RNA–Protein interactions for RNA: ENST00000440289.6

PTPRJ-202, Transcript of protein tyrosine phosphatase, receptor type J, humanhuman

TSL 1 (best) BASIC

Gene PTPRJ, Length 3,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRJ-202ENST00000440289 NF1P21359 2839 aa13.8□□□□□ -0.2
PTPRJ-202ENST00000440289 ZNF462Q96JM2 2506 aa13.79□□□□□ -0.2
PTPRJ-202ENST00000440289 C19orf84I3L1E1 186 aa13.79□□□□□ -0.2
PTPRJ-202ENST00000440289 Q1RN00 199 aa13.79□□□□□ -0.2
PTPRJ-202ENST00000440289 PSMG4Q5JS54 123 aa13.79□□□□□ -0.2
PTPRJ-202ENST00000440289 MOB4Q9Y3A3 225 aa13.79□□□□□ -0.2
PTPRJ-202ENST00000440289 EPG5Q9HCE0 2579 aa13.79□□□□□ -0.2
PTPRJ-202ENST00000440289 PRM2P04554 102 aa13.79□□□□□ -0.2
PTPRJ-202ENST00000440289 LMO4P61968 165 aa13.79□□□□□ -0.2
PTPRJ-202ENST00000440289 GPHB5Q86YW7 130 aa13.78□□□□□ -0.2
PTPRJ-202ENST00000440289 MRAP2Q96G30 205 aa13.78□□□□□ -0.2
PTPRJ-202ENST00000440289 AJUBAQ96IF1 538 aa13.78□□□□□ -0.2
PTPRJ-202ENST00000440289 NIPBLQ6KC79 2804 aaeCLIP13.78□□□□□ -0.2
PTPRJ-202ENST00000440289 NDUFS8O00217 210 aa13.78□□□□□ -0.2
PTPRJ-202ENST00000440289 SYT8Q8NBV8 401 aa13.78□□□□□ -0.2
PTPRJ-202ENST00000440289 NEXN-AS1Q8NBZ9 246 aa13.77□□□□□ -0.2
PTPRJ-202ENST00000440289 TRAV2A0A0B4J234 112 aa13.77□□□□□ -0.21
PTPRJ-202ENST00000440289 SDHAF1A6NFY7 115 aa13.77□□□□□ -0.21
PTPRJ-202ENST00000440289 RNASE3P12724 160 aaKnown RBP13.77□□□□□ -0.21
PTPRJ-202ENST00000440289 SPINK13Q1W4C9 94 aa13.77□□□□□ -0.21
PTPRJ-202ENST00000440289 NRGNQ92686 78 aa13.77□□□□□ -0.21
PTPRJ-202ENST00000440289 KIR2DL4Q99706 377 aa13.77□□□□□ -0.21
PTPRJ-202ENST00000440289 F8W1H4 67 aa13.76□□□□□ -0.21
PTPRJ-202ENST00000440289 CLEC2AQ6UVW9 174 aa13.76□□□□□ -0.21
PTPRJ-202ENST00000440289 TOMM6Q96B49 74 aa13.76□□□□□ -0.21
PTPRJ-202ENST00000440289 MUC4Q99102 2169 aa13.76□□□□□ -0.21
PTPRJ-202ENST00000440289 TRBV7-3A0A075B6L6 115 aa13.76□□□□□ -0.21
PTPRJ-202ENST00000440289 IGHV4-61A0A0C4DH41 118 aa13.76□□□□□ -0.21
PTPRJ-202ENST00000440289 KNCNA6PVL3 124 aa13.75□□□□□ -0.21
PTPRJ-202ENST00000440289 MDFICQ9P1T7 246 aa13.75□□□□□ -0.21
PTPRJ-202ENST00000440289 SUMO4Q6EEV6 95 aa13.75□□□□□ -0.21
PTPRJ-202ENST00000440289 C1orf122Q6ZSJ8 110 aa13.75□□□□□ -0.21
PTPRJ-202ENST00000440289 PRSS2P07478 247 aa13.75□□□□□ -0.21
PTPRJ-202ENST00000440289 MORN3Q6PF18 240 aaPredicted RBP13.75□□□□□ -0.21
PTPRJ-202ENST00000440289 NAV2Q8IVL1 2488 aa13.74□□□□□ -0.21
PTPRJ-202ENST00000440289 JMJD1CQ15652 2540 aa13.74□□□□□ -0.21
PTPRJ-202ENST00000440289 SRSF2Q01130 221 aaKnown RBP13.74□□□□□ -0.21
PTPRJ-202ENST00000440289 PSMG3-AS1Q96PY0 264 aa13.74□□□□□ -0.21
PTPRJ-202ENST00000440289 FBXL19-AS1Q494R0 122 aa13.73□□□□□ -0.21
PTPRJ-202ENST00000440289 ZNF580Q9UK33 172 aa13.73□□□□□ -0.21
PTPRJ-202ENST00000440289 OVOL1O14753 267 aa13.73□□□□□ -0.21
PTPRJ-202ENST00000440289 HERVK_113P61574 105 aa13.73□□□□□ -0.21
PTPRJ-202ENST00000440289 IGHV4-39P01824 125 aa13.73□□□□□ -0.21
PTPRJ-202ENST00000440289 LGALS3P17931 250 aaKnown RBP13.72□□□□□ -0.21
PTPRJ-202ENST00000440289 GNLYP22749 145 aa13.72□□□□□ -0.21
PTPRJ-202ENST00000440289 TSPEAR-AS2P59090 65 aa13.72□□□□□ -0.21
PTPRJ-202ENST00000440289 TEX15Q9BXT5 2789 aa13.72□□□□□ -0.21
PTPRJ-202ENST00000440289 TMEM238LA0A1B0GVL6 79 aa13.72□□□□□ -0.21
PTPRJ-202ENST00000440289 A6NJY4 79 aa13.72□□□□□ -0.21
PTPRJ-202ENST00000440289 TSPAN13O95857 204 aa13.72□□□□□ -0.21
PTPRJ-202ENST00000440289 CEMP1Q6PRD7 247 aaPredicted RBP13.72□□□□□ -0.21
PTPRJ-202ENST00000440289 DLX4Q92988 240 aaPredicted RBP13.72□□□□□ -0.21
PTPRJ-202ENST00000440289 ANKRD17O75179 2603 aaKnown RBP13.71□□□□□ -0.21
PTPRJ-202ENST00000440289 IGHV1-69DA0A0B4J2H0 117 aa13.71□□□□□ -0.22
PTPRJ-202ENST00000440289 IGHV1-69P01742 117 aa13.71□□□□□ -0.22
PTPRJ-202ENST00000440289 P0DMU3 169 aa13.71□□□□□ -0.22
PTPRJ-202ENST00000440289 FAM231AP0DMU4 169 aa13.71□□□□□ -0.22
PTPRJ-202ENST00000440289 FAM231CP0DMU5 169 aa13.71□□□□□ -0.22
PTPRJ-202ENST00000440289 ITLN2Q8WWU7 325 aaPredicted RBP13.71□□□□□ -0.22
PTPRJ-202ENST00000440289 TMEM190Q8WZ59 177 aa13.71□□□□□ -0.22
PTPRJ-202ENST00000440289 KHDC1LQ5JSQ8 128 aa13.7□□□□□ -0.22
PTPRJ-202ENST00000440289 SPXQ9BT56 116 aa13.7□□□□□ -0.22
PTPRJ-202ENST00000440289 A0A0U1RRA0 63 aa13.7□□□□□ -0.22
PTPRJ-202ENST00000440289 ATP5J2P56134 94 aa13.7□□□□□ -0.22
PTPRJ-202ENST00000440289 TSHBP01222 138 aa13.69□□□□□ -0.22
PTPRJ-202ENST00000440289 CRYGDP07320 174 aa13.69□□□□□ -0.22
PTPRJ-202ENST00000440289 PIFOQ8TCI5 191 aa13.69□□□□□ -0.22
PTPRJ-202ENST00000440289 FAM223BA6NKX1 122 aa13.68□□□□□ -0.22
PTPRJ-202ENST00000440289 NDUFA4O00483 81 aa13.68□□□□□ -0.22
PTPRJ-202ENST00000440289 NFE4Q86UQ8 179 aa13.68□□□□□ -0.22
PTPRJ-202ENST00000440289 FAM223AQ8IWN6 122 aa13.68□□□□□ -0.22
PTPRJ-202ENST00000440289 ZNRF2Q8NHG8 242 aa13.68□□□□□ -0.22
PTPRJ-202ENST00000440289 DAZ1Q9NQZ3 744 aaKnown RBP13.68□□□□□ -0.22
PTPRJ-202ENST00000440289 DOPEY1Q5JWR5 2465 aa13.68□□□□□ -0.22
PTPRJ-202ENST00000440289 TRAV12-1A0A0B4J245 112 aa13.68□□□□□ -0.22
PTPRJ-202ENST00000440289 SYNJ2BPP57105 145 aa13.68□□□□□ -0.22
PTPRJ-202ENST00000440289 PMVKQ15126 192 aa13.68□□□□□ -0.22
PTPRJ-202ENST00000440289 TRPT1Q86TN4 253 aaKnown RBP13.68□□□□□ -0.22
PTPRJ-202ENST00000440289 U3KQE9 123 aa13.68□□□□□ -0.22
PTPRJ-202ENST00000440289 ZNF469Q96JG9 3925 aaPredicted RBP13.68□□□□□ -0.22
PTPRJ-202ENST00000440289 UCNP55089 124 aa13.67□□□□□ -0.22
PTPRJ-202ENST00000440289 CKS1BP61024 79 aa13.67□□□□□ -0.22
PTPRJ-202ENST00000440289 ZNF876PQ49A33 203 aa13.67□□□□□ -0.22
PTPRJ-202ENST00000440289 LINC01546A6NGU7 62 aa13.67□□□□□ -0.22
PTPRJ-202ENST00000440289 TCL1BO95988 128 aa13.67□□□□□ -0.22
PTPRJ-202ENST00000440289 PROK1P58294 105 aa13.67□□□□□ -0.22
PTPRJ-202ENST00000440289 TAL2Q16559 108 aa13.67□□□□□ -0.22
PTPRJ-202ENST00000440289 SPINK8P0C7L1 97 aa13.67□□□□□ -0.22
PTPRJ-202ENST00000440289 DUX3Q96PT4 197 aa13.67□□□□□ -0.22
PTPRJ-202ENST00000440289 A0A0J9YXV3 536 aa13.66□□□□□ -0.22
PTPRJ-202ENST00000440289 MT-ATP8P03928 68 aa13.66□□□□□ -0.22
PTPRJ-202ENST00000440289 Q8N1Y9 231 aa13.66□□□□□ -0.22
PTPRJ-202ENST00000440289 MRPL53Q96EL3 112 aaKnown RBP13.66□□□□□ -0.22
PTPRJ-202ENST00000440289 RNF223E7ERA6 249 aa13.66□□□□□ -0.22
PTPRJ-202ENST00000440289 CIDEAO60543 219 aa13.66□□□□□ -0.22
PTPRJ-202ENST00000440289 SMCPP49901 116 aaPredicted RBP13.66□□□□□ -0.22
PTPRJ-202ENST00000440289 MTORP42345 2549 aa13.65□□□□□ -0.22
PTPRJ-202ENST00000440289 A8MZ25 164 aa13.65□□□□□ -0.22
PTPRJ-202ENST00000440289 C9JAW5 83 aa13.65□□□□□ -0.22
PTPRJ-202ENST00000440289 VCYO14598 125 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms