RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 ZC2HC1BQ5TFG8 222 aa8.61□□□□□ -1.03
UBR4-207ENST00000425413 KRTAP1-3Q8IUG1 177 aa8.61□□□□□ -1.03
UBR4-207ENST00000425413 Q8N1Y9 231 aa8.61□□□□□ -1.03
UBR4-207ENST00000425413 K7EP13 123 aa8.6□□□□□ -1.03
UBR4-207ENST00000425413 IGKCP01834 107 aa8.6□□□□□ -1.03
UBR4-207ENST00000425413 GCSHP23434 173 aa8.6□□□□□ -1.03
UBR4-207ENST00000425413 DEFB131AP59861 70 aa8.6□□□□□ -1.03
UBR4-207ENST00000425413 SEC11AP67812 179 aa8.6□□□□□ -1.03
UBR4-207ENST00000425413 A6NDN8 102 aa8.6□□□□□ -1.03
UBR4-207ENST00000425413 GAGE10A6NGK3 116 aa8.6□□□□□ -1.03
UBR4-207ENST00000425413 APRG1Q8IVJ8 170 aa8.6□□□□□ -1.03
UBR4-207ENST00000425413 SCGB3A1Q96QR1 104 aa8.6□□□□□ -1.03
UBR4-207ENST00000425413 LINC01546A6NGU7 62 aa8.59□□□□□ -1.03
UBR4-207ENST00000425413 RBX1P62877 108 aa8.59□□□□□ -1.03
UBR4-207ENST00000425413 HSD52Q0P140 79 aa8.59□□□□□ -1.03
UBR4-207ENST00000425413 HHLA3Q9XRX5 114 aa8.59□□□□□ -1.03
UBR4-207ENST00000425413 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.59□□□□□ -1.03
UBR4-207ENST00000425413 K7EMI3 77 aa8.59□□□□□ -1.03
UBR4-207ENST00000425413 ATP5LO75964 103 aa8.59□□□□□ -1.03
UBR4-207ENST00000425413 DPM2O94777 84 aa8.59□□□□□ -1.03
UBR4-207ENST00000425413 KLHL30-AS1Q8NEE0 82 aa8.59□□□□□ -1.03
UBR4-207ENST00000425413 OR9G4Q8NGQ1 327 aa8.59□□□□□ -1.03
UBR4-207ENST00000425413 TMEM89A2RUT3 159 aa8.58□□□□□ -1.04
UBR4-207ENST00000425413 CDKN1BP46527 198 aa8.58□□□□□ -1.04
UBR4-207ENST00000425413 CST9LQ9H4G1 147 aa8.58□□□□□ -1.04
UBR4-207ENST00000425413 IGHV3-73A0A0B4J1V6 119 aa8.58□□□□□ -1.04
UBR4-207ENST00000425413 GAGE12BA1L429 117 aa8.58□□□□□ -1.04
UBR4-207ENST00000425413 EMP1P54849 157 aa8.58□□□□□ -1.04
UBR4-207ENST00000425413 ZNF56Q15929 161 aa8.58□□□□□ -1.04
UBR4-207ENST00000425413 SUMO4Q6EEV6 95 aa8.58□□□□□ -1.04
UBR4-207ENST00000425413 TMEM61Q8N0U2 210 aa8.58□□□□□ -1.04
UBR4-207ENST00000425413 DLX4Q92988 240 aaPredicted RBP8.58□□□□□ -1.04
UBR4-207ENST00000425413 ZNF256Q9Y2P7 627 aaPredicted RBP8.58□□□□□ -1.04
UBR4-207ENST00000425413 UNC79Q9P2D8 2635 aa8.58□□□□□ -1.04
UBR4-207ENST00000425413 C2orf66Q6UXQ4 117 aa8.58□□□□□ -1.04
UBR4-207ENST00000425413 JMJD8Q96S16 334 aa8.58□□□□□ -1.04
UBR4-207ENST00000425413 C2CD3Q4AC94 2353 aa8.57□□□□□ -1.04
UBR4-207ENST00000425413 IGHV3-16A0A0C4DH30 117 aa8.57□□□□□ -1.04
UBR4-207ENST00000425413 LINC00315P59091 139 aa8.57□□□□□ -1.04
UBR4-207ENST00000425413 VPS25Q9BRG1 176 aa8.57□□□□□ -1.04
UBR4-207ENST00000425413 IGHV1OR15-1A0A075B7D0 117 aa8.57□□□□□ -1.04
UBR4-207ENST00000425413 TRBV7-9A0A0J9YWB2 115 aa8.57□□□□□ -1.04
UBR4-207ENST00000425413 KIF25-AS1Q9Y6Z4 181 aa8.57□□□□□ -1.04
UBR4-207ENST00000425413 C9orf118A6NHY6 69 aa8.56□□□□□ -1.04
UBR4-207ENST00000425413 LINC01619G3V211 115 aa8.56□□□□□ -1.04
UBR4-207ENST00000425413 LGALS9O00182 355 aa8.56□□□□□ -1.04
UBR4-207ENST00000425413 RBMY1A1P0DJD3 496 aaKnown RBP8.56□□□□□ -1.04
UBR4-207ENST00000425413 RBMY1CP0DJD4 496 aa8.56□□□□□ -1.04
UBR4-207ENST00000425413 RPL39P62891 51 aaKnown RBP8.56□□□□□ -1.04
UBR4-207ENST00000425413 RBMY1FQ15415 496 aaKnown RBP8.56□□□□□ -1.04
UBR4-207ENST00000425413 H3BRM9 83 aa8.56□□□□□ -1.04
UBR4-207ENST00000425413 DUSP14O95147 198 aaKnown RBP8.56□□□□□ -1.04
UBR4-207ENST00000425413 ZNF876PQ49A33 203 aa8.56□□□□□ -1.04
UBR4-207ENST00000425413 ORMDL2Q53FV1 153 aa8.56□□□□□ -1.04
UBR4-207ENST00000425413 SAMD13Q5VXD3 122 aa8.56□□□□□ -1.04
UBR4-207ENST00000425413 LRRC75A-AS1Q8N1F1 130 aa8.56□□□□□ -1.04
UBR4-207ENST00000425413 DYNLRB2Q8TF09 96 aa8.56□□□□□ -1.04
UBR4-207ENST00000425413 C20orf78Q9BR46 151 aa8.56□□□□□ -1.04
UBR4-207ENST00000425413 K7ERJ3 54 aa8.55□□□□□ -1.04
UBR4-207ENST00000425413 MED14OSP0DP75 135 aa8.55□□□□□ -1.04
UBR4-207ENST00000425413 OCIAD2Q56VL3 154 aa8.55□□□□□ -1.04
UBR4-207ENST00000425413 Q6ZSV7 163 aa8.55□□□□□ -1.04
UBR4-207ENST00000425413 A0A087WX48 190 aa8.55□□□□□ -1.04
UBR4-207ENST00000425413 PRSS47A8MTI9 375 aa8.55□□□□□ -1.04
UBR4-207ENST00000425413 FXYD2P54710 66 aa8.55□□□□□ -1.04
UBR4-207ENST00000425413 CHAC1Q9BUX1 264 aa8.55□□□□□ -1.04
UBR4-207ENST00000425413 ZMAT4Q9H898 229 aa8.55□□□□□ -1.04
UBR4-207ENST00000425413 SDHAF1A6NFY7 115 aa8.55□□□□□ -1.04
UBR4-207ENST00000425413 DNAJC9-AS1A6NH13 148 aa8.55□□□□□ -1.04
UBR4-207ENST00000425413 SIVA1O15304 175 aa8.54□□□□□ -1.04
UBR4-207ENST00000425413 AMTNQ6UX39 209 aa8.54□□□□□ -1.04
UBR4-207ENST00000425413 FOXI2Q6ZQN5 318 aa8.54□□□□□ -1.04
UBR4-207ENST00000425413 GTF2H5Q6ZYL4 71 aa8.54□□□□□ -1.04
UBR4-207ENST00000425413 MAPKAPK5-AS1Q8N8E1 139 aa8.54□□□□□ -1.04
UBR4-207ENST00000425413 TOMM6Q96B49 74 aa8.54□□□□□ -1.04
UBR4-207ENST00000425413 ESM1Q9NQ30 184 aa8.54□□□□□ -1.04
UBR4-207ENST00000425413 TP53TG1Q9Y2A0 90 aa8.54□□□□□ -1.04
UBR4-207ENST00000425413 CHTOPQ9Y3Y2 248 aaKnown RBP8.54□□□□□ -1.04
UBR4-207ENST00000425413 TRBV25-1A0A075B6N4 114 aa8.54□□□□□ -1.04
UBR4-207ENST00000425413 NXPH4O95158 308 aa8.54□□□□□ -1.04
UBR4-207ENST00000425413 PDZD2O15018 2839 aa8.53□□□□□ -1.04
UBR4-207ENST00000425413 RBMY1BA6NDE4 496 aaKnown RBP8.53□□□□□ -1.04
UBR4-207ENST00000425413 RBMY1EA6NEQ0 496 aaKnown RBP8.53□□□□□ -1.04
UBR4-207ENST00000425413 RBMY1DP0C7P1 496 aaKnown RBP8.53□□□□□ -1.04
UBR4-207ENST00000425413 RNF152Q8N8N0 203 aa8.53□□□□□ -1.04
UBR4-207ENST00000425413 NHP2Q9NX24 153 aaKnown RBP8.53□□□□□ -1.04
UBR4-207ENST00000425413 SMIM13P0DJ93 91 aa8.53□□□□□ -1.04
UBR4-207ENST00000425413 P0DMU3 169 aa8.53□□□□□ -1.04
UBR4-207ENST00000425413 FAM231AP0DMU4 169 aa8.53□□□□□ -1.04
UBR4-207ENST00000425413 FAM231CP0DMU5 169 aa8.53□□□□□ -1.04
UBR4-207ENST00000425413 PROK1P58294 105 aa8.53□□□□□ -1.04
UBR4-207ENST00000425413 CD300EQ496F6 205 aaPredicted RBP8.53□□□□□ -1.04
UBR4-207ENST00000425413 BAALCQ8WXS3 180 aa8.53□□□□□ -1.04
UBR4-207ENST00000425413 C9orf85Q96MD7 179 aa8.53□□□□□ -1.04
UBR4-207ENST00000425413 YAE1D1Q9NRH1 226 aa8.53□□□□□ -1.04
UBR4-207ENST00000425413 NACAE9PAV3 2078 aa8.53□□□□□ -1.04
UBR4-207ENST00000425413 IGHV3OR16-12A0A075B7B8 117 aa8.52□□□□□ -1.04
UBR4-207ENST00000425413 PRSS29PA6NIE9 313 aa8.52□□□□□ -1.04
UBR4-207ENST00000425413 H7C1H1 209 aa8.52□□□□□ -1.04
UBR4-207ENST00000425413 SAP30O75446 220 aa8.52□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 115.2 ms