RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 COL4A5P29400 1685 aa2.48□□□□□ -2.01
TM9SF3-202ENST00000443638 QRICH2Q9H0J4 1663 aa2.48□□□□□ -2.01
TM9SF3-202ENST00000443638 APOC4-APOC2K7ER74 178 aa2.48□□□□□ -2.01
TM9SF3-202ENST00000443638 PITX3O75364 302 aa2.48□□□□□ -2.01
TM9SF3-202ENST00000443638 APOC2P02655 101 aa2.48□□□□□ -2.01
TM9SF3-202ENST00000443638 SPINK8P0C7L1 97 aa2.48□□□□□ -2.01
TM9SF3-202ENST00000443638 IFITM1P13164 125 aa2.48□□□□□ -2.01
TM9SF3-202ENST00000443638 KRTAP10-1P60331 282 aa2.48□□□□□ -2.01
TM9SF3-202ENST00000443638 C9orf153Q5TBE3 101 aa2.48□□□□□ -2.01
TM9SF3-202ENST00000443638 Q6ZRN7 208 aaPredicted RBP2.48□□□□□ -2.01
TM9SF3-202ENST00000443638 SVBPQ8N300 66 aa2.48□□□□□ -2.01
TM9SF3-202ENST00000443638 C5orf17Q8NAS9 161 aa2.48□□□□□ -2.01
TM9SF3-202ENST00000443638 CST11Q9H112 138 aa2.48□□□□□ -2.01
TM9SF3-202ENST00000443638 CASKIN1Q8WXD9 1431 aa2.48□□□□□ -2.01
TM9SF3-202ENST00000443638 PARP4Q9UKK3 1724 aaKnown RBP2.48□□□□□ -2.01
TM9SF3-202ENST00000443638 TRIOBPQ9H2D6 2365 aa2.47□□□□□ -2.01
TM9SF3-202ENST00000443638 ZFC3H1O60293 1989 aaKnown RBP2.47□□□□□ -2.01
TM9SF3-202ENST00000443638 TANC2Q9HCD6 1990 aa2.47□□□□□ -2.01
TM9SF3-202ENST00000443638 LRRC37A3O60309 1634 aa2.47□□□□□ -2.01
TM9SF3-202ENST00000443638 C3orf85A0A1B0GTC6 90 aa2.47□□□□□ -2.01
TM9SF3-202ENST00000443638 MCRIP1C9JLW8 97 aa2.47□□□□□ -2.01
TM9SF3-202ENST00000443638 CXCL8P10145 99 aa2.47□□□□□ -2.01
TM9SF3-202ENST00000443638 MIC13Q5XKP0 118 aa2.47□□□□□ -2.01
TM9SF3-202ENST00000443638 FP248Q71RG6 208 aaPredicted RBP2.47□□□□□ -2.01
TM9SF3-202ENST00000443638 TTC9CQ8N5M4 171 aa2.47□□□□□ -2.01
TM9SF3-202ENST00000443638 PLPP5Q8NEB5 264 aa2.47□□□□□ -2.01
TM9SF3-202ENST00000443638 ATP6V0E2Q8NHE4 81 aa2.47□□□□□ -2.01
TM9SF3-202ENST00000443638 Q9H521 79 aa2.47□□□□□ -2.01
TM9SF3-202ENST00000443638 PKD1L3Q7Z443 1732 aa2.47□□□□□ -2.01
TM9SF3-202ENST00000443638 TNRC6CQ9HCJ0 1690 aaKnown RBP2.47□□□□□ -2.01
TM9SF3-202ENST00000443638 RTTNQ86VV8 2226 aa2.46□□□□□ -2.01
TM9SF3-202ENST00000443638 MPDZO75970 2070 aa2.46□□□□□ -2.01
TM9SF3-202ENST00000443638 NRXN1Q9ULB1 1477 aa2.46□□□□□ -2.02
TM9SF3-202ENST00000443638 CDC42BPGQ6DT37 1551 aa2.46□□□□□ -2.02
TM9SF3-202ENST00000443638 IGHV1-24A0A0C4DH33 117 aa2.46□□□□□ -2.02
TM9SF3-202ENST00000443638 MPC2O95563 127 aa2.46□□□□□ -2.02
TM9SF3-202ENST00000443638 RNASE3P12724 160 aaKnown RBP2.46□□□□□ -2.02
TM9SF3-202ENST00000443638 BRS3P32247 399 aa2.46□□□□□ -2.02
TM9SF3-202ENST00000443638 KRTAP10-10P60014 251 aa2.46□□□□□ -2.02
TM9SF3-202ENST00000443638 Q6AWC8 147 aa2.46□□□□□ -2.02
TM9SF3-202ENST00000443638 C2orf82Q6UX34 121 aa2.46□□□□□ -2.02
TM9SF3-202ENST00000443638 ATP11AUNQ6ZP68 121 aa2.46□□□□□ -2.02
TM9SF3-202ENST00000443638 FOXI2Q6ZQN5 318 aa2.46□□□□□ -2.02
TM9SF3-202ENST00000443638 LINC00526Q96FQ7 95 aa2.46□□□□□ -2.02
TM9SF3-202ENST00000443638 NOP16Q9Y3C1 178 aaKnown RBP2.46□□□□□ -2.02
TM9SF3-202ENST00000443638 V9GYS6 101 aa2.46□□□□□ -2.02
TM9SF3-202ENST00000443638 BTAF1O14981 1849 aa2.46□□□□□ -2.02
TM9SF3-202ENST00000443638 CACNA1AO00555 2505 aa2.46□□□□□ -2.02
TM9SF3-202ENST00000443638 KIAA1551Q9HCM1 1747 aa2.45□□□□□ -2.02
TM9SF3-202ENST00000443638 CRYBG1Q9Y4K1 1723 aa2.45□□□□□ -2.02
TM9SF3-202ENST00000443638 KIF1AQ12756 1690 aa2.45□□□□□ -2.02
TM9SF3-202ENST00000443638 ALS2Q96Q42 1657 aa2.45□□□□□ -2.02
TM9SF3-202ENST00000443638 MYH1P12882 1939 aa2.45□□□□□ -2.02
TM9SF3-202ENST00000443638 TRAV14DV4A0A0A6YYC5 116 aa2.45□□□□□ -2.02
TM9SF3-202ENST00000443638 J3QLW9 94 aa2.45□□□□□ -2.02
TM9SF3-202ENST00000443638 BRD3OSQ6XYD6 125 aa2.45□□□□□ -2.02
TM9SF3-202ENST00000443638 ZCCHC23Q6ZST2 131 aa2.45□□□□□ -2.02
TM9SF3-202ENST00000443638 C9orf62Q8N4C0 152 aa2.45□□□□□ -2.02
TM9SF3-202ENST00000443638 VSTM2AQ8TAG5 236 aa2.45□□□□□ -2.02
TM9SF3-202ENST00000443638 LCE3DQ9BYE3 92 aa2.45□□□□□ -2.02
TM9SF3-202ENST00000443638 CITO14578 2027 aa2.45□□□□□ -2.02
TM9SF3-202ENST00000443638 FN1P02751 2386 aaKnown RBP2.45□□□□□ -2.02
TM9SF3-202ENST00000443638 QSER1Q2KHR3 1735 aa2.45□□□□□ -2.02
TM9SF3-202ENST00000443638 MKI67P46013 3256 aaKnown RBP2.44□□□□□ -2.02
TM9SF3-202ENST00000443638 NSD3Q9BZ95 1437 aa2.44□□□□□ -2.02
TM9SF3-202ENST00000443638 PLXNA3P51805 1871 aa2.44□□□□□ -2.02
TM9SF3-202ENST00000443638 BRWD1Q9NSI6 2320 aa2.44□□□□□ -2.02
TM9SF3-202ENST00000443638 EDF1O60869 148 aaKnown RBP2.44□□□□□ -2.02
TM9SF3-202ENST00000443638 MIR22HGQ0VDD5 57 aa2.44□□□□□ -2.02
TM9SF3-202ENST00000443638 C10orf55Q5SWW7 151 aa2.44□□□□□ -2.02
TM9SF3-202ENST00000443638 OR2T2Q6IF00 324 aa2.44□□□□□ -2.02
TM9SF3-202ENST00000443638 LSM10Q969L4 123 aaKnown RBP2.44□□□□□ -2.02
TM9SF3-202ENST00000443638 AQP10Q96PS8 301 aa2.44□□□□□ -2.02
TM9SF3-202ENST00000443638 SMIM7Q9BQ49 75 aa2.44□□□□□ -2.02
TM9SF3-202ENST00000443638 NHSQ6T4R5 1651 aa2.44□□□□□ -2.02
TM9SF3-202ENST00000443638 LMO7Q8WWI1 1683 aa2.44□□□□□ -2.02
TM9SF3-202ENST00000443638 LOC107984156A0A0G2JMH3 177 aa2.43□□□□□ -2.02
TM9SF3-202ENST00000443638 A0A1W2PRS3 328 aa2.43□□□□□ -2.02
TM9SF3-202ENST00000443638 TCRBV3S1A0A5B6 114 aa2.43□□□□□ -2.02
TM9SF3-202ENST00000443638 FREM3P0C091 2139 aa2.43□□□□□ -2.02
TM9SF3-202ENST00000443638 Q6ZS92 163 aa2.43□□□□□ -2.02
TM9SF3-202ENST00000443638 COA5Q86WW8 74 aa2.43□□□□□ -2.02
TM9SF3-202ENST00000443638 ARL17AQ8IVW1 177 aa2.43□□□□□ -2.02
TM9SF3-202ENST00000443638 C4orf33Q8N1A6 199 aa2.43□□□□□ -2.02
TM9SF3-202ENST00000443638 SCP2D1Q9UJQ7 156 aa2.43□□□□□ -2.02
TM9SF3-202ENST00000443638 UNC80Q8N2C7 3258 aa2.43□□□□□ -2.02
TM9SF3-202ENST00000443638 KNDC1Q76NI1 1749 aa2.42□□□□□ -2.02
TM9SF3-202ENST00000443638 ANKRD26Q9UPS8 1709 aa2.42□□□□□ -2.02
TM9SF3-202ENST00000443638 ALPK3Q96L96 1907 aa2.42□□□□□ -2.02
TM9SF3-202ENST00000443638 MDC1Q14676 2089 aaKnown RBP2.42□□□□□ -2.02
TM9SF3-202ENST00000443638 LAMB4A4D0S4 1761 aa2.42□□□□□ -2.02
TM9SF3-202ENST00000443638 IL5P05113 134 aa2.42□□□□□ -2.02
TM9SF3-202ENST00000443638 GYPBP06028 91 aa2.42□□□□□ -2.02
TM9SF3-202ENST00000443638 IGKV4-1P06312 121 aa2.42□□□□□ -2.02
TM9SF3-202ENST00000443638 NPC2P61916 151 aa2.42□□□□□ -2.02
TM9SF3-202ENST00000443638 CASC2Q6XLA1 102 aa2.42□□□□□ -2.02
TM9SF3-202ENST00000443638 DEFB123Q8N688 67 aa2.42□□□□□ -2.02
TM9SF3-202ENST00000443638 C4orf3Q8WVX3 66 aa2.42□□□□□ -2.02
TM9SF3-202ENST00000443638 PATE1Q8WXA2 126 aa2.42□□□□□ -2.02
TM9SF3-202ENST00000443638 SPTSSAQ969W0 71 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 228 ms