMEM95Q3KNT9 176 aa14.1□□□□□ -0.15
SDCBP-204ENST00000447182 VCX2Q9H322 139 aa14.1□□□□□ -0.15
SDCBP-204ENST00000447182 RHODO00212 210 aa14.09□□□□□ -0.15
SDCBP-204ENST00000447182 ZNF22P17026 224 aaPredicted RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms