RNA–Protein interactions for RNA: ENST00000439029.5

SMPD4-208, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-208ENST00000439029 SPCS2Q15005 226 aa5.92□□□□□ -1.46
SMPD4-208ENST00000439029 NDFIP1Q9BT67 221 aa5.92□□□□□ -1.46
SMPD4-208ENST00000439029 RHODO00212 210 aa5.91□□□□□ -1.46
SMPD4-208ENST00000439029 S100A11P31949 105 aa5.91□□□□□ -1.46
SMPD4-208ENST00000439029 RPS10P46783 165 aaKnown RBP5.91□□□□□ -1.46
SMPD4-208ENST00000439029 TMEM252Q8N6L7 170 aa5.91□□□□□ -1.46
SMPD4-208ENST00000439029 C15orf56Q8N910 161 aa5.91□□□□□ -1.46
SMPD4-208ENST00000439029 INO80EQ8NBZ0 244 aaPredicted RBP5.91□□□□□ -1.46
SMPD4-208ENST00000439029 TRIM63Q969Q1 353 aa5.91□□□□□ -1.46
SMPD4-208ENST00000439029 C11orf1Q9H5F2 150 aa5.91□□□□□ -1.46
SMPD4-208ENST00000439029 MBD2Q9UBB5 411 aa5.91□□□□□ -1.46
SMPD4-208ENST00000439029 MUC17Q685J3 4493 aa5.9□□□□□ -1.46
SMPD4-208ENST00000439029 PYDC2Q56P42 97 aa5.9□□□□□ -1.46
SMPD4-208ENST00000439029 NTM-AS1Q6ZSK4 140 aa5.9□□□□□ -1.46
SMPD4-208ENST00000439029 OR5AC2Q9NZP5 309 aa5.9□□□□□ -1.46
SMPD4-208ENST00000439029 TRBV10-1A0A0K0K1A3 114 aa5.89□□□□□ -1.47
SMPD4-208ENST00000439029 GRIFINA4D1Z8 144 aa5.89□□□□□ -1.47
SMPD4-208ENST00000439029 M0R381 172 aa5.89□□□□□ -1.47
SMPD4-208ENST00000439029 TSPAN13O95857 204 aa5.89□□□□□ -1.47
SMPD4-208ENST00000439029 AP3S2P59780 193 aa5.89□□□□□ -1.47
SMPD4-208ENST00000439029 HBG1P69891 147 aa5.89□□□□□ -1.47
SMPD4-208ENST00000439029 HBG2P69892 147 aa5.89□□□□□ -1.47
SMPD4-208ENST00000439029 FAM74A1Q5RGS3 127 aa5.89□□□□□ -1.47
SMPD4-208ENST00000439029 PRNTQ86SH4 94 aa5.89□□□□□ -1.47
SMPD4-208ENST00000439029 STX12Q86Y82 276 aa5.89□□□□□ -1.47
SMPD4-208ENST00000439029 NEXN-AS1Q8NBZ9 246 aa5.89□□□□□ -1.47
SMPD4-208ENST00000439029 OR11H4Q8NGC9 324 aa5.89□□□□□ -1.47
SMPD4-208ENST00000439029 LYRM2Q9NU23 88 aaPredicted RBP5.89□□□□□ -1.47
SMPD4-208ENST00000439029 PSG8Q9UQ74 426 aa5.89□□□□□ -1.47
SMPD4-208ENST00000439029 GAGE12HA6NDE8 117 aa5.88□□□□□ -1.47
SMPD4-208ENST00000439029 ATP6V1G2O95670 118 aa5.88□□□□□ -1.47
SMPD4-208ENST00000439029 ARMS2P0C7Q2 107 aa5.88□□□□□ -1.47
SMPD4-208ENST00000439029 PKIAP61925 76 aa5.88□□□□□ -1.47
SMPD4-208ENST00000439029 NHLH2Q02577 135 aa5.88□□□□□ -1.47
SMPD4-208ENST00000439029 SMUG1Q53HV7 270 aa5.88□□□□□ -1.47
SMPD4-208ENST00000439029 PIK3CD-AS1Q5SR53 167 aa5.88□□□□□ -1.47
SMPD4-208ENST00000439029 SFRP2Q96HF1 295 aa5.88□□□□□ -1.47
SMPD4-208ENST00000439029 M0R036 132 aa5.87□□□□□ -1.47
SMPD4-208ENST00000439029 NDUFB6O95139 128 aa5.87□□□□□ -1.47
SMPD4-208ENST00000439029 MT-ND6P03923 174 aa5.87□□□□□ -1.47
SMPD4-208ENST00000439029 PVALBP20472 110 aaPredicted RBP5.87□□□□□ -1.47
SMPD4-208ENST00000439029 ATP6V1FQ16864 119 aa5.87□□□□□ -1.47
SMPD4-208ENST00000439029 ZFP69Q49AA0 526 aa5.87□□□□□ -1.47
SMPD4-208ENST00000439029 KHDC3LQ587J8 217 aa5.87□□□□□ -1.47
SMPD4-208ENST00000439029 C1orf137Q5JT78 98 aa5.87□□□□□ -1.47
SMPD4-208ENST00000439029 C20orf203Q8NBC4 194 aa5.87□□□□□ -1.47
SMPD4-208ENST00000439029 OR10G8Q8NGN5 311 aa5.87□□□□□ -1.47
SMPD4-208ENST00000439029 DERL1Q9BUN8 251 aa5.87□□□□□ -1.47
SMPD4-208ENST00000439029 IL36BQ9NZH7 164 aa5.87□□□□□ -1.47
SMPD4-208ENST00000439029 IGLV4-60A0A075B6I1 120 aa5.86□□□□□ -1.47
SMPD4-208ENST00000439029 IGKV3OR2-268A0A0C4DH90 116 aa5.86□□□□□ -1.47
SMPD4-208ENST00000439029 HMGB3O15347 200 aaKnown RBP5.86□□□□□ -1.47
SMPD4-208ENST00000439029 ZNF56Q15929 161 aa5.86□□□□□ -1.47
SMPD4-208ENST00000439029 OR5C1Q8NGR4 320 aa5.86□□□□□ -1.47
SMPD4-208ENST00000439029 SUN5Q8TC36 379 aa5.86□□□□□ -1.47
SMPD4-208ENST00000439029 MITD1Q8WV92 249 aa5.86□□□□□ -1.47
SMPD4-208ENST00000439029 LINC00526Q96FQ7 95 aa5.86□□□□□ -1.47
SMPD4-208ENST00000439029 TMSB15BA0A087X1C1 80 aa5.85□□□□□ -1.47
SMPD4-208ENST00000439029 TRAV8-4A0A0B4J246 113 aa5.85□□□□□ -1.47
SMPD4-208ENST00000439029 B4DEV8 164 aa5.85□□□□□ -1.47
SMPD4-208ENST00000439029 P01737 135 aa5.85□□□□□ -1.47
SMPD4-208ENST00000439029 TCRAP04437 139 aa5.85□□□□□ -1.47
SMPD4-208ENST00000439029 DEFA3P59666 94 aa5.85□□□□□ -1.47
SMPD4-208ENST00000439029 FLI1Q01543 452 aaPredicted RBP5.85□□□□□ -1.47
SMPD4-208ENST00000439029 WDR61Q9GZS3 305 aaKnown RBP5.85□□□□□ -1.47
SMPD4-208ENST00000439029 PHLDA3Q9Y5J5 127 aa5.85□□□□□ -1.47
SMPD4-208ENST00000439029 TRBV25-1A0A075B6N4 114 aa5.84□□□□□ -1.47
SMPD4-208ENST00000439029 TRBV6-1A0A0K0K1D8 114 aa5.84□□□□□ -1.47
SMPD4-208ENST00000439029 A0A1W2PNN7 141 aa5.84□□□□□ -1.47
SMPD4-208ENST00000439029 SULT1A2P50226 295 aa5.84□□□□□ -1.47
SMPD4-208ENST00000439029 TAS2R45P59539 299 aa5.84□□□□□ -1.47
SMPD4-208ENST00000439029 SRSF3P84103 164 aaKnown RBP5.84□□□□□ -1.47
SMPD4-208ENST00000439029 RAB32Q13637 225 aa5.84□□□□□ -1.47
SMPD4-208ENST00000439029 CFAP161Q6P656 301 aa5.84□□□□□ -1.47
SMPD4-208ENST00000439029 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.84□□□□□ -1.47
SMPD4-208ENST00000439029 FER1L6-AS1Q8NA97 138 aa5.84□□□□□ -1.47
SMPD4-208ENST00000439029 DIRC1Q969H9 104 aa5.84□□□□□ -1.47
SMPD4-208ENST00000439029 LINC00474Q9P2X8 69 aa5.84□□□□□ -1.47
SMPD4-208ENST00000439029 IGLV1-50A0A075B6I6 118 aa5.83□□□□□ -1.48
SMPD4-208ENST00000439029 TRAV34A0A0B4J273 112 aa5.83□□□□□ -1.48
SMPD4-208ENST00000439029 GZMBP10144 247 aa5.83□□□□□ -1.48
SMPD4-208ENST00000439029 TPT1P13693 172 aaKnown RBP5.83□□□□□ -1.48
SMPD4-208ENST00000439029 UBE2D1P51668 147 aa5.83□□□□□ -1.48
SMPD4-208ENST00000439029 RAB2AP61019 212 aa5.83□□□□□ -1.48
SMPD4-208ENST00000439029 CYCSP99999 105 aaKnown RBP5.83□□□□□ -1.48
SMPD4-208ENST00000439029 GAGE2BQ13066 116 aa5.83□□□□□ -1.48
SMPD4-208ENST00000439029 ARL6IP6Q8N6S5 226 aa5.83□□□□□ -1.48
SMPD4-208ENST00000439029 KCNIP2Q9NS61 270 aa5.83□□□□□ -1.48
SMPD4-208ENST00000439029 V9GYH0 126 aa5.83□□□□□ -1.48
SMPD4-208ENST00000439029 IGHV1-24A0A0C4DH33 117 aa5.82□□□□□ -1.48
SMPD4-208ENST00000439029 FABP5P3A8MUU1 101 aa5.82□□□□□ -1.48
SMPD4-208ENST00000439029 KRBOX1C9JBD0 128 aa5.82□□□□□ -1.48
SMPD4-208ENST00000439029 C17orf112F2Z3M2 114 aa5.82□□□□□ -1.48
SMPD4-208ENST00000439029 F5H697 171 aa5.82□□□□□ -1.48
SMPD4-208ENST00000439029 H3BMQ9 156 aa5.82□□□□□ -1.48
SMPD4-208ENST00000439029 RAB4BP61018 213 aa5.82□□□□□ -1.48
SMPD4-208ENST00000439029 PRR27Q6MZM9 219 aa5.82□□□□□ -1.48
SMPD4-208ENST00000439029 PHF5AQ7RTV0 110 aaKnown RBP5.82□□□□□ -1.48
SMPD4-208ENST00000439029 SDHCQ99643 169 aaPredicted RBP5.82□□□□□ -1.48
SMPD4-208ENST00000439029 TRAV1-1A0A0B4J248 108 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms